RNA–Protein interactions for RNA: ENST00000553078.5

CNOT2-243, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

TSL 3

Gene CNOT2, Length 440 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-243ENST00000553078 NISCHQ9Y2I1 1504 aa22.09■■□□□ 1.13
CNOT2-243ENST00000553078 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
CNOT2-243ENST00000553078 ZCCHC6Q5VYS8 1495 aaKnown RBP18.65■□□□□ 0.58
CNOT2-243ENST00000553078 DCAF1Q9Y4B6 1507 aa18.32■□□□□ 0.52
CNOT2-243ENST00000553078 SHROOM4Q9ULL8 1493 aa18.26■□□□□ 0.51
CNOT2-243ENST00000553078 DCAF8L2P0C7V8 631 aa18.19■□□□□ 0.5
CNOT2-243ENST00000553078 MYO15BQ96JP2 1530 aa17.98■□□□□ 0.47
CNOT2-243ENST00000553078 NACADO15069 1562 aa17.8■□□□□ 0.44
CNOT2-243ENST00000553078 ABCC9O60706 1549 aa17.79■□□□□ 0.44
CNOT2-243ENST00000553078 SUPT5HO00267 1087 aaKnown RBP17.75■□□□□ 0.43
CNOT2-243ENST00000553078 SCRIBQ14160 1630 aa17.67■□□□□ 0.42
CNOT2-243ENST00000553078 RB1CC1Q8TDY2 1594 aa17.61■□□□□ 0.41
CNOT2-243ENST00000553078 RSF1Q96T23 1441 aaPredicted RBP17.21■□□□□ 0.35
CNOT2-243ENST00000553078 BAZ1AQ9NRL2 1556 aaPredicted RBP17.13■□□□□ 0.33
CNOT2-243ENST00000553078 CHIC1Q5VXU3 224 aa17.09■□□□□ 0.33
CNOT2-243ENST00000553078 UNC13AQ9UPW8 1703 aa17.07■□□□□ 0.32
CNOT2-243ENST00000553078 CECR2Q9BXF3 1484 aa17.05■□□□□ 0.32
CNOT2-243ENST00000553078 MROH2BQ7Z745 1585 aa17.03■□□□□ 0.32
CNOT2-243ENST00000553078 SMARCA4P51532 1647 aa16.94■□□□□ 0.3
CNOT2-243ENST00000553078 WIZO95785 1651 aa16.92■□□□□ 0.3
CNOT2-243ENST00000553078 TOP2AP11388 1531 aaKnown RBP16.86■□□□□ 0.29
CNOT2-243ENST00000553078 BICRAQ9NZM4 1560 aa16.86■□□□□ 0.29
CNOT2-243ENST00000553078 PABPN1Q86U42 306 aaKnown RBP eCLIP16.78■□□□□ 0.28
CNOT2-243ENST00000553078 TRIM41Q8WV44 630 aa16.72■□□□□ 0.27
CNOT2-243ENST00000553078 PEG3Q9GZU2 1588 aa16.69■□□□□ 0.26
CNOT2-243ENST00000553078 SMARCA2P51531 1590 aa16.66■□□□□ 0.26
CNOT2-243ENST00000553078 CCDC88BA6NC98 1476 aa16.6■□□□□ 0.25
CNOT2-243ENST00000553078 EIF4G1Q04637 1599 aaKnown RBP16.59■□□□□ 0.25
CNOT2-243ENST00000553078 BAZ1BQ9UIG0 1483 aaKnown RBP16.57■□□□□ 0.24
CNOT2-243ENST00000553078 ATAD2BQ9ULI0 1458 aa16.55■□□□□ 0.24
CNOT2-243ENST00000553078 HMGXB3Q12766 1538 aa16.44■□□□□ 0.22
CNOT2-243ENST00000553078 LOC105371045A0A1W2PR82 267 aa16.38■□□□□ 0.21
CNOT2-243ENST00000553078 EEA1Q15075 1411 aa16.36■□□□□ 0.21
CNOT2-243ENST00000553078 FAM9AQ8IZU1 332 aaPredicted RBP16.36■□□□□ 0.21
CNOT2-243ENST00000553078 ABCC8Q09428 1581 aa16.35■□□□□ 0.21
CNOT2-243ENST00000553078 NCAPD3P42695 1498 aa16.35■□□□□ 0.21
CNOT2-243ENST00000553078 WRNQ14191 1432 aaPredicted RBP eCLIP16.3■□□□□ 0.2
CNOT2-243ENST00000553078 SYNJ1O43426 1573 aa16.14■□□□□ 0.17
CNOT2-243ENST00000553078 EHMT2Q96KQ7 1210 aa16.11■□□□□ 0.17
CNOT2-243ENST00000553078 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
CNOT2-243ENST00000553078 TOP2BQ02880 1626 aa16.11■□□□□ 0.17
CNOT2-243ENST00000553078 GOLGA3Q08378 1498 aa16.1■□□□□ 0.17
CNOT2-243ENST00000553078 CC2D2AQ9P2K1 1620 aa16.1■□□□□ 0.17
CNOT2-243ENST00000553078 TRIM26Q12899 539 aaPredicted RBP16.1■□□□□ 0.17
CNOT2-243ENST00000553078 PRDM2Q13029 1718 aa16.1■□□□□ 0.17
CNOT2-243ENST00000553078 BIVM-ERCC5R4GMW8 1640 aa16.09■□□□□ 0.17
CNOT2-243ENST00000553078 CSRNP3Q8WYN3 585 aa16.09■□□□□ 0.17
CNOT2-243ENST00000553078 SOGA1O94964 1423 aa16.09■□□□□ 0.17
CNOT2-243ENST00000553078 CFTRP13569 1480 aa16.09■□□□□ 0.17
CNOT2-243ENST00000553078 CEP164Q9UPV0 1460 aa16.07■□□□□ 0.16
CNOT2-243ENST00000553078 TNIKQ9UKE5 1360 aa16.04■□□□□ 0.16
CNOT2-243ENST00000553078 KIF21BO75037 1637 aa16.04■□□□□ 0.16
CNOT2-243ENST00000553078 UBTFP17480 764 aaKnown RBP15.99■□□□□ 0.15
CNOT2-243ENST00000553078 CEP162Q5TB80 1403 aa15.99■□□□□ 0.15
CNOT2-243ENST00000553078 CADPSQ9ULU8 1353 aa15.99■□□□□ 0.15
CNOT2-243ENST00000553078 RUSC2Q8N2Y8 1516 aa15.94■□□□□ 0.14
CNOT2-243ENST00000553078 HRCP23327 699 aa15.94■□□□□ 0.14
CNOT2-243ENST00000553078 CUX1P39880 1505 aa15.93■□□□□ 0.14
CNOT2-243ENST00000553078 KIF27Q86VH2 1401 aa15.91■□□□□ 0.14
CNOT2-243ENST00000553078 ERICH3Q5RHP9 1530 aa15.89■□□□□ 0.13
CNOT2-243ENST00000553078 FANCD2Q9BXW9 1451 aa15.84■□□□□ 0.13
CNOT2-243ENST00000553078 LAMC3Q9Y6N6 1575 aa15.83■□□□□ 0.12
CNOT2-243ENST00000553078 CLIP1P30622 1438 aa15.82■□□□□ 0.12
CNOT2-243ENST00000553078 RAPGEF2Q9Y4G8 1499 aa15.79■□□□□ 0.12
CNOT2-243ENST00000553078 DNMBPQ6XZF7 1577 aa15.79■□□□□ 0.12
CNOT2-243ENST00000553078 ZEB1P37275 1124 aaPredicted RBP15.78■□□□□ 0.12
CNOT2-243ENST00000553078 FGD5Q6ZNL6 1462 aa15.77■□□□□ 0.11
CNOT2-243ENST00000553078 PRXQ9BXM0 1461 aa15.77■□□□□ 0.11
CNOT2-243ENST00000553078 CUX2O14529 1486 aa15.76■□□□□ 0.11
CNOT2-243ENST00000553078 APLP2Q06481 763 aa15.75■□□□□ 0.11
CNOT2-243ENST00000553078 VPS8Q8N3P4 1428 aa15.73■□□□□ 0.11
CNOT2-243ENST00000553078 PDS5BQ9NTI5 1447 aa15.73■□□□□ 0.11
CNOT2-243ENST00000553078 TOPBP1Q92547 1522 aa15.68■□□□□ 0.1
CNOT2-243ENST00000553078 NESP48681 1621 aa15.65■□□□□ 0.1
CNOT2-243ENST00000553078 ABCA10Q8WWZ4 1543 aa15.63■□□□□ 0.09
CNOT2-243ENST00000553078 PPARGC1BQ86YN6 1023 aaKnown RBP15.63■□□□□ 0.09
CNOT2-243ENST00000553078 CUL7Q14999 1698 aa15.61■□□□□ 0.09
CNOT2-243ENST00000553078 POLA1P09884 1462 aaPredicted RBP15.61■□□□□ 0.09
CNOT2-243ENST00000553078 CARMIL1Q5VZK9 1371 aa15.61■□□□□ 0.09
CNOT2-243ENST00000553078 RANGAP1P46060 587 aaPredicted RBP15.58■□□□□ 0.08
CNOT2-243ENST00000553078 IGF1RP08069 1367 aa15.57■□□□□ 0.08
CNOT2-243ENST00000553078 URB2Q14146 1524 aaKnown RBP15.54■□□□□ 0.08
CNOT2-243ENST00000553078 ARAP1Q96P48 1450 aa15.54■□□□□ 0.08
CNOT2-243ENST00000553078 TTBK1Q5TCY1 1321 aaPredicted RBP15.54■□□□□ 0.08
CNOT2-243ENST00000553078 WDR97A6NE52 1622 aa15.52■□□□□ 0.08
CNOT2-243ENST00000553078 RAD54L2Q9Y4B4 1467 aa15.52■□□□□ 0.07
CNOT2-243ENST00000553078 KIF21AQ7Z4S6 1674 aa15.51■□□□□ 0.07
CNOT2-243ENST00000553078 MRC2Q9UBG0 1479 aa15.48■□□□□ 0.07
CNOT2-243ENST00000553078 ARHGAP35Q9NRY4 1499 aa15.47■□□□□ 0.07
CNOT2-243ENST00000553078 ABCA5Q8WWZ7 1642 aa15.47■□□□□ 0.07
CNOT2-243ENST00000553078 FHAD1B1AJZ9 1412 aa15.47■□□□□ 0.07
CNOT2-243ENST00000553078 EFCAB5A4FU69 1503 aa15.47■□□□□ 0.07
CNOT2-243ENST00000553078 CCER1Q8TC90 406 aaPredicted RBP15.46■□□□□ 0.07
CNOT2-243ENST00000553078 GAPVD1Q14C86 1478 aa15.45■□□□□ 0.06
CNOT2-243ENST00000553078 CTTNBP2Q8WZ74 1663 aa15.44■□□□□ 0.06
CNOT2-243ENST00000553078 MAP3K1Q13233 1512 aa15.39■□□□□ 0.05
CNOT2-243ENST00000553078 ERCC6Q03468 1493 aa15.36■□□□□ 0.05
CNOT2-243ENST00000553078 IFT140Q96RY7 1462 aa15.36■□□□□ 0.05
CNOT2-243ENST00000553078 TDRD9Q8NDG6 1382 aaKnown RBP15.36■□□□□ 0.05
CNOT2-243ENST00000553078 TARBP1Q13395 1621 aaKnown RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms