RNA–Protein interactions for RNA: ENST00000438045.5

PEX1-204, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2 BASIC

Gene PEX1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-204ENST00000438045 NISCHQ9Y2I1 1504 aa28.82■■■□□ 2.2
PEX1-204ENST00000438045 DCAF8L2P0C7V8 631 aa25.29■■□□□ 1.64
PEX1-204ENST00000438045 SHROOM4Q9ULL8 1493 aa24.93■■□□□ 1.58
PEX1-204ENST00000438045 CCDC180Q9P1Z9 1646 aa24.48■■□□□ 1.51
PEX1-204ENST00000438045 ABCC9O60706 1549 aa24.25■■□□□ 1.47
PEX1-204ENST00000438045 ZCCHC6Q5VYS8 1495 aaKnown RBP24.13■■□□□ 1.45
PEX1-204ENST00000438045 SUPT5HO00267 1087 aaKnown RBP24.1■■□□□ 1.45
PEX1-204ENST00000438045 SCRIBQ14160 1630 aa23.47■■□□□ 1.35
PEX1-204ENST00000438045 PABPN1Q86U42 306 aaKnown RBP eCLIP23.3■■□□□ 1.32
PEX1-204ENST00000438045 DCAF1Q9Y4B6 1507 aa23.24■■□□□ 1.31
PEX1-204ENST00000438045 NACADO15069 1562 aa23.02■■□□□ 1.28
PEX1-204ENST00000438045 RB1CC1Q8TDY2 1594 aa22.94■■□□□ 1.26
PEX1-204ENST00000438045 CECR2Q9BXF3 1484 aa22.83■■□□□ 1.25
PEX1-204ENST00000438045 MYO15BQ96JP2 1530 aa22.78■■□□□ 1.24
PEX1-204ENST00000438045 RSF1Q96T23 1441 aaPredicted RBP22.66■■□□□ 1.22
PEX1-204ENST00000438045 EHMT2Q96KQ7 1210 aa22.63■■□□□ 1.21
PEX1-204ENST00000438045 CHIC1Q5VXU3 224 aa22.59■■□□□ 1.21
PEX1-204ENST00000438045 MROH2BQ7Z745 1585 aa22.54■■□□□ 1.2
PEX1-204ENST00000438045 FAM9AQ8IZU1 332 aaPredicted RBP22.46■■□□□ 1.19
PEX1-204ENST00000438045 UNC13AQ9UPW8 1703 aa22.4■■□□□ 1.18
PEX1-204ENST00000438045 WIZO95785 1651 aa22.35■■□□□ 1.17
PEX1-204ENST00000438045 BICRAQ9NZM4 1560 aa22.29■■□□□ 1.16
PEX1-204ENST00000438045 TRIM41Q8WV44 630 aa22.25■■□□□ 1.15
PEX1-204ENST00000438045 LOC105371045A0A1W2PR82 267 aa22.24■■□□□ 1.15
PEX1-204ENST00000438045 BAZ1AQ9NRL2 1556 aaPredicted RBP22.17■■□□□ 1.14
PEX1-204ENST00000438045 SMARCA4P51532 1647 aa22.07■■□□□ 1.12
PEX1-204ENST00000438045 CCDC88BA6NC98 1476 aa21.92■■□□□ 1.1
PEX1-204ENST00000438045 BAZ1BQ9UIG0 1483 aaKnown RBP21.84■■□□□ 1.09
PEX1-204ENST00000438045 ATAD2BQ9ULI0 1458 aa21.84■■□□□ 1.09
PEX1-204ENST00000438045 TOP2AP11388 1531 aaKnown RBP21.8■■□□□ 1.08
PEX1-204ENST00000438045 ABCC8Q09428 1581 aa21.76■■□□□ 1.07
PEX1-204ENST00000438045 DNAJC5BQ9UF47 199 aa21.74■■□□□ 1.07
PEX1-204ENST00000438045 EIF4G1Q04637 1599 aaKnown RBP21.74■■□□□ 1.07
PEX1-204ENST00000438045 RANGAP1P46060 587 aaPredicted RBP21.71■■□□□ 1.07
PEX1-204ENST00000438045 SMARCA2P51531 1590 aa21.7■■□□□ 1.07
PEX1-204ENST00000438045 PPARGC1BQ86YN6 1023 aaKnown RBP21.64■■□□□ 1.05
PEX1-204ENST00000438045 TTBK1Q5TCY1 1321 aaPredicted RBP21.61■■□□□ 1.05
PEX1-204ENST00000438045 UBTFP17480 764 aaKnown RBP21.47■■□□□ 1.03
PEX1-204ENST00000438045 CC2D2AQ9P2K1 1620 aa21.46■■□□□ 1.03
PEX1-204ENST00000438045 SOGA1O94964 1423 aa21.45■■□□□ 1.02
PEX1-204ENST00000438045 PCGF6Q9BYE7 350 aa21.45■■□□□ 1.02
PEX1-204ENST00000438045 NCAPD3P42695 1498 aa21.41■■□□□ 1.02
PEX1-204ENST00000438045 WRNQ14191 1432 aaPredicted RBP eCLIP21.4■■□□□ 1.02
PEX1-204ENST00000438045 RUSC2Q8N2Y8 1516 aa21.39■■□□□ 1.02
PEX1-204ENST00000438045 PEG3Q9GZU2 1588 aa21.38■■□□□ 1.01
PEX1-204ENST00000438045 CSRNP3Q8WYN3 585 aa21.27■■□□□ 1
PEX1-204ENST00000438045 NESP48681 1621 aa21.27■■□□□ 1
PEX1-204ENST00000438045 HMGXB3Q12766 1538 aa21.2■□□□□ 0.98
PEX1-204ENST00000438045 SYNJ1O43426 1573 aa21.2■□□□□ 0.98
PEX1-204ENST00000438045 CADPSQ9ULU8 1353 aa21.16■□□□□ 0.98
PEX1-204ENST00000438045 CFTRP13569 1480 aa21.07■□□□□ 0.96
PEX1-204ENST00000438045 FANCD2Q9BXW9 1451 aa20.99■□□□□ 0.95
PEX1-204ENST00000438045 CUX1P39880 1505 aa20.98■□□□□ 0.95
PEX1-204ENST00000438045 P3H3Q8IVL6 736 aa20.93■□□□□ 0.94
PEX1-204ENST00000438045 ATP1B4Q9UN42 357 aaPredicted RBP20.91■□□□□ 0.94
PEX1-204ENST00000438045 CUX2O14529 1486 aa20.89■□□□□ 0.94
PEX1-204ENST00000438045 RAD54L2Q9Y4B4 1467 aa20.89■□□□□ 0.94
PEX1-204ENST00000438045 CEP162Q5TB80 1403 aa20.88■□□□□ 0.93
PEX1-204ENST00000438045 RAPGEF2Q9Y4G8 1499 aa20.88■□□□□ 0.93
PEX1-204ENST00000438045 TDRD9Q8NDG6 1382 aaKnown RBP20.84■□□□□ 0.93
PEX1-204ENST00000438045 FGD5Q6ZNL6 1462 aa20.84■□□□□ 0.93
PEX1-204ENST00000438045 TRIM26Q12899 539 aaPredicted RBP20.83■□□□□ 0.93
PEX1-204ENST00000438045 TOP2BQ02880 1626 aa20.81■□□□□ 0.92
PEX1-204ENST00000438045 GOLGA3Q08378 1498 aa20.8■□□□□ 0.92
PEX1-204ENST00000438045 KIF27Q86VH2 1401 aa20.78■□□□□ 0.92
PEX1-204ENST00000438045 CEP164Q9UPV0 1460 aa20.77■□□□□ 0.92
PEX1-204ENST00000438045 EEA1Q15075 1411 aa20.76■□□□□ 0.91
PEX1-204ENST00000438045 TNIKQ9UKE5 1360 aa20.74■□□□□ 0.91
PEX1-204ENST00000438045 APLP2Q06481 763 aa20.74■□□□□ 0.91
PEX1-204ENST00000438045 PDS5BQ9NTI5 1447 aa20.73■□□□□ 0.91
PEX1-204ENST00000438045 FBLN2P98095 1184 aa20.72■□□□□ 0.91
PEX1-204ENST00000438045 CLIP1P30622 1438 aa20.7■□□□□ 0.9
PEX1-204ENST00000438045 ERCC6Q03468 1493 aa20.7■□□□□ 0.9
PEX1-204ENST00000438045 TOPBP1Q92547 1522 aa20.68■□□□□ 0.9
PEX1-204ENST00000438045 ARID3CA6NKF2 412 aa20.66■□□□□ 0.9
PEX1-204ENST00000438045 URB2Q14146 1524 aaKnown RBP20.66■□□□□ 0.9
PEX1-204ENST00000438045 POLA1P09884 1462 aaPredicted RBP20.65■□□□□ 0.9
PEX1-204ENST00000438045 IGF1RP08069 1367 aa20.65■□□□□ 0.9
PEX1-204ENST00000438045 CARMIL1Q5VZK9 1371 aa20.64■□□□□ 0.89
PEX1-204ENST00000438045 BIVM-ERCC5R4GMW8 1640 aa20.62■□□□□ 0.89
PEX1-204ENST00000438045 HNRNPUL2Q1KMD3 747 aaKnown RBP20.61■□□□□ 0.89
PEX1-204ENST00000438045 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP20.56■□□□□ 0.88
PEX1-204ENST00000438045 AQRO60306 1485 aaKnown RBP eCLIP20.56■□□□□ 0.88
PEX1-204ENST00000438045 ITGAEP38570 1179 aa20.56■□□□□ 0.88
PEX1-204ENST00000438045 LAMC3Q9Y6N6 1575 aa20.56■□□□□ 0.88
PEX1-204ENST00000438045 KIF21AQ7Z4S6 1674 aa20.55■□□□□ 0.88
PEX1-204ENST00000438045 DNMBPQ6XZF7 1577 aa20.51■□□□□ 0.87
PEX1-204ENST00000438045 PRXQ9BXM0 1461 aa20.5■□□□□ 0.87
PEX1-204ENST00000438045 HRCP23327 699 aa20.49■□□□□ 0.87
PEX1-204ENST00000438045 KANK4Q5T7N3 995 aaPredicted RBP20.45■□□□□ 0.86
PEX1-204ENST00000438045 KIF21BO75037 1637 aa20.44■□□□□ 0.86
PEX1-204ENST00000438045 PRDM2Q13029 1718 aa20.42■□□□□ 0.86
PEX1-204ENST00000438045 ZNF608Q9ULD9 1512 aaPredicted RBP20.42■□□□□ 0.86
PEX1-204ENST00000438045 GAPVD1Q14C86 1478 aa20.4■□□□□ 0.86
PEX1-204ENST00000438045 CCER1Q8TC90 406 aaPredicted RBP20.4■□□□□ 0.86
PEX1-204ENST00000438045 MRC2Q9UBG0 1479 aa20.38■□□□□ 0.85
PEX1-204ENST00000438045 ARAP1Q96P48 1450 aa20.36■□□□□ 0.85
PEX1-204ENST00000438045 ABCA10Q8WWZ4 1543 aa20.35■□□□□ 0.85
PEX1-204ENST00000438045 CHMP7Q8WUX9 453 aaPredicted RBP20.35■□□□□ 0.85
PEX1-204ENST00000438045 FHOD3Q2V2M9 1422 aa20.35■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 636.9 ms