RNA–Protein interactions for RNA: ENST00000515174.5

SNF8-214, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 823 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-214ENST00000515174 NISCHQ9Y2I1 1504 aa23.16■■□□□ 1.3
SNF8-214ENST00000515174 CCDC180Q9P1Z9 1646 aa20.53■□□□□ 0.88
SNF8-214ENST00000515174 ABCC9O60706 1549 aa20.34■□□□□ 0.85
SNF8-214ENST00000515174 ZCCHC6Q5VYS8 1495 aaKnown RBP19.47■□□□□ 0.71
SNF8-214ENST00000515174 DNAJC5BQ9UF47 199 aa19.36■□□□□ 0.69
SNF8-214ENST00000515174 DCAF1Q9Y4B6 1507 aa19.16■□□□□ 0.66
SNF8-214ENST00000515174 RB1CC1Q8TDY2 1594 aa19.15■□□□□ 0.66
SNF8-214ENST00000515174 NACADO15069 1562 aa19.03■□□□□ 0.64
SNF8-214ENST00000515174 MYO15BQ96JP2 1530 aa19.02■□□□□ 0.64
SNF8-214ENST00000515174 DCAF8L2P0C7V8 631 aa18.97■□□□□ 0.63
SNF8-214ENST00000515174 PABPN1Q86U42 306 aaKnown RBP eCLIP18.93■□□□□ 0.62
SNF8-214ENST00000515174 UNC13AQ9UPW8 1703 aa18.8■□□□□ 0.6
SNF8-214ENST00000515174 SCRIBQ14160 1630 aa18.78■□□□□ 0.6
SNF8-214ENST00000515174 SHROOM4Q9ULL8 1493 aa18.61■□□□□ 0.57
SNF8-214ENST00000515174 BICRAQ9NZM4 1560 aa18.54■□□□□ 0.56
SNF8-214ENST00000515174 CECR2Q9BXF3 1484 aa18.35■□□□□ 0.53
SNF8-214ENST00000515174 CC2D2AQ9P2K1 1620 aa18.29■□□□□ 0.52
SNF8-214ENST00000515174 EIF4G1Q04637 1599 aaKnown RBP18.15■□□□□ 0.5
SNF8-214ENST00000515174 DNAJC5Q9H3Z4 198 aa18.06■□□□□ 0.48
SNF8-214ENST00000515174 SMARCA4P51532 1647 aa17.97■□□□□ 0.47
SNF8-214ENST00000515174 BAZ1AQ9NRL2 1556 aaPredicted RBP17.94■□□□□ 0.46
SNF8-214ENST00000515174 SUPT5HO00267 1087 aaKnown RBP17.93■□□□□ 0.46
SNF8-214ENST00000515174 MROH2BQ7Z745 1585 aa17.9■□□□□ 0.46
SNF8-214ENST00000515174 WIZO95785 1651 aa17.82■□□□□ 0.44
SNF8-214ENST00000515174 RSF1Q96T23 1441 aaPredicted RBP17.78■□□□□ 0.44
SNF8-214ENST00000515174 PEG3Q9GZU2 1588 aa17.73■□□□□ 0.43
SNF8-214ENST00000515174 SMARCA2P51531 1590 aa17.66■□□□□ 0.42
SNF8-214ENST00000515174 ERCC6Q03468 1493 aa17.63■□□□□ 0.41
SNF8-214ENST00000515174 CUX2O14529 1486 aa17.63■□□□□ 0.41
SNF8-214ENST00000515174 ATAD2BQ9ULI0 1458 aa17.62■□□□□ 0.41
SNF8-214ENST00000515174 TOP2AP11388 1531 aaKnown RBP17.61■□□□□ 0.41
SNF8-214ENST00000515174 HMGXB3Q12766 1538 aa17.57■□□□□ 0.4
SNF8-214ENST00000515174 BAZ1BQ9UIG0 1483 aaKnown RBP17.53■□□□□ 0.4
SNF8-214ENST00000515174 NCAPD3P42695 1498 aa17.46■□□□□ 0.39
SNF8-214ENST00000515174 CHIC1Q5VXU3 224 aa17.37■□□□□ 0.37
SNF8-214ENST00000515174 NESP48681 1621 aa17.34■□□□□ 0.37
SNF8-214ENST00000515174 CCDC88BA6NC98 1476 aa17.3■□□□□ 0.36
SNF8-214ENST00000515174 PRDM2Q13029 1718 aa17.27■□□□□ 0.35
SNF8-214ENST00000515174 TRIM41Q8WV44 630 aa17.24■□□□□ 0.35
SNF8-214ENST00000515174 THOC2Q8NI27 1593 aaKnown RBP17.17■□□□□ 0.34
SNF8-214ENST00000515174 LAMC3Q9Y6N6 1575 aa17.12■□□□□ 0.33
SNF8-214ENST00000515174 PDS5BQ9NTI5 1447 aa17.11■□□□□ 0.33
SNF8-214ENST00000515174 KIF21AQ7Z4S6 1674 aa17.05■□□□□ 0.32
SNF8-214ENST00000515174 CFTRP13569 1480 aa17.03■□□□□ 0.32
SNF8-214ENST00000515174 CADPSQ9ULU8 1353 aa16.96■□□□□ 0.31
SNF8-214ENST00000515174 ABCC8Q09428 1581 aa16.96■□□□□ 0.31
SNF8-214ENST00000515174 MRC2Q9UBG0 1479 aa16.95■□□□□ 0.3
SNF8-214ENST00000515174 WDR62O43379 1518 aa16.87■□□□□ 0.29
SNF8-214ENST00000515174 FANCD2Q9BXW9 1451 aa16.86■□□□□ 0.29
SNF8-214ENST00000515174 SYNJ1O43426 1573 aa16.85■□□□□ 0.29
SNF8-214ENST00000515174 OSCARQ8IYS5 282 aa16.85■□□□□ 0.29
SNF8-214ENST00000515174 BIVM-ERCC5R4GMW8 1640 aa16.85■□□□□ 0.29
SNF8-214ENST00000515174 CEP164Q9UPV0 1460 aa16.83■□□□□ 0.28
SNF8-214ENST00000515174 CUX1P39880 1505 aa16.79■□□□□ 0.28
SNF8-214ENST00000515174 TOP2BQ02880 1626 aa16.78■□□□□ 0.28
SNF8-214ENST00000515174 WRNQ14191 1432 aaPredicted RBP eCLIP16.77■□□□□ 0.27
SNF8-214ENST00000515174 DNMBPQ6XZF7 1577 aa16.76■□□□□ 0.27
SNF8-214ENST00000515174 URB2Q14146 1524 aaKnown RBP16.72■□□□□ 0.27
SNF8-214ENST00000515174 TOPBP1Q92547 1522 aa16.69■□□□□ 0.26
SNF8-214ENST00000515174 WDR97A6NE52 1622 aa16.65■□□□□ 0.26
SNF8-214ENST00000515174 EEA1Q15075 1411 aa16.64■□□□□ 0.25
SNF8-214ENST00000515174 FGD5Q6ZNL6 1462 aa16.62■□□□□ 0.25
SNF8-214ENST00000515174 LOC105371045A0A1W2PR82 267 aa16.6■□□□□ 0.25
SNF8-214ENST00000515174 RIMBP3CA6NJZ7 1639 aa16.58■□□□□ 0.24
SNF8-214ENST00000515174 RIMBP3BA6NNM3 1639 aa16.58■□□□□ 0.24
SNF8-214ENST00000515174 RIMBP3Q9UFD9 1639 aa16.58■□□□□ 0.24
SNF8-214ENST00000515174 POLA1P09884 1462 aaPredicted RBP16.57■□□□□ 0.24
SNF8-214ENST00000515174 TARBP1Q13395 1621 aaKnown RBP16.53■□□□□ 0.24
SNF8-214ENST00000515174 CYB5RLQ6IPT4 315 aa16.51■□□□□ 0.23
SNF8-214ENST00000515174 ARHGEF11O15085 1522 aa16.5■□□□□ 0.23
SNF8-214ENST00000515174 TRHP20396 242 aaPredicted RBP16.5■□□□□ 0.23
SNF8-214ENST00000515174 ZNF608Q9ULD9 1512 aaPredicted RBP16.5■□□□□ 0.23
SNF8-214ENST00000515174 IFT140Q96RY7 1462 aa16.49■□□□□ 0.23
SNF8-214ENST00000515174 FAM9AQ8IZU1 332 aaPredicted RBP16.49■□□□□ 0.23
SNF8-214ENST00000515174 RAD54L2Q9Y4B4 1467 aa16.48■□□□□ 0.23
SNF8-214ENST00000515174 SOGA1O94964 1423 aa16.48■□□□□ 0.23
SNF8-214ENST00000515174 CSRNP3Q8WYN3 585 aa16.48■□□□□ 0.23
SNF8-214ENST00000515174 ABCA5Q8WWZ7 1642 aa16.48■□□□□ 0.23
SNF8-214ENST00000515174 PBRM1Q86U86 1689 aa16.47■□□□□ 0.23
SNF8-214ENST00000515174 ABCA10Q8WWZ4 1543 aa16.45■□□□□ 0.22
SNF8-214ENST00000515174 RUSC2Q8N2Y8 1516 aa16.44■□□□□ 0.22
SNF8-214ENST00000515174 EIF4G3O43432 1585 aaKnown RBP16.43■□□□□ 0.22
SNF8-214ENST00000515174 FBLN2P98095 1184 aa16.42■□□□□ 0.22
SNF8-214ENST00000515174 TNIKQ9UKE5 1360 aa16.35■□□□□ 0.21
SNF8-214ENST00000515174 KIF27Q86VH2 1401 aa16.33■□□□□ 0.2
SNF8-214ENST00000515174 AQRO60306 1485 aaKnown RBP eCLIP16.33■□□□□ 0.25e-6■■■□□ 16.9
SNF8-214ENST00000515174 CUL7Q14999 1698 aa16.32■□□□□ 0.2
SNF8-214ENST00000515174 KIF21BO75037 1637 aa16.31■□□□□ 0.2
SNF8-214ENST00000515174 ARAP1Q96P48 1450 aa16.31■□□□□ 0.2
SNF8-214ENST00000515174 AEBP2Q6ZN18 517 aaPredicted RBP16.31■□□□□ 0.2
SNF8-214ENST00000515174 GOLGA3Q08378 1498 aa16.3■□□□□ 0.2
SNF8-214ENST00000515174 CHD1O14646 1710 aa16.3■□□□□ 0.2
SNF8-214ENST00000515174 ADAMTS12P58397 1594 aa16.29■□□□□ 0.2
SNF8-214ENST00000515174 GAPVD1Q14C86 1478 aa16.29■□□□□ 0.2
SNF8-214ENST00000515174 ERICH3Q5RHP9 1530 aa16.27■□□□□ 0.2
SNF8-214ENST00000515174 TDRD9Q8NDG6 1382 aaKnown RBP16.26■□□□□ 0.19
SNF8-214ENST00000515174 PRXQ9BXM0 1461 aa16.24■□□□□ 0.19
SNF8-214ENST00000515174 GRIN2BQ13224 1484 aa16.21■□□□□ 0.19
SNF8-214ENST00000515174 SNAPC4Q5SXM2 1469 aa16.2■□□□□ 0.18
SNF8-214ENST00000515174 CTTNBP2Q8WZ74 1663 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 141.9 ms