RNA–Protein interactions for RNA: ENST00000551661.5

CNOT2-232, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 4

Gene CNOT2, Length 571 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-232ENST00000551661 NISCHQ9Y2I1 1504 aa20.81■□□□□ 0.92
CNOT2-232ENST00000551661 AEBP2Q6ZN18 517 aaPredicted RBP18.62■□□□□ 0.57
CNOT2-232ENST00000551661 CCDC180Q9P1Z9 1646 aa18.21■□□□□ 0.51
CNOT2-232ENST00000551661 CHIC1Q5VXU3 224 aa18.05■□□□□ 0.48
CNOT2-232ENST00000551661 ZCCHC6Q5VYS8 1495 aaKnown RBP17.56■□□□□ 0.4
CNOT2-232ENST00000551661 DCAF1Q9Y4B6 1507 aa17.26■□□□□ 0.35
CNOT2-232ENST00000551661 MYO15BQ96JP2 1530 aa17■□□□□ 0.31
CNOT2-232ENST00000551661 SHROOM4Q9ULL8 1493 aa16.94■□□□□ 0.3
CNOT2-232ENST00000551661 DCAF8L2P0C7V8 631 aa16.84■□□□□ 0.29
CNOT2-232ENST00000551661 ABCC9O60706 1549 aa16.84■□□□□ 0.29
CNOT2-232ENST00000551661 NACADO15069 1562 aa16.81■□□□□ 0.28
CNOT2-232ENST00000551661 SCRIBQ14160 1630 aa16.66■□□□□ 0.26
CNOT2-232ENST00000551661 RB1CC1Q8TDY2 1594 aa16.62■□□□□ 0.25
CNOT2-232ENST00000551661 UNC13AQ9UPW8 1703 aa16.43■□□□□ 0.22
CNOT2-232ENST00000551661 SUPT5HO00267 1087 aaKnown RBP16.33■□□□□ 0.2
CNOT2-232ENST00000551661 RSF1Q96T23 1441 aaPredicted RBP16.16■□□□□ 0.18
CNOT2-232ENST00000551661 BICRAQ9NZM4 1560 aa16.14■□□□□ 0.17
CNOT2-232ENST00000551661 CECR2Q9BXF3 1484 aa16.1■□□□□ 0.17
CNOT2-232ENST00000551661 MROH2BQ7Z745 1585 aa16.07■□□□□ 0.16
CNOT2-232ENST00000551661 BAZ1AQ9NRL2 1556 aaPredicted RBP16.07■□□□□ 0.16
CNOT2-232ENST00000551661 SMARCA4P51532 1647 aa16.01■□□□□ 0.15
CNOT2-232ENST00000551661 WIZO95785 1651 aa15.99■□□□□ 0.15
CNOT2-232ENST00000551661 PHF23Q9BUL5 403 aaPredicted RBP15.91■□□□□ 0.14
CNOT2-232ENST00000551661 TOP2AP11388 1531 aaKnown RBP15.84■□□□□ 0.13
CNOT2-232ENST00000551661 PEG3Q9GZU2 1588 aa15.83■□□□□ 0.12
CNOT2-232ENST00000551661 PABPN1Q86U42 306 aaKnown RBP eCLIP15.81■□□□□ 0.12
CNOT2-232ENST00000551661 EIF4G1Q04637 1599 aaKnown RBP15.74■□□□□ 0.11
CNOT2-232ENST00000551661 SENP3Q9H4L4 574 aaPredicted RBP15.72■□□□□ 0.11
CNOT2-232ENST00000551661 SMARCA2P51531 1590 aa15.7■□□□□ 0.1
CNOT2-232ENST00000551661 ATAD2BQ9ULI0 1458 aa15.62■□□□□ 0.09
CNOT2-232ENST00000551661 CCDC88BA6NC98 1476 aa15.59■□□□□ 0.09
CNOT2-232ENST00000551661 BAZ1BQ9UIG0 1483 aaKnown RBP15.55■□□□□ 0.08
CNOT2-232ENST00000551661 HMGXB3Q12766 1538 aa15.54■□□□□ 0.08
CNOT2-232ENST00000551661 NCAPD3P42695 1498 aa15.46■□□□□ 0.06
CNOT2-232ENST00000551661 ABCC8Q09428 1581 aa15.36■□□□□ 0.05
CNOT2-232ENST00000551661 TRIM41Q8WV44 630 aa15.36■□□□□ 0.05
CNOT2-232ENST00000551661 CC2D2AQ9P2K1 1620 aa15.33■□□□□ 0.04
CNOT2-232ENST00000551661 PRDM2Q13029 1718 aa15.33■□□□□ 0.04
CNOT2-232ENST00000551661 SYNJ1O43426 1573 aa15.22■□□□□ 0.03
CNOT2-232ENST00000551661 WRNQ14191 1432 aaPredicted RBP eCLIP15.2■□□□□ 0.02
CNOT2-232ENST00000551661 BIVM-ERCC5R4GMW8 1640 aa15.19■□□□□ 0.02
CNOT2-232ENST00000551661 CFTRP13569 1480 aa15.17■□□□□ 0.02
CNOT2-232ENST00000551661 TOP2BQ02880 1626 aa15.16■□□□□ 0.02
CNOT2-232ENST00000551661 LOC105371045A0A1W2PR82 267 aa15.13■□□□□ 0.01
CNOT2-232ENST00000551661 EEA1Q15075 1411 aa15.12■□□□□ 0.01
CNOT2-232ENST00000551661 FAM9AQ8IZU1 332 aaPredicted RBP15.05■□□□□ -0
CNOT2-232ENST00000551661 SOGA1O94964 1423 aa15.04■□□□□ -0
CNOT2-232ENST00000551661 CUX1P39880 1505 aa15.03■□□□□ -0
CNOT2-232ENST00000551661 CADPSQ9ULU8 1353 aa15.02■□□□□ -0
CNOT2-232ENST00000551661 KIF21BO75037 1637 aa14.99□□□□□ -0.01
CNOT2-232ENST00000551661 RUSC2Q8N2Y8 1516 aa14.99□□□□□ -0.01
CNOT2-232ENST00000551661 LAMC3Q9Y6N6 1575 aa14.97□□□□□ -0.01
CNOT2-232ENST00000551661 GOLGA3Q08378 1498 aa14.91□□□□□ -0.02
CNOT2-232ENST00000551661 FANCD2Q9BXW9 1451 aa14.9□□□□□ -0.02
CNOT2-232ENST00000551661 CEP164Q9UPV0 1460 aa14.89□□□□□ -0.03
CNOT2-232ENST00000551661 CSRNP3Q8WYN3 585 aa14.89□□□□□ -0.03
CNOT2-232ENST00000551661 DNMBPQ6XZF7 1577 aa14.88□□□□□ -0.03
CNOT2-232ENST00000551661 NESP48681 1621 aa14.87□□□□□ -0.03
CNOT2-232ENST00000551661 TNIKQ9UKE5 1360 aa14.85□□□□□ -0.03
CNOT2-232ENST00000551661 ERICH3Q5RHP9 1530 aa14.84□□□□□ -0.03
CNOT2-232ENST00000551661 KIF21AQ7Z4S6 1674 aa14.82□□□□□ -0.04
CNOT2-232ENST00000551661 FGD5Q6ZNL6 1462 aa14.82□□□□□ -0.04
CNOT2-232ENST00000551661 CEP162Q5TB80 1403 aa14.81□□□□□ -0.04
CNOT2-232ENST00000551661 KIF27Q86VH2 1401 aa14.79□□□□□ -0.04
CNOT2-232ENST00000551661 TOPBP1Q92547 1522 aa14.79□□□□□ -0.04
CNOT2-232ENST00000551661 EHMT2Q96KQ7 1210 aa14.79□□□□□ -0.04
CNOT2-232ENST00000551661 WDR97A6NE52 1622 aa14.78□□□□□ -0.04
CNOT2-232ENST00000551661 PRXQ9BXM0 1461 aa14.78□□□□□ -0.04
CNOT2-232ENST00000551661 RAPGEF2Q9Y4G8 1499 aa14.76□□□□□ -0.05
CNOT2-232ENST00000551661 PDS5BQ9NTI5 1447 aa14.74□□□□□ -0.05
CNOT2-232ENST00000551661 URB2Q14146 1524 aaKnown RBP14.73□□□□□ -0.05
CNOT2-232ENST00000551661 CUX2O14529 1486 aa14.72□□□□□ -0.05
CNOT2-232ENST00000551661 POLA1P09884 1462 aaPredicted RBP14.72□□□□□ -0.05
CNOT2-232ENST00000551661 ABCA10Q8WWZ4 1543 aa14.71□□□□□ -0.05
CNOT2-232ENST00000551661 DNAJC5BQ9UF47 199 aa14.71□□□□□ -0.05
CNOT2-232ENST00000551661 UBTFP17480 764 aaKnown RBP14.67□□□□□ -0.06
CNOT2-232ENST00000551661 CUL7Q14999 1698 aa14.65□□□□□ -0.06
CNOT2-232ENST00000551661 FOXD1Q16676 465 aa14.65□□□□□ -0.06
CNOT2-232ENST00000551661 ABCA5Q8WWZ7 1642 aa14.65□□□□□ -0.06
CNOT2-232ENST00000551661 CLIP1P30622 1438 aa14.64□□□□□ -0.07
CNOT2-232ENST00000551661 TRIM26Q12899 539 aaPredicted RBP14.63□□□□□ -0.07
CNOT2-232ENST00000551661 RAD54L2Q9Y4B4 1467 aa14.63□□□□□ -0.07
CNOT2-232ENST00000551661 PCGF6Q9BYE7 350 aa14.62□□□□□ -0.07
CNOT2-232ENST00000551661 TARBP1Q13395 1621 aaKnown RBP14.61□□□□□ -0.07
CNOT2-232ENST00000551661 MRC2Q9UBG0 1479 aa14.61□□□□□ -0.07
CNOT2-232ENST00000551661 IGF1RP08069 1367 aa14.6□□□□□ -0.07
CNOT2-232ENST00000551661 VPS8Q8N3P4 1428 aa14.57□□□□□ -0.08
CNOT2-232ENST00000551661 WDR62O43379 1518 aa14.56□□□□□ -0.08
CNOT2-232ENST00000551661 CTTNBP2Q8WZ74 1663 aa14.56□□□□□ -0.08
CNOT2-232ENST00000551661 PLPPR3Q6T4P5 718 aa14.56□□□□□ -0.08
CNOT2-232ENST00000551661 PBRM1Q86U86 1689 aa14.55□□□□□ -0.08
CNOT2-232ENST00000551661 CARMIL1Q5VZK9 1371 aa14.54□□□□□ -0.08
CNOT2-232ENST00000551661 ARAP1Q96P48 1450 aa14.54□□□□□ -0.08
CNOT2-232ENST00000551661 THOC2Q8NI27 1593 aaKnown RBP14.52□□□□□ -0.08
CNOT2-232ENST00000551661 GAPVD1Q14C86 1478 aa14.49□□□□□ -0.09
CNOT2-232ENST00000551661 ARHGAP35Q9NRY4 1499 aa14.47□□□□□ -0.09
CNOT2-232ENST00000551661 IFT140Q96RY7 1462 aa14.44□□□□□ -0.1
CNOT2-232ENST00000551661 ADAMTS12P58397 1594 aa14.44□□□□□ -0.1
CNOT2-232ENST00000551661 EFCAB5A4FU69 1503 aa14.43□□□□□ -0.1
CNOT2-232ENST00000551661 HRCP23327 699 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms