RNA–Protein interactions for RNA: ENST00000553020.5

CNOT2-242, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 5

Gene CNOT2, Length 576 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-242ENST00000553020 NISCHQ9Y2I1 1504 aa22.09■■□□□ 1.13
CNOT2-242ENST00000553020 DNAJC5BQ9UF47 199 aa20.63■□□□□ 0.89
CNOT2-242ENST00000553020 ABCC9O60706 1549 aa20.42■□□□□ 0.86
CNOT2-242ENST00000553020 DNAJC5Q9H3Z4 198 aa20.13■□□□□ 0.81
CNOT2-242ENST00000553020 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
CNOT2-242ENST00000553020 PABPN1Q86U42 306 aaKnown RBP eCLIP18.78■□□□□ 0.6
CNOT2-242ENST00000553020 RB1CC1Q8TDY2 1594 aa18.66■□□□□ 0.58
CNOT2-242ENST00000553020 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
CNOT2-242ENST00000553020 TRIM41Q8WV44 630 aa18.63■□□□□ 0.57
CNOT2-242ENST00000553020 CECR2Q9BXF3 1484 aa18.55■□□□□ 0.56
CNOT2-242ENST00000553020 CC2D2AQ9P2K1 1620 aa18.33■□□□□ 0.52
CNOT2-242ENST00000553020 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
CNOT2-242ENST00000553020 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
CNOT2-242ENST00000553020 CUX2O14529 1486 aa18.24■□□□□ 0.51
CNOT2-242ENST00000553020 UNC13AQ9UPW8 1703 aa18.21■□□□□ 0.51
CNOT2-242ENST00000553020 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
CNOT2-242ENST00000553020 BICRAQ9NZM4 1560 aa18.18■□□□□ 0.5
CNOT2-242ENST00000553020 NACADO15069 1562 aa18.12■□□□□ 0.49
CNOT2-242ENST00000553020 AEBP2Q6ZN18 517 aaPredicted RBP17.99■□□□□ 0.47
CNOT2-242ENST00000553020 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
CNOT2-242ENST00000553020 EIF4G1Q04637 1599 aaKnown RBP17.87■□□□□ 0.45
CNOT2-242ENST00000553020 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
CNOT2-242ENST00000553020 ERCC6Q03468 1493 aa17.75■□□□□ 0.43
CNOT2-242ENST00000553020 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
CNOT2-242ENST00000553020 ILDR1Q86SU0 546 aaPredicted RBP17.57■□□□□ 0.4
CNOT2-242ENST00000553020 TRHP20396 242 aaPredicted RBP17.27■□□□□ 0.36
CNOT2-242ENST00000553020 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
CNOT2-242ENST00000553020 THOC2Q8NI27 1593 aaKnown RBP17.19■□□□□ 0.34
CNOT2-242ENST00000553020 OSCARQ8IYS5 282 aa17.16■□□□□ 0.34
CNOT2-242ENST00000553020 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-242ENST00000553020 RIMBP3CA6NJZ7 1639 aa17.1■□□□□ 0.33
CNOT2-242ENST00000553020 RIMBP3BA6NNM3 1639 aa17.1■□□□□ 0.33
CNOT2-242ENST00000553020 RIMBP3Q9UFD9 1639 aa17.1■□□□□ 0.33
CNOT2-242ENST00000553020 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
CNOT2-242ENST00000553020 NESP48681 1621 aa17.07■□□□□ 0.32
CNOT2-242ENST00000553020 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
CNOT2-242ENST00000553020 SMARCA2P51531 1590 aa16.95■□□□□ 0.3
CNOT2-242ENST00000553020 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
CNOT2-242ENST00000553020 WIZO95785 1651 aa16.92■□□□□ 0.3
CNOT2-242ENST00000553020 CYB5RLQ6IPT4 315 aa16.9■□□□□ 0.3
CNOT2-242ENST00000553020 ARHGEF11O15085 1522 aa16.88■□□□□ 0.29
CNOT2-242ENST00000553020 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
CNOT2-242ENST00000553020 NCAPD3P42695 1498 aa16.76■□□□□ 0.27
CNOT2-242ENST00000553020 KIF21AQ7Z4S6 1674 aa16.75■□□□□ 0.27
CNOT2-242ENST00000553020 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
CNOT2-242ENST00000553020 LAMC3Q9Y6N6 1575 aa16.64■□□□□ 0.25
CNOT2-242ENST00000553020 PDS5BQ9NTI5 1447 aa16.62■□□□□ 0.25
CNOT2-242ENST00000553020 ARAP1Q96P48 1450 aa16.61■□□□□ 0.25
CNOT2-242ENST00000553020 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
CNOT2-242ENST00000553020 MRC2Q9UBG0 1479 aa16.58■□□□□ 0.24
CNOT2-242ENST00000553020 WDR62O43379 1518 aa16.57■□□□□ 0.24
CNOT2-242ENST00000553020 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
CNOT2-242ENST00000553020 LMTK3Q96Q04 1460 aa16.55■□□□□ 0.24
CNOT2-242ENST00000553020 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CNOT2-242ENST00000553020 SOCS7O14512 581 aa16.5■□□□□ 0.23
CNOT2-242ENST00000553020 HMGXB3Q12766 1538 aa16.46■□□□□ 0.23
CNOT2-242ENST00000553020 FBXO41Q8TF61 875 aa16.45■□□□□ 0.22
CNOT2-242ENST00000553020 KDM4FA0A1W2PPD8 638 aa16.38■□□□□ 0.21
CNOT2-242ENST00000553020 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
CNOT2-242ENST00000553020 EEA1Q15075 1411 aa16.36■□□□□ 0.21
CNOT2-242ENST00000553020 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
CNOT2-242ENST00000553020 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
CNOT2-242ENST00000553020 ILDR2Q71H61 639 aa16.33■□□□□ 0.2
CNOT2-242ENST00000553020 ERCC6L2Q5T890 1561 aa16.31■□□□□ 0.2
CNOT2-242ENST00000553020 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
CNOT2-242ENST00000553020 CADPSQ9ULU8 1353 aa16.19■□□□□ 0.18
CNOT2-242ENST00000553020 CEP164Q9UPV0 1460 aa16.18■□□□□ 0.18
CNOT2-242ENST00000553020 HECW2Q9P2P5 1572 aa16.16■□□□□ 0.18
CNOT2-242ENST00000553020 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
CNOT2-242ENST00000553020 DISP3Q9P2K9 1392 aa16.12■□□□□ 0.17
CNOT2-242ENST00000553020 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
CNOT2-242ENST00000553020 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
CNOT2-242ENST00000553020 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
CNOT2-242ENST00000553020 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
CNOT2-242ENST00000553020 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
CNOT2-242ENST00000553020 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
CNOT2-242ENST00000553020 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
CNOT2-242ENST00000553020 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CNOT2-242ENST00000553020 SOGA1O94964 1423 aa16.09■□□□□ 0.17
CNOT2-242ENST00000553020 CFTRP13569 1480 aa16.09■□□□□ 0.17
CNOT2-242ENST00000553020 ZNF608Q9ULD9 1512 aaPredicted RBP16.07■□□□□ 0.16
CNOT2-242ENST00000553020 CHD1O14646 1710 aa16.07■□□□□ 0.16
CNOT2-242ENST00000553020 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
CNOT2-242ENST00000553020 KIF21BO75037 1637 aa16.04■□□□□ 0.16
CNOT2-242ENST00000553020 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
CNOT2-242ENST00000553020 FBLN2P98095 1184 aa16■□□□□ 0.15
CNOT2-242ENST00000553020 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
CNOT2-242ENST00000553020 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
CNOT2-242ENST00000553020 URB2Q14146 1524 aaKnown RBP15.99■□□□□ 0.15
CNOT2-242ENST00000553020 SYNJ2O15056 1496 aa15.97■□□□□ 0.15
CNOT2-242ENST00000553020 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
CNOT2-242ENST00000553020 HRCP23327 699 aa15.94■□□□□ 0.14
CNOT2-242ENST00000553020 CUX1P39880 1505 aa15.93■□□□□ 0.14
CNOT2-242ENST00000553020 IFT140Q96RY7 1462 aa15.91■□□□□ 0.14
CNOT2-242ENST00000553020 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
CNOT2-242ENST00000553020 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
CNOT2-242ENST00000553020 EIF4G3O43432 1585 aaKnown RBP15.87■□□□□ 0.13
CNOT2-242ENST00000553020 KIF13AQ9H1H9 1805 aa15.87■□□□□ 0.13
CNOT2-242ENST00000553020 ADGRL1O94910 1474 aa15.84■□□□□ 0.13
CNOT2-242ENST00000553020 GAPVD1Q14C86 1478 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 1051.5 ms