RNA–Protein interactions for RNA: ENST00000640148.1

CCNT1-206, Transcript of cyclin T1, humanhuman

TSL 5 BASIC

Gene CCNT1, Length 596 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-206ENST00000640148 AEBP2Q6ZN18 517 aaPredicted RBP20.54■□□□□ 0.88
CCNT1-206ENST00000640148 CHIC1Q5VXU3 224 aa19.04■□□□□ 0.64
CCNT1-206ENST00000640148 NISCHQ9Y2I1 1504 aa18.62■□□□□ 0.57
CCNT1-206ENST00000640148 SENP3Q9H4L4 574 aaPredicted RBP17.46■□□□□ 0.39
CCNT1-206ENST00000640148 PHF23Q9BUL5 403 aaPredicted RBP17.24■□□□□ 0.35
CCNT1-206ENST00000640148 ABCC9O60706 1549 aa16.85■□□□□ 0.29
CCNT1-206ENST00000640148 CCDC180Q9P1Z9 1646 aa16.74■□□□□ 0.27
CCNT1-206ENST00000640148 FOXD1Q16676 465 aa16.43■□□□□ 0.22
CCNT1-206ENST00000640148 RB1CC1Q8TDY2 1594 aa16.02■□□□□ 0.16
CCNT1-206ENST00000640148 DCAF8L2P0C7V8 631 aa16■□□□□ 0.15
CCNT1-206ENST00000640148 POTEDQ86YR6 584 aa15.99■□□□□ 0.15
CCNT1-206ENST00000640148 NACADO15069 1562 aa15.86■□□□□ 0.13
CCNT1-206ENST00000640148 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
CCNT1-206ENST00000640148 PABPN1Q86U42 306 aaKnown RBP eCLIP15.7■□□□□ 0.1
CCNT1-206ENST00000640148 UNC13AQ9UPW8 1703 aa15.54■□□□□ 0.08
CCNT1-206ENST00000640148 MYO15BQ96JP2 1530 aa15.54■□□□□ 0.08
CCNT1-206ENST00000640148 MSH5O43196 834 aa15.44■□□□□ 0.06
CCNT1-206ENST00000640148 BICRAQ9NZM4 1560 aa15.41■□□□□ 0.06
CCNT1-206ENST00000640148 ZCCHC6Q5VYS8 1495 aaKnown RBP15.4■□□□□ 0.06
CCNT1-206ENST00000640148 DCAF1Q9Y4B6 1507 aa15.34■□□□□ 0.05
CCNT1-206ENST00000640148 SCRIBQ14160 1630 aa15.31■□□□□ 0.04
CCNT1-206ENST00000640148 SHROOM4Q9ULL8 1493 aa15.27■□□□□ 0.04
CCNT1-206ENST00000640148 PIAS4Q8N2W9 510 aaPredicted RBP15.2■□□□□ 0.02
CCNT1-206ENST00000640148 CECR2Q9BXF3 1484 aa15.17■□□□□ 0.02
CCNT1-206ENST00000640148 CC2D2AQ9P2K1 1620 aa15.17■□□□□ 0.02
CCNT1-206ENST00000640148 EIF4G1Q04637 1599 aaKnown RBP15.11■□□□□ 0.01
CCNT1-206ENST00000640148 PPP6R1Q9UPN7 881 aa15.05■□□□□ -0
CCNT1-206ENST00000640148 ADRA2BP18089 450 aa14.96□□□□□ -0.01
CCNT1-206ENST00000640148 PLPPR3Q6T4P5 718 aa14.88□□□□□ -0.03
CCNT1-206ENST00000640148 ERCC6Q03468 1493 aa14.64□□□□□ -0.07
CCNT1-206ENST00000640148 NCAPD3P42695 1498 aa14.6□□□□□ -0.07
CCNT1-206ENST00000640148 SMARCA2P51531 1590 aa14.58□□□□□ -0.08
CCNT1-206ENST00000640148 ATAD2BQ9ULI0 1458 aa14.56□□□□□ -0.08
CCNT1-206ENST00000640148 SMARCA4P51532 1647 aa14.55□□□□□ -0.08
CCNT1-206ENST00000640148 DNAJC5Q9H3Z4 198 aa14.54□□□□□ -0.08
CCNT1-206ENST00000640148 BAZ1AQ9NRL2 1556 aaPredicted RBP14.51□□□□□ -0.09
CCNT1-206ENST00000640148 CUX2O14529 1486 aa14.51□□□□□ -0.09
CCNT1-206ENST00000640148 HMGXB3Q12766 1538 aa14.51□□□□□ -0.09
CCNT1-206ENST00000640148 BAZ1BQ9UIG0 1483 aaKnown RBP14.5□□□□□ -0.09
CCNT1-206ENST00000640148 NESP48681 1621 aa14.4□□□□□ -0.1
CCNT1-206ENST00000640148 PEG3Q9GZU2 1588 aa14.34□□□□□ -0.11
CCNT1-206ENST00000640148 MROH2BQ7Z745 1585 aa14.33□□□□□ -0.12
CCNT1-206ENST00000640148 LAMC3Q9Y6N6 1575 aa14.33□□□□□ -0.12
CCNT1-206ENST00000640148 PDS5BQ9NTI5 1447 aa14.31□□□□□ -0.12
CCNT1-206ENST00000640148 KIF21AQ7Z4S6 1674 aa14.23□□□□□ -0.13
CCNT1-206ENST00000640148 THOC2Q8NI27 1593 aaKnown RBP14.22□□□□□ -0.13
CCNT1-206ENST00000640148 CADPSQ9ULU8 1353 aa14.21□□□□□ -0.14
CCNT1-206ENST00000640148 WIZO95785 1651 aa14.2□□□□□ -0.14
CCNT1-206ENST00000640148 MRC2Q9UBG0 1479 aa14.14□□□□□ -0.15
CCNT1-206ENST00000640148 CEP164Q9UPV0 1460 aa14.11□□□□□ -0.15
CCNT1-206ENST00000640148 FANCD2Q9BXW9 1451 aa14.06□□□□□ -0.16
CCNT1-206ENST00000640148 TRIM41Q8WV44 630 aa14.05□□□□□ -0.16
CCNT1-206ENST00000640148 WDR62O43379 1518 aa14.05□□□□□ -0.16
CCNT1-206ENST00000640148 RSF1Q96T23 1441 aaPredicted RBP14.03□□□□□ -0.16
CCNT1-206ENST00000640148 TOP2AP11388 1531 aaKnown RBP14.01□□□□□ -0.17
CCNT1-206ENST00000640148 CFTRP13569 1480 aa13.99□□□□□ -0.17
CCNT1-206ENST00000640148 OSCARQ8IYS5 282 aa13.93□□□□□ -0.18
CCNT1-206ENST00000640148 MAPK8IP2Q13387 824 aaPredicted RBP13.91□□□□□ -0.18
CCNT1-206ENST00000640148 PRDM2Q13029 1718 aa13.88□□□□□ -0.19
CCNT1-206ENST00000640148 URB2Q14146 1524 aaKnown RBP13.88□□□□□ -0.19
CCNT1-206ENST00000640148 CCDC88BA6NC98 1476 aa13.86□□□□□ -0.19
CCNT1-206ENST00000640148 DMRT2Q9Y5R5 561 aa13.8□□□□□ -0.2
CCNT1-206ENST00000640148 IFT140Q96RY7 1462 aa13.8□□□□□ -0.2
CCNT1-206ENST00000640148 ABCC8Q09428 1581 aa13.79□□□□□ -0.2
CCNT1-206ENST00000640148 TOPBP1Q92547 1522 aa13.75□□□□□ -0.21
CCNT1-206ENST00000640148 FBLN2P98095 1184 aa13.74□□□□□ -0.21
CCNT1-206ENST00000640148 DNMBPQ6XZF7 1577 aa13.72□□□□□ -0.21
CCNT1-206ENST00000640148 ZNF608Q9ULD9 1512 aaPredicted RBP13.72□□□□□ -0.21
CCNT1-206ENST00000640148 EIF4G3O43432 1585 aaKnown RBP13.68□□□□□ -0.22
CCNT1-206ENST00000640148 RIMBP3CA6NJZ7 1639 aa13.65□□□□□ -0.22
CCNT1-206ENST00000640148 RIMBP3BA6NNM3 1639 aa13.65□□□□□ -0.22
CCNT1-206ENST00000640148 RIMBP3Q9UFD9 1639 aa13.65□□□□□ -0.22
CCNT1-206ENST00000640148 AQRO60306 1485 aaKnown RBP eCLIP13.65□□□□□ -0.224e-6■■■■□ 23.4
CCNT1-206ENST00000640148 CYB5RLQ6IPT4 315 aa13.62□□□□□ -0.23
CCNT1-206ENST00000640148 SOGA1O94964 1423 aa13.62□□□□□ -0.23
CCNT1-206ENST00000640148 ARHGEF11O15085 1522 aa13.61□□□□□ -0.23
CCNT1-206ENST00000640148 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
CCNT1-206ENST00000640148 POLA1P09884 1462 aaPredicted RBP13.61□□□□□ -0.23
CCNT1-206ENST00000640148 CHD1O14646 1710 aa13.6□□□□□ -0.23
CCNT1-206ENST00000640148 TRHP20396 242 aaPredicted RBP13.59□□□□□ -0.23
CCNT1-206ENST00000640148 TARBP1Q13395 1621 aaKnown RBP13.59□□□□□ -0.23
CCNT1-206ENST00000640148 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
CCNT1-206ENST00000640148 CHMP7Q8WUX9 453 aaPredicted RBP13.58□□□□□ -0.24
CCNT1-206ENST00000640148 TDRD9Q8NDG6 1382 aaKnown RBP13.58□□□□□ -0.24
CCNT1-206ENST00000640148 RAD54L2Q9Y4B4 1467 aa13.57□□□□□ -0.24
CCNT1-206ENST00000640148 FGD5Q6ZNL6 1462 aa13.55□□□□□ -0.24
CCNT1-206ENST00000640148 SCAF1Q9H7N4 1312 aaKnown RBP13.52□□□□□ -0.25
CCNT1-206ENST00000640148 SNAPC4Q5SXM2 1469 aa13.51□□□□□ -0.25
CCNT1-206ENST00000640148 WDR97A6NE52 1622 aa13.5□□□□□ -0.25
CCNT1-206ENST00000640148 SYNJ1O43426 1573 aa13.49□□□□□ -0.25
CCNT1-206ENST00000640148 GRIN2BQ13224 1484 aa13.48□□□□□ -0.25
CCNT1-206ENST00000640148 CUX1P39880 1505 aa13.48□□□□□ -0.25
CCNT1-206ENST00000640148 MAGI1Q96QZ7 1491 aaPredicted RBP13.48□□□□□ -0.25
CCNT1-206ENST00000640148 ARAP1Q96P48 1450 aa13.44□□□□□ -0.26
CCNT1-206ENST00000640148 SYNJ2O15056 1496 aa13.43□□□□□ -0.26
CCNT1-206ENST00000640148 GAPVD1Q14C86 1478 aa13.43□□□□□ -0.26
CCNT1-206ENST00000640148 PBRM1Q86U86 1689 aa13.41□□□□□ -0.26
CCNT1-206ENST00000640148 WRNQ14191 1432 aaPredicted RBP eCLIP13.39□□□□□ -0.27
CCNT1-206ENST00000640148 CLASP1Q7Z460 1538 aa13.38□□□□□ -0.27
CCNT1-206ENST00000640148 ABCA10Q8WWZ4 1543 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 9.1 ms