RNA–Protein interactions for RNA: ENST00000518382.1

MCM4-204, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 3

Gene MCM4, Length 366 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-204ENST00000518382 AEBP2Q6ZN18 517 aaPredicted RBP20.74■□□□□ 0.91
MCM4-204ENST00000518382 CHIC1Q5VXU3 224 aa20.36■□□□□ 0.85
MCM4-204ENST00000518382 PHF23Q9BUL5 403 aaPredicted RBP17.9■□□□□ 0.46
MCM4-204ENST00000518382 SENP3Q9H4L4 574 aaPredicted RBP17.61■□□□□ 0.41
MCM4-204ENST00000518382 PLPPR3Q6T4P5 718 aa16.56■□□□□ 0.24
MCM4-204ENST00000518382 FOXD1Q16676 465 aa16.31■□□□□ 0.2
MCM4-204ENST00000518382 PPP6R1Q9UPN7 881 aa15.75■□□□□ 0.11
MCM4-204ENST00000518382 ADRA2BP18089 450 aa15.7■□□□□ 0.1
MCM4-204ENST00000518382 PIAS4Q8N2W9 510 aaPredicted RBP15.37■□□□□ 0.05
MCM4-204ENST00000518382 MSH5O43196 834 aa15.04■□□□□ -0
MCM4-204ENST00000518382 PPP4R3CPQ6ZMV5 832 aa14.58□□□□□ -0.08
MCM4-204ENST00000518382 SCAF1Q9H7N4 1312 aaKnown RBP14.42□□□□□ -0.1
MCM4-204ENST00000518382 KCNA4P22459 653 aa14.31□□□□□ -0.12
MCM4-204ENST00000518382 NCBP3Q53F19 620 aaKnown RBP14.23□□□□□ -0.13
MCM4-204ENST00000518382 MAPK8IP2Q13387 824 aaPredicted RBP14.22□□□□□ -0.13
MCM4-204ENST00000518382 CNKSR2Q8WXI2 1034 aa14.18□□□□□ -0.14
MCM4-204ENST00000518382 DMRT2Q9Y5R5 561 aa14.08□□□□□ -0.16
MCM4-204ENST00000518382 NPM3O75607 178 aaKnown RBP14.01□□□□□ -0.17
MCM4-204ENST00000518382 RNF216Q9NWF9 866 aaPredicted RBP13.9□□□□□ -0.18
MCM4-204ENST00000518382 HOXD11P31277 338 aaPredicted RBP13.84□□□□□ -0.19
MCM4-204ENST00000518382 DNAJC5BQ9UF47 199 aa13.75□□□□□ -0.21
MCM4-204ENST00000518382 SLC4A1APQ9BWU0 796 aaKnown RBP13.64□□□□□ -0.23
MCM4-204ENST00000518382 POTEDQ86YR6 584 aa13.53□□□□□ -0.24
MCM4-204ENST00000518382 DCAF8L1A6NGE4 600 aa13.33□□□□□ -0.28
MCM4-204ENST00000518382 EHMT2Q96KQ7 1210 aa13.27□□□□□ -0.29
MCM4-204ENST00000518382 SLC4A2P04920 1241 aa13.23□□□□□ -0.29
MCM4-204ENST00000518382 ZBTB22O15209 634 aa13.18□□□□□ -0.3
MCM4-204ENST00000518382 FOXD4L1Q9NU39 408 aa13.18□□□□□ -0.3
MCM4-204ENST00000518382 CSRNP3Q8WYN3 585 aa13.17□□□□□ -0.3
MCM4-204ENST00000518382 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.09□□□□□ -0.311e-7■■□□□ 12.9
MCM4-204ENST00000518382 MYCNP04198 464 aaPredicted RBP12.97□□□□□ -0.33
MCM4-204ENST00000518382 U3KPZ7 1027 aaPredicted RBP12.94□□□□□ -0.34
MCM4-204ENST00000518382 RNF39Q9H2S5 420 aa12.9□□□□□ -0.34
MCM4-204ENST00000518382 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.83□□□□□ -0.36
MCM4-204ENST00000518382 HNRNPUL2Q1KMD3 747 aaKnown RBP12.83□□□□□ -0.36
MCM4-204ENST00000518382 SAMD1Q6SPF0 538 aaPredicted RBP12.78□□□□□ -0.36
MCM4-204ENST00000518382 ATXN8OSP0DMR3 200 aa12.77□□□□□ -0.37
MCM4-204ENST00000518382 C1QBPQ07021 282 aaKnown RBP12.76□□□□□ -0.37
MCM4-204ENST00000518382 APLP2Q06481 763 aa12.67□□□□□ -0.38
MCM4-204ENST00000518382 ATF5Q9Y2D1 282 aaPredicted RBP12.57□□□□□ -0.4
MCM4-204ENST00000518382 SPINK5Q9NQ38 1064 aaPredicted RBP12.52□□□□□ -0.41
MCM4-204ENST00000518382 ZNF219Q9P2Y4 722 aaPredicted RBP12.48□□□□□ -0.41
MCM4-204ENST00000518382 CAPN15O75808 1086 aa12.44□□□□□ -0.42
MCM4-204ENST00000518382 CACNB1Q02641 598 aaPredicted RBP12.44□□□□□ -0.42
MCM4-204ENST00000518382 TRHP20396 242 aaPredicted RBP12.39□□□□□ -0.43
MCM4-204ENST00000518382 DSG3P32926 999 aa12.28□□□□□ -0.44
MCM4-204ENST00000518382 POLA2Q14181 598 aa12.24□□□□□ -0.45
MCM4-204ENST00000518382 ABCB7O75027 752 aa12.19□□□□□ -0.46
MCM4-204ENST00000518382 ZBTB12Q9Y330 459 aaPredicted RBP12.11□□□□□ -0.47
MCM4-204ENST00000518382 MKRN4PQ13434 485 aaPredicted RBP12.06□□□□□ -0.48
MCM4-204ENST00000518382 FBLN2P98095 1184 aa12.05□□□□□ -0.48
MCM4-204ENST00000518382 FKBP8Q14318 412 aa11.86□□□□□ -0.51
MCM4-204ENST00000518382 OSCARQ8IYS5 282 aa11.82□□□□□ -0.52
MCM4-204ENST00000518382 SPDYE4A6NLX3 237 aa11.8□□□□□ -0.52
MCM4-204ENST00000518382 SPDYE2BA6NHP3 402 aa11.79□□□□□ -0.52
MCM4-204ENST00000518382 SPDYE6P0CI01 402 aa11.79□□□□□ -0.52
MCM4-204ENST00000518382 SPDYE2Q495Y8 402 aa11.79□□□□□ -0.52
MCM4-204ENST00000518382 PROM2Q8N271 834 aa11.72□□□□□ -0.53
MCM4-204ENST00000518382 RBM42Q9BTD8 480 aaKnown RBP11.72□□□□□ -0.53
MCM4-204ENST00000518382 SSUH2Q9Y2M2 353 aa11.72□□□□□ -0.53
MCM4-204ENST00000518382 ZNF692Q9BU19 519 aaPredicted RBP11.7□□□□□ -0.54
MCM4-204ENST00000518382 AKT1S1Q96B36 256 aa11.59□□□□□ -0.55
MCM4-204ENST00000518382 PABPN1Q86U42 306 aaKnown RBP eCLIP11.55□□□□□ -0.56
MCM4-204ENST00000518382 FBXO3Q9UK99 471 aa11.47□□□□□ -0.57
MCM4-204ENST00000518382 REM2Q8IYK8 340 aaPredicted RBP11.45□□□□□ -0.58
MCM4-204ENST00000518382 STAG3Q9UJ98 1225 aa11.42□□□□□ -0.58
MCM4-204ENST00000518382 SPDYE1Q8NFV5 336 aaPredicted RBP11.4□□□□□ -0.58
MCM4-204ENST00000518382 PITPNM1O00562 1244 aa11.31□□□□□ -0.6
MCM4-204ENST00000518382 VASPP50552 380 aaPredicted RBP11.29□□□□□ -0.6
MCM4-204ENST00000518382 CLEC11AQ9Y240 323 aa11.26□□□□□ -0.61
MCM4-204ENST00000518382 PRR29P0C7W0 189 aa11.22□□□□□ -0.61
MCM4-204ENST00000518382 CHRDL2Q6WN34 429 aa11.17□□□□□ -0.62
MCM4-204ENST00000518382 IFNLR1Q8IU57 520 aaPredicted RBP11.15□□□□□ -0.62
MCM4-204ENST00000518382 MIER1Q8N108 512 aa11.15□□□□□ -0.62
MCM4-204ENST00000518382 PLCD3Q8N3E9 789 aa11.14□□□□□ -0.63
MCM4-204ENST00000518382 FXR2P51116 673 aaKnown RBP eCLIP11.12□□□□□ -0.636e-8■■■□□ 15
MCM4-204ENST00000518382 CREBZFQ9NS37 354 aa11.12□□□□□ -0.63
MCM4-204ENST00000518382 PLEKHG5O94827 1062 aa11.11□□□□□ -0.63
MCM4-204ENST00000518382 ZBTB47Q9UFB7 747 aaPredicted RBP11.08□□□□□ -0.64
MCM4-204ENST00000518382 MNX1P50219 401 aaPredicted RBP11.05□□□□□ -0.64
MCM4-204ENST00000518382 PIP4P2Q8N4L2 257 aa11.04□□□□□ -0.64
MCM4-204ENST00000518382 KLHL34Q8N239 644 aa11.01□□□□□ -0.65
MCM4-204ENST00000518382 PRKAR2AP13861 404 aaKnown RBP11□□□□□ -0.65
MCM4-204ENST00000518382 AMER1Q5JTC6 1135 aaPredicted RBP10.99□□□□□ -0.65
MCM4-204ENST00000518382 CHADLQ6NUI6 762 aa10.99□□□□□ -0.65
MCM4-204ENST00000518382 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
MCM4-204ENST00000518382 FARP1Q9Y4F1 1045 aaPredicted RBP10.95□□□□□ -0.66
MCM4-204ENST00000518382 NPM1P06748 294 aaKnown RBP eCLIP10.93□□□□□ -0.66
MCM4-204ENST00000518382 NUBP1P53384 320 aa10.92□□□□□ -0.66
MCM4-204ENST00000518382 RTN4Q9NQC3 1192 aaKnown RBP10.91□□□□□ -0.66
MCM4-204ENST00000518382 RASEFQ8IZ41 740 aa10.83□□□□□ -0.68
MCM4-204ENST00000518382 PKD2Q13563 968 aa10.81□□□□□ -0.68
MCM4-204ENST00000518382 GSE1Q14687 1217 aa10.81□□□□□ -0.68
MCM4-204ENST00000518382 FAM212AQ96EL1 285 aa10.81□□□□□ -0.68
MCM4-204ENST00000518382 TRIM41Q8WV44 630 aa10.77□□□□□ -0.69
MCM4-204ENST00000518382 DCAF8Q5TAQ9 597 aa10.75□□□□□ -0.69
MCM4-204ENST00000518382 CIZ1Q9ULV3 898 aaPredicted RBP10.75□□□□□ -0.69
MCM4-204ENST00000518382 C19orf67A6NJJ6 358 aa10.74□□□□□ -0.69
MCM4-204ENST00000518382 POTEHQ6S545 545 aa10.73□□□□□ -0.69
MCM4-204ENST00000518382 PAK3O75914 559 aaPredicted RBP10.71□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 951.7 ms