RNA–Protein interactions for RNA: ENST00000503979.1

APBB3-208, Transcript of amyloid beta precursor protein binding family B member 3, humanhuman

TSL 2

Gene APBB3, Length 875 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APBB3-208ENST00000503979 NISCHQ9Y2I1 1504 aa46.26■■■■■ 5
APBB3-208ENST00000503979 CCDC180Q9P1Z9 1646 aa41.16■■■■■ 4.18
APBB3-208ENST00000503979 ABCC9O60706 1549 aa40.07■■■■■ 4.01
APBB3-208ENST00000503979 NACADO15069 1562 aa38.69■■■■□ 3.78
APBB3-208ENST00000503979 RB1CC1Q8TDY2 1594 aa38.69■■■■□ 3.78
APBB3-208ENST00000503979 MYO15BQ96JP2 1530 aa38.58■■■■□ 3.77
APBB3-208ENST00000503979 ZCCHC6Q5VYS8 1495 aaKnown RBP38.55■■■■□ 3.76
APBB3-208ENST00000503979 DCAF8L2P0C7V8 631 aa38.42■■■■□ 3.74
APBB3-208ENST00000503979 DCAF1Q9Y4B6 1507 aa38.38■■■■□ 3.74
APBB3-208ENST00000503979 UNC13AQ9UPW8 1703 aa37.77■■■■□ 3.64
APBB3-208ENST00000503979 BICRAQ9NZM4 1560 aa37.51■■■■□ 3.59
APBB3-208ENST00000503979 PABPN1Q86U42 306 aaKnown RBP eCLIP37.41■■■■□ 3.58
APBB3-208ENST00000503979 SCRIBQ14160 1630 aa37.4■■■■□ 3.58
APBB3-208ENST00000503979 SHROOM4Q9ULL8 1493 aa37.26■■■■□ 3.55
APBB3-208ENST00000503979 DNAJC5BQ9UF47 199 aa36.76■■■■□ 3.48
APBB3-208ENST00000503979 EIF4G1Q04637 1599 aaKnown RBP36.5■■■■□ 3.43
APBB3-208ENST00000503979 CC2D2AQ9P2K1 1620 aa36.32■■■■□ 3.4
APBB3-208ENST00000503979 CECR2Q9BXF3 1484 aa36.06■■■■□ 3.36
APBB3-208ENST00000503979 SMARCA4P51532 1647 aa35.87■■■■□ 3.33
APBB3-208ENST00000503979 BAZ1AQ9NRL2 1556 aaPredicted RBP35.87■■■■□ 3.33
APBB3-208ENST00000503979 NCAPD3P42695 1498 aa35.71■■■■□ 3.31
APBB3-208ENST00000503979 ATAD2BQ9ULI0 1458 aa35.67■■■■□ 3.3
APBB3-208ENST00000503979 SMARCA2P51531 1590 aa35.66■■■■□ 3.3
APBB3-208ENST00000503979 PEG3Q9GZU2 1588 aa35.62■■■■□ 3.29
APBB3-208ENST00000503979 MROH2BQ7Z745 1585 aa35.6■■■■□ 3.29
APBB3-208ENST00000503979 HMGXB3Q12766 1538 aa35.53■■■■□ 3.28
APBB3-208ENST00000503979 BAZ1BQ9UIG0 1483 aaKnown RBP35.35■■■■□ 3.25
APBB3-208ENST00000503979 RSF1Q96T23 1441 aaPredicted RBP35.23■■■■□ 3.23
APBB3-208ENST00000503979 WIZO95785 1651 aa35.2■■■■□ 3.23
APBB3-208ENST00000503979 TOP2AP11388 1531 aaKnown RBP34.89■■■■□ 3.18
APBB3-208ENST00000503979 LAMC3Q9Y6N6 1575 aa34.74■■■■□ 3.15
APBB3-208ENST00000503979 NESP48681 1621 aa34.7■■■■□ 3.14
APBB3-208ENST00000503979 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
APBB3-208ENST00000503979 ERCC6Q03468 1493 aa34.55■■■■□ 3.12
APBB3-208ENST00000503979 PDS5BQ9NTI5 1447 aa34.48■■■■□ 3.11
APBB3-208ENST00000503979 CCDC88BA6NC98 1476 aa34.45■■■■□ 3.1
APBB3-208ENST00000503979 CFTRP13569 1480 aa34.45■■■■□ 3.1
APBB3-208ENST00000503979 KIF21AQ7Z4S6 1674 aa34.31■■■■□ 3.08
APBB3-208ENST00000503979 CUX2O14529 1486 aa34.29■■■■□ 3.08
APBB3-208ENST00000503979 THOC2Q8NI27 1593 aaKnown RBP34.24■■■■□ 3.07
APBB3-208ENST00000503979 SUPT5HO00267 1087 aaKnown RBP34.2■■■■□ 3.07
APBB3-208ENST00000503979 FANCD2Q9BXW9 1451 aa34.19■■■■□ 3.06
APBB3-208ENST00000503979 PRDM2Q13029 1718 aa34.18■■■■□ 3.06
APBB3-208ENST00000503979 CEP164Q9UPV0 1460 aa34.14■■■■□ 3.06
APBB3-208ENST00000503979 MRC2Q9UBG0 1479 aa34.1■■■■□ 3.05
APBB3-208ENST00000503979 WDR62O43379 1518 aa34.03■■■■□ 3.04
APBB3-208ENST00000503979 URB2Q14146 1524 aaKnown RBP33.84■■■■□ 3.01
APBB3-208ENST00000503979 ABCC8Q09428 1581 aa33.74■■■□□ 2.99
APBB3-208ENST00000503979 TOPBP1Q92547 1522 aa33.66■■■□□ 2.98
APBB3-208ENST00000503979 DNMBPQ6XZF7 1577 aa33.64■■■□□ 2.98
APBB3-208ENST00000503979 IFT140Q96RY7 1462 aa33.47■■■□□ 2.95
APBB3-208ENST00000503979 CUX1P39880 1505 aa33.4■■■□□ 2.94
APBB3-208ENST00000503979 POLA1P09884 1462 aaPredicted RBP33.37■■■□□ 2.93
APBB3-208ENST00000503979 TARBP1Q13395 1621 aaKnown RBP33.31■■■□□ 2.92
APBB3-208ENST00000503979 FGD5Q6ZNL6 1462 aa33.27■■■□□ 2.92
APBB3-208ENST00000503979 ZNF608Q9ULD9 1512 aaPredicted RBP33.23■■■□□ 2.91
APBB3-208ENST00000503979 SOGA1O94964 1423 aa33.22■■■□□ 2.91
APBB3-208ENST00000503979 WRNQ14191 1432 aaPredicted RBP eCLIP33.21■■■□□ 2.91
APBB3-208ENST00000503979 BIVM-ERCC5R4GMW8 1640 aa33.17■■■□□ 2.9
APBB3-208ENST00000503979 RAD54L2Q9Y4B4 1467 aa33.17■■■□□ 2.9
APBB3-208ENST00000503979 TOP2BQ02880 1626 aa33.17■■■□□ 2.9
APBB3-208ENST00000503979 WDR97A6NE52 1622 aa33.15■■■□□ 2.9
APBB3-208ENST00000503979 DNAJC5Q9H3Z4 198 aa33.15■■■□□ 2.9
APBB3-208ENST00000503979 EIF4G3O43432 1585 aaKnown RBP33.14■■■□□ 2.9
APBB3-208ENST00000503979 SYNJ1O43426 1573 aa33.1■■■□□ 2.89
APBB3-208ENST00000503979 AQRO60306 1485 aaKnown RBP eCLIP33.05■■■□□ 2.882e-6■■■■□ 22.7
APBB3-208ENST00000503979 ABCA10Q8WWZ4 1543 aa33.02■■■□□ 2.88
APBB3-208ENST00000503979 TDRD9Q8NDG6 1382 aaKnown RBP32.98■■■□□ 2.87
APBB3-208ENST00000503979 ABCA5Q8WWZ7 1642 aa32.87■■■□□ 2.85
APBB3-208ENST00000503979 GRIN2BQ13224 1484 aa32.86■■■□□ 2.85
APBB3-208ENST00000503979 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
APBB3-208ENST00000503979 OSCARQ8IYS5 282 aa32.82■■■□□ 2.84
APBB3-208ENST00000503979 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
APBB3-208ENST00000503979 PBRM1Q86U86 1689 aa32.76■■■□□ 2.84
APBB3-208ENST00000503979 SNAPC4Q5SXM2 1469 aa32.76■■■□□ 2.84
APBB3-208ENST00000503979 CHD1O14646 1710 aa32.68■■■□□ 2.82
APBB3-208ENST00000503979 SYNJ2O15056 1496 aa32.65■■■□□ 2.82
APBB3-208ENST00000503979 ERICH3Q5RHP9 1530 aa32.64■■■□□ 2.82
APBB3-208ENST00000503979 CHMP7Q8WUX9 453 aaPredicted RBP32.57■■■□□ 2.8
APBB3-208ENST00000503979 FBLN2P98095 1184 aa32.56■■■□□ 2.8
APBB3-208ENST00000503979 KIF27Q86VH2 1401 aa32.53■■■□□ 2.8
APBB3-208ENST00000503979 ADAMTS12P58397 1594 aa32.53■■■□□ 2.8
APBB3-208ENST00000503979 FHAD1B1AJZ9 1412 aa32.5■■■□□ 2.79
APBB3-208ENST00000503979 GRIN2AQ12879 1464 aa32.43■■■□□ 2.78
APBB3-208ENST00000503979 CLASP1Q7Z460 1538 aa32.41■■■□□ 2.78
APBB3-208ENST00000503979 IGF1RP08069 1367 aa32.39■■■□□ 2.78
APBB3-208ENST00000503979 TRIM41Q8WV44 630 aa32.38■■■□□ 2.77
APBB3-208ENST00000503979 CUL7Q14999 1698 aa32.33■■■□□ 2.77
APBB3-208ENST00000503979 NUP160Q12769 1436 aa32.32■■■□□ 2.76
APBB3-208ENST00000503979 ARHGEF11O15085 1522 aa32.28■■■□□ 2.76
APBB3-208ENST00000503979 RIMBP3CA6NJZ7 1639 aa32.27■■■□□ 2.76
APBB3-208ENST00000503979 RIMBP3BA6NNM3 1639 aa32.27■■■□□ 2.76
APBB3-208ENST00000503979 RIMBP3Q9UFD9 1639 aa32.27■■■□□ 2.76
APBB3-208ENST00000503979 CEP170Q5SW79 1584 aa32.24■■■□□ 2.75
APBB3-208ENST00000503979 CARMIL1Q5VZK9 1371 aa32.18■■■□□ 2.74
APBB3-208ENST00000503979 RUSC2Q8N2Y8 1516 aa32.16■■■□□ 2.74
APBB3-208ENST00000503979 SHROOM2Q13796 1616 aa32.08■■■□□ 2.73
APBB3-208ENST00000503979 CHIC1Q5VXU3 224 aa32.03■■■□□ 2.72
APBB3-208ENST00000503979 ARAP1Q96P48 1450 aa32.02■■■□□ 2.72
APBB3-208ENST00000503979 RAPGEF2Q9Y4G8 1499 aa32.02■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 890.4 ms