RNA–Protein interactions for RNA: ENST00000484913.5

PEX1-208, Transcript of peroxisomal biogenesis factor 1, humanhuman

TSL 2

Gene PEX1, Length 4,051 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PEX1-208ENST00000484913 NISCHQ9Y2I1 1504 aa23.89■■□□□ 1.41
PEX1-208ENST00000484913 DCAF8L2P0C7V8 631 aa21.03■□□□□ 0.96
PEX1-208ENST00000484913 SHROOM4Q9ULL8 1493 aa20.65■□□□□ 0.9
PEX1-208ENST00000484913 CCDC180Q9P1Z9 1646 aa20.36■□□□□ 0.85
PEX1-208ENST00000484913 ABCC9O60706 1549 aa20.1■□□□□ 0.81
PEX1-208ENST00000484913 SUPT5HO00267 1087 aaKnown RBP20.01■□□□□ 0.79
PEX1-208ENST00000484913 ZCCHC6Q5VYS8 1495 aaKnown RBP20■□□□□ 0.79
PEX1-208ENST00000484913 SCRIBQ14160 1630 aa19.46■□□□□ 0.71
PEX1-208ENST00000484913 DCAF1Q9Y4B6 1507 aa19.3■□□□□ 0.68
PEX1-208ENST00000484913 PABPN1Q86U42 306 aaKnown RBP eCLIP19.28■□□□□ 0.68
PEX1-208ENST00000484913 NACADO15069 1562 aa19.15■□□□□ 0.66
PEX1-208ENST00000484913 RB1CC1Q8TDY2 1594 aa19.1■□□□□ 0.65
PEX1-208ENST00000484913 MYO15BQ96JP2 1530 aa18.92■□□□□ 0.62
PEX1-208ENST00000484913 CECR2Q9BXF3 1484 aa18.86■□□□□ 0.61
PEX1-208ENST00000484913 EHMT2Q96KQ7 1210 aa18.76■□□□□ 0.59
PEX1-208ENST00000484913 RSF1Q96T23 1441 aaPredicted RBP18.76■□□□□ 0.59
PEX1-208ENST00000484913 CHIC1Q5VXU3 224 aa18.71■□□□□ 0.59
PEX1-208ENST00000484913 FAM9AQ8IZU1 332 aaPredicted RBP18.64■□□□□ 0.57
PEX1-208ENST00000484913 MROH2BQ7Z745 1585 aa18.64■□□□□ 0.57
PEX1-208ENST00000484913 UNC13AQ9UPW8 1703 aa18.54■□□□□ 0.56
PEX1-208ENST00000484913 TRIM41Q8WV44 630 aa18.53■□□□□ 0.56
PEX1-208ENST00000484913 WIZO95785 1651 aa18.49■□□□□ 0.55
PEX1-208ENST00000484913 BAZ1AQ9NRL2 1556 aaPredicted RBP18.43■□□□□ 0.54
PEX1-208ENST00000484913 BICRAQ9NZM4 1560 aa18.41■□□□□ 0.54
PEX1-208ENST00000484913 LOC105371045A0A1W2PR82 267 aa18.38■□□□□ 0.53
PEX1-208ENST00000484913 SMARCA4P51532 1647 aa18.31■□□□□ 0.52
PEX1-208ENST00000484913 BAZ1BQ9UIG0 1483 aaKnown RBP18.16■□□□□ 0.5
PEX1-208ENST00000484913 CCDC88BA6NC98 1476 aa18.14■□□□□ 0.49
PEX1-208ENST00000484913 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
PEX1-208ENST00000484913 ATAD2BQ9ULI0 1458 aa18.09■□□□□ 0.49
PEX1-208ENST00000484913 RANGAP1P46060 587 aaPredicted RBP18.03■□□□□ 0.48
PEX1-208ENST00000484913 EIF4G1Q04637 1599 aaKnown RBP18.02■□□□□ 0.48
PEX1-208ENST00000484913 ABCC8Q09428 1581 aa18■□□□□ 0.47
PEX1-208ENST00000484913 SMARCA2P51531 1590 aa17.98■□□□□ 0.47
PEX1-208ENST00000484913 TTBK1Q5TCY1 1321 aaPredicted RBP17.94■□□□□ 0.46
PEX1-208ENST00000484913 PPARGC1BQ86YN6 1023 aaKnown RBP17.9■□□□□ 0.46
PEX1-208ENST00000484913 UBTFP17480 764 aaKnown RBP17.89■□□□□ 0.46
PEX1-208ENST00000484913 DNAJC5BQ9UF47 199 aa17.83■□□□□ 0.45
PEX1-208ENST00000484913 PCGF6Q9BYE7 350 aa17.82■□□□□ 0.44
PEX1-208ENST00000484913 CC2D2AQ9P2K1 1620 aa17.79■□□□□ 0.44
PEX1-208ENST00000484913 WRNQ14191 1432 aaPredicted RBP eCLIP17.78■□□□□ 0.44
PEX1-208ENST00000484913 NCAPD3P42695 1498 aa17.75■□□□□ 0.43
PEX1-208ENST00000484913 SOGA1O94964 1423 aa17.73■□□□□ 0.43
PEX1-208ENST00000484913 PEG3Q9GZU2 1588 aa17.72■□□□□ 0.43
PEX1-208ENST00000484913 CSRNP3Q8WYN3 585 aa17.68■□□□□ 0.42
PEX1-208ENST00000484913 RUSC2Q8N2Y8 1516 aa17.65■□□□□ 0.42
PEX1-208ENST00000484913 HMGXB3Q12766 1538 aa17.61■□□□□ 0.41
PEX1-208ENST00000484913 NESP48681 1621 aa17.57■□□□□ 0.4
PEX1-208ENST00000484913 CADPSQ9ULU8 1353 aa17.56■□□□□ 0.4
PEX1-208ENST00000484913 SYNJ1O43426 1573 aa17.54■□□□□ 0.4
PEX1-208ENST00000484913 CFTRP13569 1480 aa17.46■□□□□ 0.39
PEX1-208ENST00000484913 ATP1B4Q9UN42 357 aaPredicted RBP17.44■□□□□ 0.38
PEX1-208ENST00000484913 FANCD2Q9BXW9 1451 aa17.42■□□□□ 0.38
PEX1-208ENST00000484913 APLP2Q06481 763 aa17.4■□□□□ 0.38
PEX1-208ENST00000484913 CUX1P39880 1505 aa17.36■□□□□ 0.37
PEX1-208ENST00000484913 P3H3Q8IVL6 736 aa17.36■□□□□ 0.37
PEX1-208ENST00000484913 CUX2O14529 1486 aa17.36■□□□□ 0.37
PEX1-208ENST00000484913 TRIM26Q12899 539 aaPredicted RBP17.35■□□□□ 0.37
PEX1-208ENST00000484913 CEP162Q5TB80 1403 aa17.34■□□□□ 0.37
PEX1-208ENST00000484913 EEA1Q15075 1411 aa17.32■□□□□ 0.36
PEX1-208ENST00000484913 GOLGA3Q08378 1498 aa17.32■□□□□ 0.36
PEX1-208ENST00000484913 KIF27Q86VH2 1401 aa17.31■□□□□ 0.36
PEX1-208ENST00000484913 RAD54L2Q9Y4B4 1467 aa17.29■□□□□ 0.36
PEX1-208ENST00000484913 FGD5Q6ZNL6 1462 aa17.29■□□□□ 0.36
PEX1-208ENST00000484913 RAPGEF2Q9Y4G8 1499 aa17.29■□□□□ 0.36
PEX1-208ENST00000484913 CEP164Q9UPV0 1460 aa17.28■□□□□ 0.36
PEX1-208ENST00000484913 TOP2BQ02880 1626 aa17.27■□□□□ 0.36
PEX1-208ENST00000484913 TDRD9Q8NDG6 1382 aaKnown RBP17.27■□□□□ 0.35
PEX1-208ENST00000484913 PDS5BQ9NTI5 1447 aa17.26■□□□□ 0.35
PEX1-208ENST00000484913 ERCC6Q03468 1493 aa17.25■□□□□ 0.35
PEX1-208ENST00000484913 FBLN2P98095 1184 aa17.25■□□□□ 0.35
PEX1-208ENST00000484913 TNIKQ9UKE5 1360 aa17.24■□□□□ 0.35
PEX1-208ENST00000484913 CLIP1P30622 1438 aa17.22■□□□□ 0.35
PEX1-208ENST00000484913 CARMIL1Q5VZK9 1371 aa17.15■□□□□ 0.34
PEX1-208ENST00000484913 TOPBP1Q92547 1522 aa17.15■□□□□ 0.34
PEX1-208ENST00000484913 ARID3CA6NKF2 412 aa17.14■□□□□ 0.33
PEX1-208ENST00000484913 HNRNPUL2Q1KMD3 747 aaKnown RBP17.14■□□□□ 0.33
PEX1-208ENST00000484913 POLA1P09884 1462 aaPredicted RBP17.12■□□□□ 0.33
PEX1-208ENST00000484913 BIVM-ERCC5R4GMW8 1640 aa17.11■□□□□ 0.33
PEX1-208ENST00000484913 ITGAEP38570 1179 aa17.1■□□□□ 0.33
PEX1-208ENST00000484913 IGF1RP08069 1367 aa17.1■□□□□ 0.33
PEX1-208ENST00000484913 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
PEX1-208ENST00000484913 LAMC3Q9Y6N6 1575 aa17.09■□□□□ 0.33
PEX1-208ENST00000484913 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.06■□□□□ 0.32
PEX1-208ENST00000484913 DNMBPQ6XZF7 1577 aa17.04■□□□□ 0.32
PEX1-208ENST00000484913 KIF21AQ7Z4S6 1674 aa17.03■□□□□ 0.32
PEX1-208ENST00000484913 AQRO60306 1485 aaKnown RBP eCLIP17.03■□□□□ 0.32
PEX1-208ENST00000484913 HRCP23327 699 aa17.02■□□□□ 0.32
PEX1-208ENST00000484913 CCER1Q8TC90 406 aaPredicted RBP17.02■□□□□ 0.32
PEX1-208ENST00000484913 PRDM2Q13029 1718 aa16.99■□□□□ 0.31
PEX1-208ENST00000484913 KIF21BO75037 1637 aa16.99■□□□□ 0.31
PEX1-208ENST00000484913 PRXQ9BXM0 1461 aa16.98■□□□□ 0.31
PEX1-208ENST00000484913 CHMP7Q8WUX9 453 aaPredicted RBP16.95■□□□□ 0.3
PEX1-208ENST00000484913 GAPVD1Q14C86 1478 aa16.95■□□□□ 0.3
PEX1-208ENST00000484913 MRC2Q9UBG0 1479 aa16.94■□□□□ 0.3
PEX1-208ENST00000484913 KANK4Q5T7N3 995 aaPredicted RBP16.91■□□□□ 0.3
PEX1-208ENST00000484913 VPS8Q8N3P4 1428 aa16.91■□□□□ 0.3
PEX1-208ENST00000484913 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
PEX1-208ENST00000484913 FHOD3Q2V2M9 1422 aa16.88■□□□□ 0.29
PEX1-208ENST00000484913 ZNF608Q9ULD9 1512 aaPredicted RBP16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 1911.9 ms