RNA–Protein interactions for RNA: ENST00000248633.8

PEX1-201, Transcript of peroxisomal biogenesis factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PEX1, Length 4,385 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-201ENST00000248633 NISCHQ9Y2I1 1504 aa26.24■■□□□ 1.79
PEX1-201ENST00000248633 DCAF8L2P0C7V8 631 aa23.61■■□□□ 1.37
PEX1-201ENST00000248633 SHROOM4Q9ULL8 1493 aa22.89■■□□□ 1.26
PEX1-201ENST00000248633 SUPT5HO00267 1087 aaKnown RBP22.6■■□□□ 1.21
PEX1-201ENST00000248633 CCDC180Q9P1Z9 1646 aa22.25■■□□□ 1.15
PEX1-201ENST00000248633 ABCC9O60706 1549 aa22.01■■□□□ 1.11
PEX1-201ENST00000248633 ZCCHC6Q5VYS8 1495 aaKnown RBP21.92■■□□□ 1.1
PEX1-201ENST00000248633 PCGF6Q9BYE7 350 aa21.86■■□□□ 1.09
PEX1-201ENST00000248633 EHMT2Q96KQ7 1210 aa21.58■■□□□ 1.05
PEX1-201ENST00000248633 HRCP23327 699 aa21.41■■□□□ 1.02
PEX1-201ENST00000248633 PPARGC1BQ86YN6 1023 aaKnown RBP21.36■■□□□ 1.01
PEX1-201ENST00000248633 SCRIBQ14160 1630 aa21.28■■□□□ 1
PEX1-201ENST00000248633 DCAF1Q9Y4B6 1507 aa21.23■□□□□ 0.99
PEX1-201ENST00000248633 PABPN1Q86U42 306 aaKnown RBP eCLIP21.22■□□□□ 0.99
PEX1-201ENST00000248633 FAM9AQ8IZU1 332 aaPredicted RBP21.18■□□□□ 0.98
PEX1-201ENST00000248633 NACADO15069 1562 aa21.09■□□□□ 0.97
PEX1-201ENST00000248633 CHIC1Q5VXU3 224 aa21.08■□□□□ 0.97
PEX1-201ENST00000248633 LOC105371045A0A1W2PR82 267 aa21.04■□□□□ 0.96
PEX1-201ENST00000248633 RB1CC1Q8TDY2 1594 aa21.03■□□□□ 0.96
PEX1-201ENST00000248633 TRIM41Q8WV44 630 aa20.93■□□□□ 0.94
PEX1-201ENST00000248633 TTBK1Q5TCY1 1321 aaPredicted RBP20.92■□□□□ 0.94
PEX1-201ENST00000248633 MYO15BQ96JP2 1530 aa20.82■□□□□ 0.92
PEX1-201ENST00000248633 TRIM26Q12899 539 aaPredicted RBP20.76■□□□□ 0.91
PEX1-201ENST00000248633 ZEB1P37275 1124 aaPredicted RBP20.68■□□□□ 0.9
PEX1-201ENST00000248633 PELP1Q8IZL8 1130 aaKnown RBP20.66■□□□□ 0.9
PEX1-201ENST00000248633 RSF1Q96T23 1441 aaPredicted RBP20.65■□□□□ 0.9
PEX1-201ENST00000248633 CCER1Q8TC90 406 aaPredicted RBP20.62■□□□□ 0.89
PEX1-201ENST00000248633 CECR2Q9BXF3 1484 aa20.57■□□□□ 0.88
PEX1-201ENST00000248633 YTHDC1Q96MU7 727 aaKnown RBP20.46■□□□□ 0.87
PEX1-201ENST00000248633 CENPBP07199 599 aaPredicted RBP20.45■□□□□ 0.86
PEX1-201ENST00000248633 MROH2BQ7Z745 1585 aa20.35■□□□□ 0.85
PEX1-201ENST00000248633 BAZ1AQ9NRL2 1556 aaPredicted RBP20.35■□□□□ 0.85
PEX1-201ENST00000248633 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.31■□□□□ 0.84
PEX1-201ENST00000248633 UBTFP17480 764 aaKnown RBP20.27■□□□□ 0.84
PEX1-201ENST00000248633 RANGAP1P46060 587 aaPredicted RBP20.24■□□□□ 0.83
PEX1-201ENST00000248633 WIZO95785 1651 aa20.12■□□□□ 0.81
PEX1-201ENST00000248633 BAZ1BQ9UIG0 1483 aaKnown RBP20.09■□□□□ 0.81
PEX1-201ENST00000248633 SCAF1Q9H7N4 1312 aaKnown RBP20.08■□□□□ 0.81
PEX1-201ENST00000248633 GTF3C3Q9Y5Q9 886 aa20.08■□□□□ 0.8
PEX1-201ENST00000248633 APLP2Q06481 763 aa20.07■□□□□ 0.8
PEX1-201ENST00000248633 DIEXFQ68CQ4 756 aaKnown RBP20.06■□□□□ 0.8
PEX1-201ENST00000248633 SMARCA4P51532 1647 aa20.01■□□□□ 0.79
PEX1-201ENST00000248633 CCDC88BA6NC98 1476 aa19.94■□□□□ 0.78
PEX1-201ENST00000248633 ACIN1Q9UKV3 1341 aaKnown RBP19.91■□□□□ 0.78
PEX1-201ENST00000248633 TOP2AP11388 1531 aaKnown RBP19.91■□□□□ 0.78
PEX1-201ENST00000248633 HNRNPUL2Q1KMD3 747 aaKnown RBP19.89■□□□□ 0.77
PEX1-201ENST00000248633 SMARCA2P51531 1590 aa19.87■□□□□ 0.77
PEX1-201ENST00000248633 MYT1Q01538 1121 aa19.87■□□□□ 0.77
PEX1-201ENST00000248633 CSRNP3Q8WYN3 585 aa19.86■□□□□ 0.77
PEX1-201ENST00000248633 ATAD2BQ9ULI0 1458 aa19.86■□□□□ 0.77
PEX1-201ENST00000248633 NEUROD1Q13562 356 aa19.86■□□□□ 0.77
PEX1-201ENST00000248633 BICRAQ9NZM4 1560 aa19.84■□□□□ 0.77
PEX1-201ENST00000248633 ATP1B4Q9UN42 357 aaPredicted RBP19.78■□□□□ 0.76
PEX1-201ENST00000248633 UNC13AQ9UPW8 1703 aa19.78■□□□□ 0.76
PEX1-201ENST00000248633 WRNQ14191 1432 aaPredicted RBP eCLIP19.75■□□□□ 0.75
PEX1-201ENST00000248633 ABCC8Q09428 1581 aa19.69■□□□□ 0.74
PEX1-201ENST00000248633 EIF4G1Q04637 1599 aaKnown RBP19.64■□□□□ 0.73
PEX1-201ENST00000248633 ITGAEP38570 1179 aa19.57■□□□□ 0.72
PEX1-201ENST00000248633 ZNF316A6NFI3 1004 aaPredicted RBP19.55■□□□□ 0.72
PEX1-201ENST00000248633 SOGA1O94964 1423 aa19.54■□□□□ 0.72
PEX1-201ENST00000248633 NCAPD3P42695 1498 aa19.53■□□□□ 0.72
PEX1-201ENST00000248633 EEA1Q15075 1411 aa19.5■□□□□ 0.71
PEX1-201ENST00000248633 BCANQ96GW7 911 aa19.44■□□□□ 0.7
PEX1-201ENST00000248633 CADPSQ9ULU8 1353 aa19.43■□□□□ 0.7
PEX1-201ENST00000248633 ERICH6Q7L0X2 663 aa19.41■□□□□ 0.7
PEX1-201ENST00000248633 NEFLP07196 543 aa19.41■□□□□ 0.7
PEX1-201ENST00000248633 GOLGA3Q08378 1498 aa19.37■□□□□ 0.69
PEX1-201ENST00000248633 P3H3Q8IVL6 736 aa19.37■□□□□ 0.69
PEX1-201ENST00000248633 KIF27Q86VH2 1401 aa19.36■□□□□ 0.69
PEX1-201ENST00000248633 MIER1Q8N108 512 aa19.34■□□□□ 0.69
PEX1-201ENST00000248633 FBLN2P98095 1184 aa19.33■□□□□ 0.69
PEX1-201ENST00000248633 CC2D2AQ9P2K1 1620 aa19.33■□□□□ 0.68
PEX1-201ENST00000248633 CEP162Q5TB80 1403 aa19.32■□□□□ 0.68
PEX1-201ENST00000248633 PEG3Q9GZU2 1588 aa19.32■□□□□ 0.68
PEX1-201ENST00000248633 HMGXB3Q12766 1538 aa19.31■□□□□ 0.68
PEX1-201ENST00000248633 CEP164Q9UPV0 1460 aa19.3■□□□□ 0.68
PEX1-201ENST00000248633 TNIKQ9UKE5 1360 aa19.3■□□□□ 0.68
PEX1-201ENST00000248633 RUSC2Q8N2Y8 1516 aa19.28■□□□□ 0.68
PEX1-201ENST00000248633 CLIP1P30622 1438 aa19.27■□□□□ 0.68
PEX1-201ENST00000248633 CUX2O14529 1486 aa19.25■□□□□ 0.67
PEX1-201ENST00000248633 PDS5BQ9NTI5 1447 aa19.23■□□□□ 0.67
PEX1-201ENST00000248633 FANCD2Q9BXW9 1451 aa19.2■□□□□ 0.66
PEX1-201ENST00000248633 CFTRP13569 1480 aa19.19■□□□□ 0.66
PEX1-201ENST00000248633 ERCC6Q03468 1493 aa19.16■□□□□ 0.66
PEX1-201ENST00000248633 SYNJ1O43426 1573 aa19.13■□□□□ 0.65
PEX1-201ENST00000248633 CARMIL1Q5VZK9 1371 aa19.12■□□□□ 0.65
PEX1-201ENST00000248633 DNAJC5BQ9UF47 199 aa19.11■□□□□ 0.65
PEX1-201ENST00000248633 NESP48681 1621 aa19.09■□□□□ 0.65
PEX1-201ENST00000248633 CNGB1Q14028 1251 aaPredicted RBP19.08■□□□□ 0.65
PEX1-201ENST00000248633 FAM50AQ14320 339 aaKnown RBP19.08■□□□□ 0.65
PEX1-201ENST00000248633 ARID3CA6NKF2 412 aa19.07■□□□□ 0.64
PEX1-201ENST00000248633 TDRD9Q8NDG6 1382 aaKnown RBP19.07■□□□□ 0.64
PEX1-201ENST00000248633 RAPGEF2Q9Y4G8 1499 aa19.05■□□□□ 0.64
PEX1-201ENST00000248633 CHMP7Q8WUX9 453 aaPredicted RBP19.02■□□□□ 0.63
PEX1-201ENST00000248633 FGD5Q6ZNL6 1462 aa19.01■□□□□ 0.63
PEX1-201ENST00000248633 CUX1P39880 1505 aa18.97■□□□□ 0.63
PEX1-201ENST00000248633 FKBP8Q14318 412 aa18.97■□□□□ 0.63
PEX1-201ENST00000248633 TOP2BQ02880 1626 aa18.96■□□□□ 0.63
PEX1-201ENST00000248633 RAD54L2Q9Y4B4 1467 aa18.95■□□□□ 0.62
PEX1-201ENST00000248633 IGF1RP08069 1367 aa18.9■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 137.3 ms