RNA–Protein interactions for RNA: ENST00000496420.5

PEX1-210, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 5,333 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-210ENST00000496420 DCAF8L2P0C7V8 631 aa15.75■□□□□ 0.11
PEX1-210ENST00000496420 NISCHQ9Y2I1 1504 aa14.52□□□□□ -0.09
PEX1-210ENST00000496420 FAM9AQ8IZU1 332 aaPredicted RBP14.49□□□□□ -0.09
PEX1-210ENST00000496420 SUPT5HO00267 1087 aaKnown RBP14.01□□□□□ -0.17
PEX1-210ENST00000496420 APLP2Q06481 763 aa13.85□□□□□ -0.19
PEX1-210ENST00000496420 SHROOM4Q9ULL8 1493 aa13.82□□□□□ -0.2
PEX1-210ENST00000496420 EHMT2Q96KQ7 1210 aa13.56□□□□□ -0.24
PEX1-210ENST00000496420 ATP1B4Q9UN42 357 aaPredicted RBP13.5□□□□□ -0.25
PEX1-210ENST00000496420 MYT1LQ9UL68 1186 aa13.48□□□□□ -0.25
PEX1-210ENST00000496420 RANGAP1P46060 587 aaPredicted RBP13.34□□□□□ -0.27
PEX1-210ENST00000496420 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.3□□□□□ -0.28
PEX1-210ENST00000496420 HNRNPUL2Q1KMD3 747 aaKnown RBP13.3□□□□□ -0.28
PEX1-210ENST00000496420 ABCC9O60706 1549 aa13.25□□□□□ -0.29
PEX1-210ENST00000496420 TTBK1Q5TCY1 1321 aaPredicted RBP13.24□□□□□ -0.29
PEX1-210ENST00000496420 UBTFP17480 764 aaKnown RBP13.17□□□□□ -0.3
PEX1-210ENST00000496420 TRIM41Q8WV44 630 aa13.15□□□□□ -0.3
PEX1-210ENST00000496420 PABPN1Q86U42 306 aaKnown RBP eCLIP13.15□□□□□ -0.31
PEX1-210ENST00000496420 FBLN2P98095 1184 aa13.02□□□□□ -0.32
PEX1-210ENST00000496420 CHIC1Q5VXU3 224 aa12.96□□□□□ -0.34
PEX1-210ENST00000496420 NPM1P06748 294 aaKnown RBP eCLIP12.9□□□□□ -0.34
PEX1-210ENST00000496420 ESF1Q9H501 851 aaKnown RBP12.87□□□□□ -0.35
PEX1-210ENST00000496420 PELP1Q8IZL8 1130 aaKnown RBP12.86□□□□□ -0.35
PEX1-210ENST00000496420 BCANQ96GW7 911 aa12.72□□□□□ -0.37
PEX1-210ENST00000496420 SLC4A1APQ9BWU0 796 aaKnown RBP12.69□□□□□ -0.38
PEX1-210ENST00000496420 PCGF6Q9BYE7 350 aa12.58□□□□□ -0.4
PEX1-210ENST00000496420 ITGAEP38570 1179 aa12.58□□□□□ -0.4
PEX1-210ENST00000496420 PLPPR3Q6T4P5 718 aa12.56□□□□□ -0.4
PEX1-210ENST00000496420 CDK11AQ9UQ88 783 aaPredicted RBP12.55□□□□□ -0.4
PEX1-210ENST00000496420 POLR3GLQ9BT43 218 aa12.54□□□□□ -0.4
PEX1-210ENST00000496420 STAG3Q9UJ98 1225 aa12.52□□□□□ -0.41
PEX1-210ENST00000496420 CCER1Q8TC90 406 aaPredicted RBP12.51□□□□□ -0.41
PEX1-210ENST00000496420 TRHP20396 242 aaPredicted RBP12.49□□□□□ -0.41
PEX1-210ENST00000496420 CHMP7Q8WUX9 453 aaPredicted RBP12.45□□□□□ -0.42
PEX1-210ENST00000496420 TRIM52Q96A61 297 aa12.42□□□□□ -0.42
PEX1-210ENST00000496420 FAM50AQ14320 339 aaKnown RBP12.38□□□□□ -0.43
PEX1-210ENST00000496420 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
PEX1-210ENST00000496420 ZNF777Q9ULD5 760 aaPredicted RBP12.33□□□□□ -0.44
PEX1-210ENST00000496420 ARID3CA6NKF2 412 aa12.33□□□□□ -0.44
PEX1-210ENST00000496420 ZEB1P37275 1124 aaPredicted RBP12.33□□□□□ -0.44
PEX1-210ENST00000496420 ARID4BQ4LE39 1312 aaPredicted RBP12.32□□□□□ -0.44
PEX1-210ENST00000496420 AEBP2Q6ZN18 517 aaPredicted RBP12.31□□□□□ -0.44
PEX1-210ENST00000496420 NEFMP07197 916 aa12.31□□□□□ -0.44
PEX1-210ENST00000496420 SLC24A1O60721 1099 aa12.31□□□□□ -0.44
PEX1-210ENST00000496420 SCRIBQ14160 1630 aa12.31□□□□□ -0.44
PEX1-210ENST00000496420 RB1CC1Q8TDY2 1594 aa12.27□□□□□ -0.44
PEX1-210ENST00000496420 CHGAP10645 457 aaKnown RBP12.27□□□□□ -0.45
PEX1-210ENST00000496420 NEFLP07196 543 aa12.27□□□□□ -0.45
PEX1-210ENST00000496420 C14orf37Q86TY3 774 aa12.24□□□□□ -0.45
PEX1-210ENST00000496420 P3H3Q8IVL6 736 aa12.24□□□□□ -0.45
PEX1-210ENST00000496420 PPARGC1BQ86YN6 1023 aaKnown RBP12.22□□□□□ -0.45
PEX1-210ENST00000496420 SCAF1Q9H7N4 1312 aaKnown RBP12.21□□□□□ -0.45
PEX1-210ENST00000496420 CNGB1Q14028 1251 aaPredicted RBP12.19□□□□□ -0.46
PEX1-210ENST00000496420 HAP1P54257 671 aaPredicted RBP12.17□□□□□ -0.46
PEX1-210ENST00000496420 ZNF326Q5BKZ1 582 aaKnown RBP12.17□□□□□ -0.46
PEX1-210ENST00000496420 PPP1R15AO75807 674 aaPredicted RBP12.15□□□□□ -0.46
PEX1-210ENST00000496420 ERICH6Q7L0X2 663 aa12.14□□□□□ -0.47
PEX1-210ENST00000496420 A0A0G2JS52 829 aa12.14□□□□□ -0.47
PEX1-210ENST00000496420 NPM2Q86SE8 214 aaKnown RBP12.14□□□□□ -0.47
PEX1-210ENST00000496420 ZBTB47Q9UFB7 747 aaPredicted RBP12.14□□□□□ -0.47
PEX1-210ENST00000496420 TSPY4P0CV99 314 aa12.12□□□□□ -0.47
PEX1-210ENST00000496420 TSPY10P0CW01 314 aa12.12□□□□□ -0.47
PEX1-210ENST00000496420 KCNH8Q96L42 1107 aa12.11□□□□□ -0.47
PEX1-210ENST00000496420 CENPBP07199 599 aaPredicted RBP12.11□□□□□ -0.47
PEX1-210ENST00000496420 PLEKHD1A6NEE1 506 aa12.07□□□□□ -0.48
PEX1-210ENST00000496420 DAXXQ9UER7 740 aaPredicted RBP12.04□□□□□ -0.48
PEX1-210ENST00000496420 CSRNP3Q8WYN3 585 aa12.04□□□□□ -0.48
PEX1-210ENST00000496420 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.01□□□□□ -0.49
PEX1-210ENST00000496420 NACADO15069 1562 aa11.99□□□□□ -0.49
PEX1-210ENST00000496420 MYT1Q01538 1121 aa11.98□□□□□ -0.49
PEX1-210ENST00000496420 NEUROD1Q13562 356 aa11.96□□□□□ -0.49
PEX1-210ENST00000496420 HDGFP51858 240 aaKnown RBP11.96□□□□□ -0.5
PEX1-210ENST00000496420 CLSPNQ9HAW4 1339 aa11.95□□□□□ -0.5
PEX1-210ENST00000496420 CCDC180Q9P1Z9 1646 aa11.94□□□□□ -0.5
PEX1-210ENST00000496420 BAZ1BQ9UIG0 1483 aaKnown RBP11.92□□□□□ -0.5
PEX1-210ENST00000496420 TRIM26Q12899 539 aaPredicted RBP11.92□□□□□ -0.5
PEX1-210ENST00000496420 ZBTB7CA1YPR0 619 aa11.91□□□□□ -0.5
PEX1-210ENST00000496420 PDS5BQ9NTI5 1447 aa11.89□□□□□ -0.51
PEX1-210ENST00000496420 PLEKHG5O94827 1062 aa11.88□□□□□ -0.51
PEX1-210ENST00000496420 LOC105371045A0A1W2PR82 267 aa11.86□□□□□ -0.51
PEX1-210ENST00000496420 MLECQ14165 292 aa11.86□□□□□ -0.51
PEX1-210ENST00000496420 CANXP27824 592 aaKnown RBP11.85□□□□□ -0.51
PEX1-210ENST00000496420 MTUS2Q5JR59 1369 aa11.85□□□□□ -0.51
PEX1-210ENST00000496420 LMOD2Q6P5Q4 547 aa11.85□□□□□ -0.51
PEX1-210ENST00000496420 OSCARQ8IYS5 282 aa11.83□□□□□ -0.52
PEX1-210ENST00000496420 SENP3Q9H4L4 574 aaPredicted RBP11.81□□□□□ -0.52
PEX1-210ENST00000496420 NPHP1O15259 732 aa11.8□□□□□ -0.52
PEX1-210ENST00000496420 YTHDC1Q96MU7 727 aaKnown RBP11.79□□□□□ -0.52
PEX1-210ENST00000496420 CECR2Q9BXF3 1484 aa11.79□□□□□ -0.52
PEX1-210ENST00000496420 DCAF8L1A6NGE4 600 aa11.79□□□□□ -0.52
PEX1-210ENST00000496420 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
PEX1-210ENST00000496420 CFDP1Q9UEE9 299 aaPredicted RBP11.76□□□□□ -0.53
PEX1-210ENST00000496420 RSF1Q96T23 1441 aaPredicted RBP11.75□□□□□ -0.53
PEX1-210ENST00000496420 CYB5RLQ6IPT4 315 aa11.75□□□□□ -0.53
PEX1-210ENST00000496420 CHIC2Q9UKJ5 165 aa11.75□□□□□ -0.53
PEX1-210ENST00000496420 ZCCHC6Q5VYS8 1495 aaKnown RBP11.74□□□□□ -0.53
PEX1-210ENST00000496420 BCL11AQ9H165 835 aa11.73□□□□□ -0.53
PEX1-210ENST00000496420 CARMIL2Q6F5E8 1435 aa11.73□□□□□ -0.53
PEX1-210ENST00000496420 FOXD1Q16676 465 aa11.72□□□□□ -0.53
PEX1-210ENST00000496420 ARXQ96QS3 562 aa11.72□□□□□ -0.53
PEX1-210ENST00000496420 KANK1Q14678 1352 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 209 ms