RNA–Protein interactions for RNA: ENST00000261900.7

CCNT1-201, Transcript of cyclin T1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCNT1, Length 6,973 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCNT1-201ENST00000261900 DCAF8L2P0C7V8 631 aa14.98□□□□□ -0.01
CCNT1-201ENST00000261900 FAM9AQ8IZU1 332 aaPredicted RBP13.82□□□□□ -0.2
CCNT1-201ENST00000261900 SUPT5HO00267 1087 aaKnown RBP13.58□□□□□ -0.24
CCNT1-201ENST00000261900 APLP2Q06481 763 aa13.49□□□□□ -0.25
CCNT1-201ENST00000261900 EHMT2Q96KQ7 1210 aa13.35□□□□□ -0.27
CCNT1-201ENST00000261900 PELP1Q8IZL8 1130 aaKnown RBP13.23□□□□□ -0.29
CCNT1-201ENST00000261900 SHROOM4Q9ULL8 1493 aa13.18□□□□□ -0.3
CCNT1-201ENST00000261900 ATP1B4Q9UN42 357 aaPredicted RBP13.07□□□□□ -0.32
CCNT1-201ENST00000261900 NISCHQ9Y2I1 1504 aa13.07□□□□□ -0.32
CCNT1-201ENST00000261900 MYT1LQ9UL68 1186 aa12.96□□□□□ -0.34
CCNT1-201ENST00000261900 RANGAP1P46060 587 aaPredicted RBP12.96□□□□□ -0.34
CCNT1-201ENST00000261900 TTBK1Q5TCY1 1321 aaPredicted RBP12.85□□□□□ -0.35
CCNT1-201ENST00000261900 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.74□□□□□ -0.37
CCNT1-201ENST00000261900 HNRNPUL2Q1KMD3 747 aaKnown RBP12.74□□□□□ -0.37
CCNT1-201ENST00000261900 UBTFP17480 764 aaKnown RBP12.7□□□□□ -0.38
CCNT1-201ENST00000261900 CCER1Q8TC90 406 aaPredicted RBP12.68□□□□□ -0.38
CCNT1-201ENST00000261900 TRIM41Q8WV44 630 aa12.62□□□□□ -0.39
CCNT1-201ENST00000261900 ERICH6Q7L0X2 663 aa12.61□□□□□ -0.39
CCNT1-201ENST00000261900 CHIC1Q5VXU3 224 aa12.58□□□□□ -0.4
CCNT1-201ENST00000261900 PCGF6Q9BYE7 350 aa12.57□□□□□ -0.4
CCNT1-201ENST00000261900 NEFLP07196 543 aa12.45□□□□□ -0.42
CCNT1-201ENST00000261900 SLC4A1APQ9BWU0 796 aaKnown RBP12.44□□□□□ -0.42
CCNT1-201ENST00000261900 POLR3GLQ9BT43 218 aa12.41□□□□□ -0.42
CCNT1-201ENST00000261900 CENPBP07199 599 aaPredicted RBP12.37□□□□□ -0.43
CCNT1-201ENST00000261900 ZEB1P37275 1124 aaPredicted RBP12.29□□□□□ -0.44
CCNT1-201ENST00000261900 ITGAEP38570 1179 aa12.29□□□□□ -0.44
CCNT1-201ENST00000261900 DAXXQ9UER7 740 aaPredicted RBP12.28□□□□□ -0.44
CCNT1-201ENST00000261900 BCANQ96GW7 911 aa12.23□□□□□ -0.45
CCNT1-201ENST00000261900 FBLN2P98095 1184 aa12.22□□□□□ -0.45
CCNT1-201ENST00000261900 ESF1Q9H501 851 aaKnown RBP12.19□□□□□ -0.46
CCNT1-201ENST00000261900 CNGB1Q14028 1251 aaPredicted RBP12.17□□□□□ -0.46
CCNT1-201ENST00000261900 SLC24A1O60721 1099 aa12.11□□□□□ -0.47
CCNT1-201ENST00000261900 ZBTB47Q9UFB7 747 aaPredicted RBP12.06□□□□□ -0.48
CCNT1-201ENST00000261900 CLSPNQ9HAW4 1339 aa12.06□□□□□ -0.48
CCNT1-201ENST00000261900 NPM1P06748 294 aaKnown RBP eCLIP12.05□□□□□ -0.48
CCNT1-201ENST00000261900 YTHDC1Q96MU7 727 aaKnown RBP12.04□□□□□ -0.48
CCNT1-201ENST00000261900 PPARGC1BQ86YN6 1023 aaKnown RBP12.04□□□□□ -0.48
CCNT1-201ENST00000261900 PABPN1Q86U42 306 aaKnown RBP eCLIP12.03□□□□□ -0.48
CCNT1-201ENST00000261900 NEFMP07197 916 aa12.03□□□□□ -0.48
CCNT1-201ENST00000261900 TRIM52Q96A61 297 aa12.03□□□□□ -0.48
CCNT1-201ENST00000261900 PLPPR3Q6T4P5 718 aa11.99□□□□□ -0.49
CCNT1-201ENST00000261900 FAM50AQ14320 339 aaKnown RBP11.97□□□□□ -0.49
CCNT1-201ENST00000261900 STAG3Q9UJ98 1225 aa11.96□□□□□ -0.5
CCNT1-201ENST00000261900 ABCC9O60706 1549 aa11.89□□□□□ -0.51
CCNT1-201ENST00000261900 ZNF326Q5BKZ1 582 aaKnown RBP11.89□□□□□ -0.51
CCNT1-201ENST00000261900 ZNF316A6NFI3 1004 aaPredicted RBP11.89□□□□□ -0.51
CCNT1-201ENST00000261900 CDK11AQ9UQ88 783 aaPredicted RBP11.84□□□□□ -0.51
CCNT1-201ENST00000261900 CHGAP10645 457 aaKnown RBP11.8□□□□□ -0.52
CCNT1-201ENST00000261900 BCL11AQ9H165 835 aa11.79□□□□□ -0.52
CCNT1-201ENST00000261900 A0A0G2JS52 829 aa11.79□□□□□ -0.52
CCNT1-201ENST00000261900 NPM2Q86SE8 214 aaKnown RBP11.79□□□□□ -0.52
CCNT1-201ENST00000261900 SCAF1Q9H7N4 1312 aaKnown RBP11.78□□□□□ -0.52
CCNT1-201ENST00000261900 ZNF777Q9ULD5 760 aaPredicted RBP11.78□□□□□ -0.52
CCNT1-201ENST00000261900 CANXP27824 592 aaKnown RBP11.77□□□□□ -0.52
CCNT1-201ENST00000261900 ARID3CA6NKF2 412 aa11.77□□□□□ -0.53
CCNT1-201ENST00000261900 TRIM26Q12899 539 aaPredicted RBP11.74□□□□□ -0.53
CCNT1-201ENST00000261900 MYT1Q01538 1121 aa11.73□□□□□ -0.53
CCNT1-201ENST00000261900 NEUROD1Q13562 356 aa11.71□□□□□ -0.53
CCNT1-201ENST00000261900 C14orf37Q86TY3 774 aa11.68□□□□□ -0.54
CCNT1-201ENST00000261900 RTL5Q5HYW3 569 aaPredicted RBP11.68□□□□□ -0.54
CCNT1-201ENST00000261900 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
CCNT1-201ENST00000261900 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
CCNT1-201ENST00000261900 ARID4BQ4LE39 1312 aaPredicted RBP11.59□□□□□ -0.55
CCNT1-201ENST00000261900 PPP1R15AO75807 674 aaPredicted RBP11.57□□□□□ -0.56
CCNT1-201ENST00000261900 ANP32CO43423 234 aa11.57□□□□□ -0.56
CCNT1-201ENST00000261900 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
CCNT1-201ENST00000261900 CHMP7Q8WUX9 453 aaPredicted RBP11.54□□□□□ -0.56
CCNT1-201ENST00000261900 LOC105371045A0A1W2PR82 267 aa11.54□□□□□ -0.56
CCNT1-201ENST00000261900 ZBTB7CA1YPR0 619 aa11.53□□□□□ -0.56
CCNT1-201ENST00000261900 PLEKHG5O94827 1062 aa11.53□□□□□ -0.56
CCNT1-201ENST00000261900 CDK11BP21127 795 aaKnown RBP11.51□□□□□ -0.57
CCNT1-201ENST00000261900 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.51□□□□□ -0.574e-8■■■■□ 25.6
CCNT1-201ENST00000261900 TSPY4P0CV99 314 aa11.5□□□□□ -0.57
CCNT1-201ENST00000261900 TSPY10P0CW01 314 aa11.5□□□□□ -0.57
CCNT1-201ENST00000261900 HRCP23327 699 aa11.47□□□□□ -0.57
CCNT1-201ENST00000261900 NPHP1O15259 732 aa11.45□□□□□ -0.58
CCNT1-201ENST00000261900 ARXQ96QS3 562 aa11.43□□□□□ -0.58
CCNT1-201ENST00000261900 HSP90AA1P07900 732 aaKnown RBP11.43□□□□□ -0.58
CCNT1-201ENST00000261900 KCNH8Q96L42 1107 aa11.4□□□□□ -0.58
CCNT1-201ENST00000261900 LMOD2Q6P5Q4 547 aa11.39□□□□□ -0.59
CCNT1-201ENST00000261900 CSRNP3Q8WYN3 585 aa11.37□□□□□ -0.59
CCNT1-201ENST00000261900 UPF2Q9HAU5 1272 aaKnown RBP11.35□□□□□ -0.59
CCNT1-201ENST00000261900 ANP32BQ92688 251 aaKnown RBP11.35□□□□□ -0.59
CCNT1-201ENST00000261900 DIEXFQ68CQ4 756 aaKnown RBP11.34□□□□□ -0.59
CCNT1-201ENST00000261900 SENP3Q9H4L4 574 aaPredicted RBP11.32□□□□□ -0.6
CCNT1-201ENST00000261900 MYH16Q9H6N6 1097 aa11.32□□□□□ -0.6
CCNT1-201ENST00000261900 PLEKHD1A6NEE1 506 aa11.32□□□□□ -0.6
CCNT1-201ENST00000261900 TONSLQ96HA7 1378 aa11.3□□□□□ -0.6
CCNT1-201ENST00000261900 WDR43Q15061 677 aaKnown RBP eCLIP11.3□□□□□ -0.6
CCNT1-201ENST00000261900 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.3□□□□□ -0.6
CCNT1-201ENST00000261900 CHIC2Q9UKJ5 165 aa11.28□□□□□ -0.6
CCNT1-201ENST00000261900 AEBP2Q6ZN18 517 aaPredicted RBP11.28□□□□□ -0.6
CCNT1-201ENST00000261900 KDM2AQ9Y2K7 1162 aa11.27□□□□□ -0.61
CCNT1-201ENST00000261900 HDGFP51858 240 aaKnown RBP11.25□□□□□ -0.61
CCNT1-201ENST00000261900 TMC1Q8TDI8 760 aa11.25□□□□□ -0.61
CCNT1-201ENST00000261900 ANP32AP39687 249 aaKnown RBP11.22□□□□□ -0.61
CCNT1-201ENST00000261900 MTUS2Q5JR59 1369 aa11.22□□□□□ -0.61
CCNT1-201ENST00000261900 EIF4G2P78344 907 aaKnown RBP eCLIP11.22□□□□□ -0.61
CCNT1-201ENST00000261900 TULP1O00294 542 aaPredicted RBP11.22□□□□□ -0.61
CCNT1-201ENST00000261900 ERCC6Q03468 1493 aa11.21□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 7.4 ms