RNA–Protein interactions for RNA: ENST00000417344.2

CCNT1-202, Transcript of cyclin T1, humanhuman

TSL 2

Gene CCNT1, Length 2,017 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-202ENST00000417344 AEBP2Q6ZN18 517 aaPredicted RBP17.11■□□□□ 0.33
CCNT1-202ENST00000417344 CHIC1Q5VXU3 224 aa16.95■□□□□ 0.3
CCNT1-202ENST00000417344 PHF23Q9BUL5 403 aaPredicted RBP14.85□□□□□ -0.03
CCNT1-202ENST00000417344 SENP3Q9H4L4 574 aaPredicted RBP14.61□□□□□ -0.07
CCNT1-202ENST00000417344 PLPPR3Q6T4P5 718 aa13.87□□□□□ -0.19
CCNT1-202ENST00000417344 FOXD1Q16676 465 aa13.45□□□□□ -0.26
CCNT1-202ENST00000417344 ADRA2BP18089 450 aa13.02□□□□□ -0.33
CCNT1-202ENST00000417344 PPP6R1Q9UPN7 881 aa13.02□□□□□ -0.33
CCNT1-202ENST00000417344 PIAS4Q8N2W9 510 aaPredicted RBP12.75□□□□□ -0.37
CCNT1-202ENST00000417344 MSH5O43196 834 aa12.44□□□□□ -0.42
CCNT1-202ENST00000417344 PPP4R3CPQ6ZMV5 832 aa12.19□□□□□ -0.46
CCNT1-202ENST00000417344 SCAF1Q9H7N4 1312 aaKnown RBP12.07□□□□□ -0.48
CCNT1-202ENST00000417344 KCNA4P22459 653 aa12.05□□□□□ -0.48
CCNT1-202ENST00000417344 NCBP3Q53F19 620 aaKnown RBP12□□□□□ -0.49
CCNT1-202ENST00000417344 CNKSR2Q8WXI2 1034 aa11.87□□□□□ -0.51
CCNT1-202ENST00000417344 NPM3O75607 178 aaKnown RBP11.74□□□□□ -0.53
CCNT1-202ENST00000417344 MAPK8IP2Q13387 824 aaPredicted RBP11.74□□□□□ -0.53
CCNT1-202ENST00000417344 DMRT2Q9Y5R5 561 aa11.67□□□□□ -0.54
CCNT1-202ENST00000417344 RNF216Q9NWF9 866 aaPredicted RBP11.6□□□□□ -0.55
CCNT1-202ENST00000417344 SLC4A1APQ9BWU0 796 aaKnown RBP11.55□□□□□ -0.56
CCNT1-202ENST00000417344 DNAJC5BQ9UF47 199 aa11.53□□□□□ -0.56
CCNT1-202ENST00000417344 HOXD11P31277 338 aaPredicted RBP11.5□□□□□ -0.57
CCNT1-202ENST00000417344 EHMT2Q96KQ7 1210 aa11.33□□□□□ -0.6
CCNT1-202ENST00000417344 CSRNP3Q8WYN3 585 aa11.17□□□□□ -0.62
CCNT1-202ENST00000417344 FOXD4L1Q9NU39 408 aa11.13□□□□□ -0.63
CCNT1-202ENST00000417344 DCAF8L1A6NGE4 600 aa11.07□□□□□ -0.64
CCNT1-202ENST00000417344 ZBTB22O15209 634 aa11.07□□□□□ -0.64
CCNT1-202ENST00000417344 NISCHQ9Y2I1 1504 aa11.04□□□□□ -0.64
CCNT1-202ENST00000417344 PELP1Q8IZL8 1130 aaKnown RBP11.04□□□□□ -0.64
CCNT1-202ENST00000417344 SLC4A2P04920 1241 aa11.02□□□□□ -0.64
CCNT1-202ENST00000417344 POTEDQ86YR6 584 aa10.95□□□□□ -0.66
CCNT1-202ENST00000417344 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.92□□□□□ -0.664e-8■■■■□ 25.6
CCNT1-202ENST00000417344 MYCNP04198 464 aaPredicted RBP10.91□□□□□ -0.66
CCNT1-202ENST00000417344 HRCP23327 699 aa10.88□□□□□ -0.67
CCNT1-202ENST00000417344 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP10.79□□□□□ -0.68
CCNT1-202ENST00000417344 HNRNPUL2Q1KMD3 747 aaKnown RBP10.79□□□□□ -0.68
CCNT1-202ENST00000417344 ATXN8OSP0DMR3 200 aa10.79□□□□□ -0.68
CCNT1-202ENST00000417344 U3KPZ7 1027 aaPredicted RBP10.75□□□□□ -0.69
CCNT1-202ENST00000417344 MYT1Q01538 1121 aa10.74□□□□□ -0.69
CCNT1-202ENST00000417344 SAMD1Q6SPF0 538 aaPredicted RBP10.73□□□□□ -0.69
CCNT1-202ENST00000417344 APLP2Q06481 763 aa10.67□□□□□ -0.7
CCNT1-202ENST00000417344 RNF39Q9H2S5 420 aa10.63□□□□□ -0.71
CCNT1-202ENST00000417344 PPARGC1BQ86YN6 1023 aaKnown RBP10.58□□□□□ -0.72
CCNT1-202ENST00000417344 C1QBPQ07021 282 aaKnown RBP10.57□□□□□ -0.72
CCNT1-202ENST00000417344 ATF5Q9Y2D1 282 aaPredicted RBP10.47□□□□□ -0.73
CCNT1-202ENST00000417344 PCGF6Q9BYE7 350 aa10.46□□□□□ -0.74
CCNT1-202ENST00000417344 ZNF219Q9P2Y4 722 aaPredicted RBP10.43□□□□□ -0.74
CCNT1-202ENST00000417344 SPINK5Q9NQ38 1064 aaPredicted RBP10.36□□□□□ -0.75
CCNT1-202ENST00000417344 CAPN15O75808 1086 aa10.34□□□□□ -0.75
CCNT1-202ENST00000417344 TRHP20396 242 aaPredicted RBP10.31□□□□□ -0.76
CCNT1-202ENST00000417344 MYO15BQ96JP2 1530 aa10.25□□□□□ -0.77
CCNT1-202ENST00000417344 CACNB1Q02641 598 aaPredicted RBP10.21□□□□□ -0.78
CCNT1-202ENST00000417344 POLA2Q14181 598 aa10.2□□□□□ -0.78
CCNT1-202ENST00000417344 ZBTB12Q9Y330 459 aaPredicted RBP10.18□□□□□ -0.78
CCNT1-202ENST00000417344 TTBK1Q5TCY1 1321 aaPredicted RBP10.18□□□□□ -0.78
CCNT1-202ENST00000417344 FBLN2P98095 1184 aa10.16□□□□□ -0.78
CCNT1-202ENST00000417344 DSG3P32926 999 aa10.15□□□□□ -0.78
CCNT1-202ENST00000417344 DCAF1Q9Y4B6 1507 aa10.15□□□□□ -0.78
CCNT1-202ENST00000417344 ZEB1P37275 1124 aaPredicted RBP10.14□□□□□ -0.79
CCNT1-202ENST00000417344 ACIN1Q9UKV3 1341 aaKnown RBP10.12□□□□□ -0.79
CCNT1-202ENST00000417344 ABCB7O75027 752 aa10.12□□□□□ -0.79
CCNT1-202ENST00000417344 SUPT5HO00267 1087 aaKnown RBP10.09□□□□□ -0.79
CCNT1-202ENST00000417344 FKBP8Q14318 412 aa10.09□□□□□ -0.79
CCNT1-202ENST00000417344 TRIM26Q12899 539 aaPredicted RBP10.08□□□□□ -0.8
CCNT1-202ENST00000417344 CCDC180Q9P1Z9 1646 aa10.06□□□□□ -0.8
CCNT1-202ENST00000417344 MKRN4PQ13434 485 aaPredicted RBP10.06□□□□□ -0.8
CCNT1-202ENST00000417344 NEUROD1Q13562 356 aa10.05□□□□□ -0.8
CCNT1-202ENST00000417344 GTF3C3Q9Y5Q9 886 aa10.03□□□□□ -0.8
CCNT1-202ENST00000417344 SHROOM4Q9ULL8 1493 aa9.99□□□□□ -0.81
CCNT1-202ENST00000417344 SPDYE4A6NLX3 237 aa9.96□□□□□ -0.81
CCNT1-202ENST00000417344 CENPBP07199 599 aaPredicted RBP9.95□□□□□ -0.82
CCNT1-202ENST00000417344 BCL11AQ9H165 835 aa9.92□□□□□ -0.82
CCNT1-202ENST00000417344 SPDYE2BA6NHP3 402 aa9.87□□□□□ -0.83
CCNT1-202ENST00000417344 SPDYE6P0CI01 402 aa9.87□□□□□ -0.83
CCNT1-202ENST00000417344 SPDYE2Q495Y8 402 aa9.87□□□□□ -0.83
CCNT1-202ENST00000417344 PROM2Q8N271 834 aa9.87□□□□□ -0.83
CCNT1-202ENST00000417344 LOC105371045A0A1W2PR82 267 aa9.85□□□□□ -0.83
CCNT1-202ENST00000417344 OSCARQ8IYS5 282 aa9.85□□□□□ -0.83
CCNT1-202ENST00000417344 FAM9AQ8IZU1 332 aaPredicted RBP9.82□□□□□ -0.84
CCNT1-202ENST00000417344 ZNF692Q9BU19 519 aaPredicted RBP9.8□□□□□ -0.84
CCNT1-202ENST00000417344 FBXO3Q9UK99 471 aa9.8□□□□□ -0.84
CCNT1-202ENST00000417344 SSUH2Q9Y2M2 353 aa9.79□□□□□ -0.84
CCNT1-202ENST00000417344 PRKCSHP14314 528 aaPredicted RBP9.77□□□□□ -0.85
CCNT1-202ENST00000417344 RBM42Q9BTD8 480 aaKnown RBP9.77□□□□□ -0.85
CCNT1-202ENST00000417344 DIEXFQ68CQ4 756 aaKnown RBP9.76□□□□□ -0.85
CCNT1-202ENST00000417344 ANP32EQ9BTT0 268 aa9.73□□□□□ -0.85
CCNT1-202ENST00000417344 PABPN1Q86U42 306 aaKnown RBP eCLIP9.66□□□□□ -0.86
CCNT1-202ENST00000417344 AKT1S1Q96B36 256 aa9.65□□□□□ -0.87
CCNT1-202ENST00000417344 STAG3Q9UJ98 1225 aa9.63□□□□□ -0.87
CCNT1-202ENST00000417344 ERICH6Q7L0X2 663 aa9.6□□□□□ -0.87
CCNT1-202ENST00000417344 VASPP50552 380 aaPredicted RBP9.6□□□□□ -0.87
CCNT1-202ENST00000417344 YTHDC1Q96MU7 727 aaKnown RBP9.6□□□□□ -0.87
CCNT1-202ENST00000417344 CCER1Q8TC90 406 aaPredicted RBP9.59□□□□□ -0.87
CCNT1-202ENST00000417344 TRIM41Q8WV44 630 aa9.59□□□□□ -0.87
CCNT1-202ENST00000417344 AMER1Q5JTC6 1135 aaPredicted RBP9.57□□□□□ -0.88
CCNT1-202ENST00000417344 SPDYE1Q8NFV5 336 aaPredicted RBP9.53□□□□□ -0.88
CCNT1-202ENST00000417344 TSHZ2Q9NRE2 1034 aa9.53□□□□□ -0.88
CCNT1-202ENST00000417344 CLSPNQ9HAW4 1339 aa9.52□□□□□ -0.88
CCNT1-202ENST00000417344 ZNF316A6NFI3 1004 aaPredicted RBP9.5□□□□□ -0.89
CCNT1-202ENST00000417344 REM2Q8IYK8 340 aaPredicted RBP9.49□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms