RNA–Protein interactions for RNA: ENST00000602582.5

TRIM11-206, Transcript of tripartite motif containing 11, humanhuman

TSL 3

Gene TRIM11, Length 682 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM11-206ENST00000602582 NISCHQ9Y2I1 1504 aa35.49■■■■□ 3.27
TRIM11-206ENST00000602582 CCDC180Q9P1Z9 1646 aa31.66■■■□□ 2.66
TRIM11-206ENST00000602582 ABCC9O60706 1549 aa31.02■■■□□ 2.56
TRIM11-206ENST00000602582 RB1CC1Q8TDY2 1594 aa29.81■■■□□ 2.36
TRIM11-206ENST00000602582 NACADO15069 1562 aa29.74■■■□□ 2.35
TRIM11-206ENST00000602582 ZCCHC6Q5VYS8 1495 aaKnown RBP29.56■■■□□ 2.32
TRIM11-206ENST00000602582 DCAF8L2P0C7V8 631 aa29.56■■■□□ 2.32
TRIM11-206ENST00000602582 MYO15BQ96JP2 1530 aa29.54■■■□□ 2.32
TRIM11-206ENST00000602582 DCAF1Q9Y4B6 1507 aa29.37■■■□□ 2.29
TRIM11-206ENST00000602582 UNC13AQ9UPW8 1703 aa29.23■■■□□ 2.27
TRIM11-206ENST00000602582 BICRAQ9NZM4 1560 aa28.96■■■□□ 2.23
TRIM11-206ENST00000602582 PABPN1Q86U42 306 aaKnown RBP eCLIP28.91■■■□□ 2.22
TRIM11-206ENST00000602582 SCRIBQ14160 1630 aa28.85■■■□□ 2.21
TRIM11-206ENST00000602582 DNAJC5BQ9UF47 199 aa28.69■■■□□ 2.18
TRIM11-206ENST00000602582 SHROOM4Q9ULL8 1493 aa28.6■■■□□ 2.17
TRIM11-206ENST00000602582 EIF4G1Q04637 1599 aaKnown RBP28.17■■■□□ 2.1
TRIM11-206ENST00000602582 CC2D2AQ9P2K1 1620 aa28.1■■■□□ 2.09
TRIM11-206ENST00000602582 CECR2Q9BXF3 1484 aa27.88■■■□□ 2.05
TRIM11-206ENST00000602582 SMARCA4P51532 1647 aa27.59■■■□□ 2.01
TRIM11-206ENST00000602582 BAZ1AQ9NRL2 1556 aaPredicted RBP27.52■■■□□ 2
TRIM11-206ENST00000602582 ATAD2BQ9ULI0 1458 aa27.44■■□□□ 1.98
TRIM11-206ENST00000602582 NCAPD3P42695 1498 aa27.43■■□□□ 1.98
TRIM11-206ENST00000602582 SMARCA2P51531 1590 aa27.4■■□□□ 1.98
TRIM11-206ENST00000602582 MROH2BQ7Z745 1585 aa27.36■■□□□ 1.97
TRIM11-206ENST00000602582 PEG3Q9GZU2 1588 aa27.33■■□□□ 1.97
TRIM11-206ENST00000602582 HMGXB3Q12766 1538 aa27.32■■□□□ 1.96
TRIM11-206ENST00000602582 BAZ1BQ9UIG0 1483 aaKnown RBP27.19■■□□□ 1.94
TRIM11-206ENST00000602582 WIZO95785 1651 aa27.08■■□□□ 1.92
TRIM11-206ENST00000602582 RSF1Q96T23 1441 aaPredicted RBP26.97■■□□□ 1.91
TRIM11-206ENST00000602582 NESP48681 1621 aa26.83■■□□□ 1.88
TRIM11-206ENST00000602582 TOP2AP11388 1531 aaKnown RBP26.77■■□□□ 1.88
TRIM11-206ENST00000602582 LAMC3Q9Y6N6 1575 aa26.75■■□□□ 1.87
TRIM11-206ENST00000602582 ERCC6Q03468 1493 aa26.72■■□□□ 1.87
TRIM11-206ENST00000602582 SUPT5HO00267 1087 aaKnown RBP26.64■■□□□ 1.86
TRIM11-206ENST00000602582 CADPSQ9ULU8 1353 aa26.59■■□□□ 1.85
TRIM11-206ENST00000602582 KIF21AQ7Z4S6 1674 aa26.56■■□□□ 1.84
TRIM11-206ENST00000602582 PDS5BQ9NTI5 1447 aa26.52■■□□□ 1.84
TRIM11-206ENST00000602582 CUX2O14529 1486 aa26.51■■□□□ 1.83
TRIM11-206ENST00000602582 THOC2Q8NI27 1593 aaKnown RBP26.5■■□□□ 1.83
TRIM11-206ENST00000602582 CFTRP13569 1480 aa26.44■■□□□ 1.82
TRIM11-206ENST00000602582 CCDC88BA6NC98 1476 aa26.42■■□□□ 1.82
TRIM11-206ENST00000602582 DNAJC5Q9H3Z4 198 aa26.38■■□□□ 1.81
TRIM11-206ENST00000602582 PRDM2Q13029 1718 aa26.34■■□□□ 1.81
TRIM11-206ENST00000602582 FANCD2Q9BXW9 1451 aa26.32■■□□□ 1.8
TRIM11-206ENST00000602582 CEP164Q9UPV0 1460 aa26.3■■□□□ 1.8
TRIM11-206ENST00000602582 MRC2Q9UBG0 1479 aa26.3■■□□□ 1.8
TRIM11-206ENST00000602582 WDR62O43379 1518 aa26.24■■□□□ 1.79
TRIM11-206ENST00000602582 URB2Q14146 1524 aaKnown RBP26.09■■□□□ 1.77
TRIM11-206ENST00000602582 TOPBP1Q92547 1522 aa25.9■■□□□ 1.74
TRIM11-206ENST00000602582 DNMBPQ6XZF7 1577 aa25.87■■□□□ 1.73
TRIM11-206ENST00000602582 ABCC8Q09428 1581 aa25.85■■□□□ 1.73
TRIM11-206ENST00000602582 IFT140Q96RY7 1462 aa25.74■■□□□ 1.71
TRIM11-206ENST00000602582 CUX1P39880 1505 aa25.68■■□□□ 1.7
TRIM11-206ENST00000602582 POLA1P09884 1462 aaPredicted RBP25.67■■□□□ 1.7
TRIM11-206ENST00000602582 CHIC1Q5VXU3 224 aa25.67■■□□□ 1.7
TRIM11-206ENST00000602582 ZNF608Q9ULD9 1512 aaPredicted RBP25.67■■□□□ 1.7
TRIM11-206ENST00000602582 TARBP1Q13395 1621 aaKnown RBP25.66■■□□□ 1.7
TRIM11-206ENST00000602582 EIF4G3O43432 1585 aaKnown RBP25.6■■□□□ 1.69
TRIM11-206ENST00000602582 FGD5Q6ZNL6 1462 aa25.59■■□□□ 1.69
TRIM11-206ENST00000602582 RAD54L2Q9Y4B4 1467 aa25.54■■□□□ 1.68
TRIM11-206ENST00000602582 SOGA1O94964 1423 aa25.52■■□□□ 1.68
TRIM11-206ENST00000602582 AQRO60306 1485 aaKnown RBP eCLIP25.47■■□□□ 1.671e-6■■■■■ 34.8
TRIM11-206ENST00000602582 WDR97A6NE52 1622 aa25.46■■□□□ 1.67
TRIM11-206ENST00000602582 BIVM-ERCC5R4GMW8 1640 aa25.45■■□□□ 1.67
TRIM11-206ENST00000602582 TOP2BQ02880 1626 aa25.43■■□□□ 1.66
TRIM11-206ENST00000602582 SYNJ1O43426 1573 aa25.43■■□□□ 1.66
TRIM11-206ENST00000602582 WRNQ14191 1432 aaPredicted RBP eCLIP25.42■■□□□ 1.66
TRIM11-206ENST00000602582 TDRD9Q8NDG6 1382 aaKnown RBP25.39■■□□□ 1.65
TRIM11-206ENST00000602582 ABCA10Q8WWZ4 1543 aa25.34■■□□□ 1.65
TRIM11-206ENST00000602582 CHD1O14646 1710 aa25.32■■□□□ 1.64
TRIM11-206ENST00000602582 OSCARQ8IYS5 282 aa25.31■■□□□ 1.64
TRIM11-206ENST00000602582 ABCA5Q8WWZ7 1642 aa25.3■■□□□ 1.64
TRIM11-206ENST00000602582 PBRM1Q86U86 1689 aa25.28■■□□□ 1.64
TRIM11-206ENST00000602582 SNAPC4Q5SXM2 1469 aa25.27■■□□□ 1.64
TRIM11-206ENST00000602582 GRIN2BQ13224 1484 aa25.26■■□□□ 1.63
TRIM11-206ENST00000602582 GAPVD1Q14C86 1478 aa25.24■■□□□ 1.63
TRIM11-206ENST00000602582 MAGI1Q96QZ7 1491 aaPredicted RBP25.21■■□□□ 1.63
TRIM11-206ENST00000602582 TRIM41Q8WV44 630 aa25.18■■□□□ 1.62
TRIM11-206ENST00000602582 SYNJ2O15056 1496 aa25.12■■□□□ 1.61
TRIM11-206ENST00000602582 FBLN2P98095 1184 aa25.11■■□□□ 1.61
TRIM11-206ENST00000602582 ADAMTS12P58397 1594 aa25.05■■□□□ 1.6
TRIM11-206ENST00000602582 CHMP7Q8WUX9 453 aaPredicted RBP25.04■■□□□ 1.6
TRIM11-206ENST00000602582 RIMBP3CA6NJZ7 1639 aa25.04■■□□□ 1.6
TRIM11-206ENST00000602582 RIMBP3BA6NNM3 1639 aa25.04■■□□□ 1.6
TRIM11-206ENST00000602582 RIMBP3Q9UFD9 1639 aa25.04■■□□□ 1.6
TRIM11-206ENST00000602582 ERICH3Q5RHP9 1530 aa25.03■■□□□ 1.6
TRIM11-206ENST00000602582 CLASP1Q7Z460 1538 aa25.02■■□□□ 1.6
TRIM11-206ENST00000602582 ARHGEF11O15085 1522 aa25■■□□□ 1.59
TRIM11-206ENST00000602582 GRIN2AQ12879 1464 aa24.95■■□□□ 1.58
TRIM11-206ENST00000602582 FHAD1B1AJZ9 1412 aa24.95■■□□□ 1.58
TRIM11-206ENST00000602582 KIF27Q86VH2 1401 aa24.88■■□□□ 1.57
TRIM11-206ENST00000602582 CEP170Q5SW79 1584 aa24.87■■□□□ 1.57
TRIM11-206ENST00000602582 NUP160Q12769 1436 aa24.85■■□□□ 1.57
TRIM11-206ENST00000602582 CUL7Q14999 1698 aa24.81■■□□□ 1.56
TRIM11-206ENST00000602582 ARAP1Q96P48 1450 aa24.8■■□□□ 1.56
TRIM11-206ENST00000602582 IGF1RP08069 1367 aa24.8■■□□□ 1.56
TRIM11-206ENST00000602582 SHROOM2Q13796 1616 aa24.72■■□□□ 1.55
TRIM11-206ENST00000602582 RUSC2Q8N2Y8 1516 aa24.7■■□□□ 1.54
TRIM11-206ENST00000602582 CYB5RLQ6IPT4 315 aa24.68■■□□□ 1.54
TRIM11-206ENST00000602582 ERCC6L2Q5T890 1561 aa24.67■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms