RNA–Protein interactions for RNA: ENST00000502492.5

SNF8-202, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SNF8, Length 2,319 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-202ENST00000502492 NISCHQ9Y2I1 1504 aa48.36■■■■■ 5.33
SNF8-202ENST00000502492 CCDC180Q9P1Z9 1646 aa42.41■■■■■ 4.38
SNF8-202ENST00000502492 ABCC9O60706 1549 aa40.61■■■■■ 4.09
SNF8-202ENST00000502492 SHROOM4Q9ULL8 1493 aa40.52■■■■■ 4.08
SNF8-202ENST00000502492 ZCCHC6Q5VYS8 1495 aaKnown RBP40.51■■■■■ 4.08
SNF8-202ENST00000502492 DCAF8L2P0C7V8 631 aa40.08■■■■■ 4.01
SNF8-202ENST00000502492 DCAF1Q9Y4B6 1507 aa40.01■■■■■ 4
SNF8-202ENST00000502492 SUPT5HO00267 1087 aaKnown RBP39.78■■■■□ 3.96
SNF8-202ENST00000502492 MYO15BQ96JP2 1530 aa39.76■■■■□ 3.96
SNF8-202ENST00000502492 NACADO15069 1562 aa39.66■■■■□ 3.94
SNF8-202ENST00000502492 RB1CC1Q8TDY2 1594 aa39.44■■■■□ 3.9
SNF8-202ENST00000502492 SCRIBQ14160 1630 aa38.9■■■■□ 3.82
SNF8-202ENST00000502492 CHIC1Q5VXU3 224 aa38.87■■■■□ 3.81
SNF8-202ENST00000502492 UNC13AQ9UPW8 1703 aa38.56■■■■□ 3.76
SNF8-202ENST00000502492 BICRAQ9NZM4 1560 aa38.26■■■■□ 3.72
SNF8-202ENST00000502492 PABPN1Q86U42 306 aaKnown RBP eCLIP38.19■■■■□ 3.75e-8■■■□□ 16.1
SNF8-202ENST00000502492 RSF1Q96T23 1441 aaPredicted RBP37.84■■■■□ 3.65
SNF8-202ENST00000502492 HRCP23327 699 aa37.77■■■■□ 3.64
SNF8-202ENST00000502492 CECR2Q9BXF3 1484 aa37.61■■■■□ 3.61
SNF8-202ENST00000502492 LOC105371045A0A1W2PR82 267 aa37.59■■■■□ 3.61
SNF8-202ENST00000502492 PCGF6Q9BYE7 350 aa37.59■■■■□ 3.61
SNF8-202ENST00000502492 BAZ1AQ9NRL2 1556 aaPredicted RBP37.38■■■■□ 3.57
SNF8-202ENST00000502492 MROH2BQ7Z745 1585 aa37.32■■■■□ 3.57
SNF8-202ENST00000502492 SMARCA4P51532 1647 aa37.27■■■■□ 3.56
SNF8-202ENST00000502492 EIF4G1Q04637 1599 aaKnown RBP37.16■■■■□ 3.54
SNF8-202ENST00000502492 TRIM41Q8WV44 630 aa37.15■■■■□ 3.54
SNF8-202ENST00000502492 TRIM26Q12899 539 aaPredicted RBP37.01■■■■□ 3.52
SNF8-202ENST00000502492 WIZO95785 1651 aa36.95■■■■□ 3.51
SNF8-202ENST00000502492 PEG3Q9GZU2 1588 aa36.87■■■■□ 3.49
SNF8-202ENST00000502492 ATAD2BQ9ULI0 1458 aa36.83■■■■□ 3.49
SNF8-202ENST00000502492 PPARGC1BQ86YN6 1023 aaKnown RBP36.8■■■■□ 3.48
SNF8-202ENST00000502492 SMARCA2P51531 1590 aa36.79■■■■□ 3.48
SNF8-202ENST00000502492 CC2D2AQ9P2K1 1620 aa36.74■■■■□ 3.47
SNF8-202ENST00000502492 FAM9AQ8IZU1 332 aaPredicted RBP36.7■■■■□ 3.47
SNF8-202ENST00000502492 NCAPD3P42695 1498 aa36.63■■■■□ 3.45
SNF8-202ENST00000502492 TOP2AP11388 1531 aaKnown RBP36.6■■■■□ 3.45
SNF8-202ENST00000502492 BAZ1BQ9UIG0 1483 aaKnown RBP36.58■■■■□ 3.45
SNF8-202ENST00000502492 HMGXB3Q12766 1538 aa36.51■■■■□ 3.44
SNF8-202ENST00000502492 DNAJC5BQ9UF47 199 aa36.36■■■■□ 3.41
SNF8-202ENST00000502492 ZEB1P37275 1124 aaPredicted RBP36.29■■■■□ 3.4
SNF8-202ENST00000502492 EHMT2Q96KQ7 1210 aa36.25■■■■□ 3.39
SNF8-202ENST00000502492 CCDC88BA6NC98 1476 aa36.22■■■■□ 3.39
SNF8-202ENST00000502492 ABCC8Q09428 1581 aa36.06■■■■□ 3.36
SNF8-202ENST00000502492 WRNQ14191 1432 aaPredicted RBP eCLIP35.75■■■■□ 3.31
SNF8-202ENST00000502492 SOGA1O94964 1423 aa35.75■■■■□ 3.31
SNF8-202ENST00000502492 EEA1Q15075 1411 aa35.75■■■■□ 3.31
SNF8-202ENST00000502492 TNIKQ9UKE5 1360 aa35.67■■■■□ 3.3
SNF8-202ENST00000502492 CEP162Q5TB80 1403 aa35.65■■■■□ 3.3
SNF8-202ENST00000502492 CFTRP13569 1480 aa35.65■■■■□ 3.3
SNF8-202ENST00000502492 CADPSQ9ULU8 1353 aa35.64■■■■□ 3.3
SNF8-202ENST00000502492 CSRNP3Q8WYN3 585 aa35.59■■■■□ 3.29
SNF8-202ENST00000502492 RUSC2Q8N2Y8 1516 aa35.56■■■■□ 3.28
SNF8-202ENST00000502492 NESP48681 1621 aa35.48■■■■□ 3.27
SNF8-202ENST00000502492 LAMC3Q9Y6N6 1575 aa35.45■■■■□ 3.27
SNF8-202ENST00000502492 GOLGA3Q08378 1498 aa35.42■■■■□ 3.26
SNF8-202ENST00000502492 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.39■■■■□ 3.26
SNF8-202ENST00000502492 SYNJ1O43426 1573 aa35.35■■■■□ 3.25
SNF8-202ENST00000502492 PRDM2Q13029 1718 aa35.34■■■■□ 3.25
SNF8-202ENST00000502492 UBTFP17480 764 aaKnown RBP35.34■■■■□ 3.25
SNF8-202ENST00000502492 CCER1Q8TC90 406 aaPredicted RBP35.33■■■■□ 3.25
SNF8-202ENST00000502492 KIF21BO75037 1637 aa35.24■■■■□ 3.23
SNF8-202ENST00000502492 CEP164Q9UPV0 1460 aa35.23■■■■□ 3.23
SNF8-202ENST00000502492 FANCD2Q9BXW9 1451 aa35.23■■■■□ 3.23
SNF8-202ENST00000502492 PDS5BQ9NTI5 1447 aa35.21■■■■□ 3.23
SNF8-202ENST00000502492 TTBK1Q5TCY1 1321 aaPredicted RBP35.12■■■■□ 3.21
SNF8-202ENST00000502492 KIF21AQ7Z4S6 1674 aa35.01■■■■□ 3.2
SNF8-202ENST00000502492 CLIP1P30622 1438 aa34.98■■■■□ 3.19
SNF8-202ENST00000502492 TOP2BQ02880 1626 aa34.98■■■■□ 3.19
SNF8-202ENST00000502492 CUX1P39880 1505 aa34.94■■■■□ 3.18
SNF8-202ENST00000502492 RAPGEF2Q9Y4G8 1499 aa34.9■■■■□ 3.18
SNF8-202ENST00000502492 ERCC6Q03468 1493 aa34.89■■■■□ 3.18
SNF8-202ENST00000502492 VPS8Q8N3P4 1428 aa34.88■■■■□ 3.17
SNF8-202ENST00000502492 BIVM-ERCC5R4GMW8 1640 aa34.87■■■■□ 3.17
SNF8-202ENST00000502492 URB2Q14146 1524 aaKnown RBP34.82■■■■□ 3.16
SNF8-202ENST00000502492 DNMBPQ6XZF7 1577 aa34.8■■■■□ 3.16
SNF8-202ENST00000502492 TOPBP1Q92547 1522 aa34.79■■■■□ 3.16
SNF8-202ENST00000502492 MRC2Q9UBG0 1479 aa34.78■■■■□ 3.16
SNF8-202ENST00000502492 SCAF1Q9H7N4 1312 aaKnown RBP34.75■■■■□ 3.15
SNF8-202ENST00000502492 DIEXFQ68CQ4 756 aaKnown RBP34.7■■■■□ 3.15
SNF8-202ENST00000502492 ERICH3Q5RHP9 1530 aa34.68■■■■□ 3.14
SNF8-202ENST00000502492 PRXQ9BXM0 1461 aa34.66■■■■□ 3.14
SNF8-202ENST00000502492 FGD5Q6ZNL6 1462 aa34.65■■■■□ 3.14
SNF8-202ENST00000502492 THOC2Q8NI27 1593 aaKnown RBP34.63■■■■□ 3.13
SNF8-202ENST00000502492 WDR62O43379 1518 aa34.62■■■■□ 3.13
SNF8-202ENST00000502492 APLP2Q06481 763 aa34.6■■■■□ 3.13
SNF8-202ENST00000502492 POLA1P09884 1462 aaPredicted RBP34.58■■■■□ 3.13
SNF8-202ENST00000502492 HNRNPUL2Q1KMD3 747 aaKnown RBP34.54■■■■□ 3.12
SNF8-202ENST00000502492 ZNF316A6NFI3 1004 aaPredicted RBP34.48■■■■□ 3.11
SNF8-202ENST00000502492 ACIN1Q9UKV3 1341 aaKnown RBP34.47■■■■□ 3.11
SNF8-202ENST00000502492 RANGAP1P46060 587 aaPredicted RBP34.44■■■■□ 3.1
SNF8-202ENST00000502492 ARAP1Q96P48 1450 aa34.44■■■■□ 3.1
SNF8-202ENST00000502492 RAD54L2Q9Y4B4 1467 aa34.44■■■■□ 3.1
SNF8-202ENST00000502492 KIF27Q86VH2 1401 aa34.44■■■■□ 3.1
SNF8-202ENST00000502492 CUX2O14529 1486 aa34.38■■■■□ 3.09
SNF8-202ENST00000502492 NEUROD1Q13562 356 aa34.37■■■■□ 3.09
SNF8-202ENST00000502492 ABCA10Q8WWZ4 1543 aa34.35■■■■□ 3.09
SNF8-202ENST00000502492 TARBP1Q13395 1621 aaKnown RBP34.3■■■■□ 3.08
SNF8-202ENST00000502492 CENPBP07199 599 aaPredicted RBP34.28■■■■□ 3.08
SNF8-202ENST00000502492 IFT140Q96RY7 1462 aa34.28■■■■□ 3.08
SNF8-202ENST00000502492 WDR97A6NE52 1622 aa34.24■■■■□ 3.07
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms