RNA–Protein interactions for RNA: ENST00000372538.7

COMTD1-201, Transcript of catechol-O-methyltransferase domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COMTD1, Length 976 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMTD1-201ENST00000372538 NISCHQ9Y2I1 1504 aa45.65■■■■■ 4.9
COMTD1-201ENST00000372538 CCDC180Q9P1Z9 1646 aa40.63■■■■■ 4.09
COMTD1-201ENST00000372538 ABCC9O60706 1549 aa40.06■■■■■ 4
COMTD1-201ENST00000372538 RB1CC1Q8TDY2 1594 aa38.37■■■■□ 3.73
COMTD1-201ENST00000372538 NACADO15069 1562 aa38.29■■■■□ 3.72
COMTD1-201ENST00000372538 DCAF8L2P0C7V8 631 aa38.24■■■■□ 3.71
COMTD1-201ENST00000372538 MYO15BQ96JP2 1530 aa38■■■■□ 3.67
COMTD1-201ENST00000372538 ZCCHC6Q5VYS8 1495 aaKnown RBP37.95■■■■□ 3.67
COMTD1-201ENST00000372538 DCAF1Q9Y4B6 1507 aa37.74■■■■□ 3.63
COMTD1-201ENST00000372538 UNC13AQ9UPW8 1703 aa37.56■■■■□ 3.6
COMTD1-201ENST00000372538 PABPN1Q86U42 306 aaKnown RBP eCLIP37.45■■■■□ 3.59
COMTD1-201ENST00000372538 BICRAQ9NZM4 1560 aa37.33■■■■□ 3.57
COMTD1-201ENST00000372538 DNAJC5BQ9UF47 199 aa37.17■■■■□ 3.54
COMTD1-201ENST00000372538 SCRIBQ14160 1630 aa37.07■■■■□ 3.52
COMTD1-201ENST00000372538 SHROOM4Q9ULL8 1493 aa36.78■■■■□ 3.48
COMTD1-201ENST00000372538 EIF4G1Q04637 1599 aaKnown RBP36.3■■■■□ 3.4
COMTD1-201ENST00000372538 CC2D2AQ9P2K1 1620 aa36.23■■■■□ 3.39
COMTD1-201ENST00000372538 CECR2Q9BXF3 1484 aa36.02■■■■□ 3.36
COMTD1-201ENST00000372538 SMARCA4P51532 1647 aa35.45■■■■□ 3.27
COMTD1-201ENST00000372538 NCAPD3P42695 1498 aa35.4■■■■□ 3.26
COMTD1-201ENST00000372538 ATAD2BQ9ULI0 1458 aa35.36■■■■□ 3.25
COMTD1-201ENST00000372538 BAZ1AQ9NRL2 1556 aaPredicted RBP35.34■■■■□ 3.25
COMTD1-201ENST00000372538 SMARCA2P51531 1590 aa35.24■■■■□ 3.23
COMTD1-201ENST00000372538 MROH2BQ7Z745 1585 aa35.2■■■■□ 3.23
COMTD1-201ENST00000372538 PEG3Q9GZU2 1588 aa35.13■■■■□ 3.21
COMTD1-201ENST00000372538 HMGXB3Q12766 1538 aa35.12■■■■□ 3.21
COMTD1-201ENST00000372538 BAZ1BQ9UIG0 1483 aaKnown RBP34.99■■■■□ 3.19
COMTD1-201ENST00000372538 WIZO95785 1651 aa34.79■■■■□ 3.16
COMTD1-201ENST00000372538 RSF1Q96T23 1441 aaPredicted RBP34.71■■■■□ 3.15
COMTD1-201ENST00000372538 NESP48681 1621 aa34.63■■■■□ 3.13
COMTD1-201ENST00000372538 ERCC6Q03468 1493 aa34.48■■■■□ 3.11
COMTD1-201ENST00000372538 LAMC3Q9Y6N6 1575 aa34.43■■■■□ 3.1
COMTD1-201ENST00000372538 TOP2AP11388 1531 aaKnown RBP34.35■■■■□ 3.09
COMTD1-201ENST00000372538 CADPSQ9ULU8 1353 aa34.34■■■■□ 3.09
COMTD1-201ENST00000372538 CUX2O14529 1486 aa34.25■■■■□ 3.07
COMTD1-201ENST00000372538 PDS5BQ9NTI5 1447 aa34.21■■■■□ 3.07
COMTD1-201ENST00000372538 KIF21AQ7Z4S6 1674 aa34.15■■■■□ 3.06
COMTD1-201ENST00000372538 THOC2Q8NI27 1593 aaKnown RBP34.11■■■■□ 3.05
COMTD1-201ENST00000372538 CFTRP13569 1480 aa34.07■■■■□ 3.05
COMTD1-201ENST00000372538 CCDC88BA6NC98 1476 aa34.03■■■■□ 3.04
COMTD1-201ENST00000372538 FANCD2Q9BXW9 1451 aa33.9■■■■□ 3.02
COMTD1-201ENST00000372538 MRC2Q9UBG0 1479 aa33.88■■■■□ 3.01
COMTD1-201ENST00000372538 CEP164Q9UPV0 1460 aa33.85■■■■□ 3.01
COMTD1-201ENST00000372538 WDR62O43379 1518 aa33.79■■■■□ 3
COMTD1-201ENST00000372538 PRDM2Q13029 1718 aa33.7■■■□□ 2.99
COMTD1-201ENST00000372538 URB2Q14146 1524 aaKnown RBP33.63■■■□□ 2.97
COMTD1-201ENST00000372538 DNAJC5Q9H3Z4 198 aa33.62■■■□□ 2.97
COMTD1-201ENST00000372538 SUPT5HO00267 1087 aaKnown RBP33.6■■■□□ 2.97
COMTD1-201ENST00000372538 TOPBP1Q92547 1522 aa33.35■■■□□ 2.93
COMTD1-201ENST00000372538 ABCC8Q09428 1581 aa33.29■■■□□ 2.92
COMTD1-201ENST00000372538 DNMBPQ6XZF7 1577 aa33.26■■■□□ 2.91
COMTD1-201ENST00000372538 IFT140Q96RY7 1462 aa33.18■■■□□ 2.9
COMTD1-201ENST00000372538 ZNF608Q9ULD9 1512 aaPredicted RBP33.12■■■□□ 2.89
COMTD1-201ENST00000372538 POLA1P09884 1462 aaPredicted RBP33.05■■■□□ 2.88
COMTD1-201ENST00000372538 CUX1P39880 1505 aa33.02■■■□□ 2.88
COMTD1-201ENST00000372538 TARBP1Q13395 1621 aaKnown RBP33.02■■■□□ 2.88
COMTD1-201ENST00000372538 RAD54L2Q9Y4B4 1467 aa32.94■■■□□ 2.86
COMTD1-201ENST00000372538 SOGA1O94964 1423 aa32.93■■■□□ 2.86
COMTD1-201ENST00000372538 FGD5Q6ZNL6 1462 aa32.92■■■□□ 2.86
COMTD1-201ENST00000372538 AQRO60306 1485 aaKnown RBP eCLIP32.9■■■□□ 2.864e-7■■■■□ 19.7
COMTD1-201ENST00000372538 EIF4G3O43432 1585 aaKnown RBP32.89■■■□□ 2.86
COMTD1-201ENST00000372538 OSCARQ8IYS5 282 aa32.84■■■□□ 2.85
COMTD1-201ENST00000372538 TDRD9Q8NDG6 1382 aaKnown RBP32.79■■■□□ 2.84
COMTD1-201ENST00000372538 WRNQ14191 1432 aaPredicted RBP eCLIP32.68■■■□□ 2.82
COMTD1-201ENST00000372538 WDR97A6NE52 1622 aa32.66■■■□□ 2.82
COMTD1-201ENST00000372538 TOP2BQ02880 1626 aa32.63■■■□□ 2.81
COMTD1-201ENST00000372538 BIVM-ERCC5R4GMW8 1640 aa32.63■■■□□ 2.81
COMTD1-201ENST00000372538 SYNJ1O43426 1573 aa32.63■■■□□ 2.81
COMTD1-201ENST00000372538 ABCA10Q8WWZ4 1543 aa32.6■■■□□ 2.81
COMTD1-201ENST00000372538 CHD1O14646 1710 aa32.54■■■□□ 2.8
COMTD1-201ENST00000372538 GRIN2BQ13224 1484 aa32.54■■■□□ 2.8
COMTD1-201ENST00000372538 SNAPC4Q5SXM2 1469 aa32.53■■■□□ 2.8
COMTD1-201ENST00000372538 GAPVD1Q14C86 1478 aa32.52■■■□□ 2.8
COMTD1-201ENST00000372538 FBLN2P98095 1184 aa32.5■■■□□ 2.79
COMTD1-201ENST00000372538 ABCA5Q8WWZ7 1642 aa32.48■■■□□ 2.79
COMTD1-201ENST00000372538 MAGI1Q96QZ7 1491 aaPredicted RBP32.46■■■□□ 2.79
COMTD1-201ENST00000372538 PBRM1Q86U86 1689 aa32.42■■■□□ 2.78
COMTD1-201ENST00000372538 CHMP7Q8WUX9 453 aaPredicted RBP32.38■■■□□ 2.77
COMTD1-201ENST00000372538 SYNJ2O15056 1496 aa32.35■■■□□ 2.77
COMTD1-201ENST00000372538 TRIM41Q8WV44 630 aa32.32■■■□□ 2.76
COMTD1-201ENST00000372538 RIMBP3CA6NJZ7 1639 aa32.31■■■□□ 2.76
COMTD1-201ENST00000372538 RIMBP3BA6NNM3 1639 aa32.31■■■□□ 2.76
COMTD1-201ENST00000372538 RIMBP3Q9UFD9 1639 aa32.31■■■□□ 2.76
COMTD1-201ENST00000372538 ARHGEF11O15085 1522 aa32.27■■■□□ 2.76
COMTD1-201ENST00000372538 CLASP1Q7Z460 1538 aa32.21■■■□□ 2.75
COMTD1-201ENST00000372538 ERICH3Q5RHP9 1530 aa32.18■■■□□ 2.74
COMTD1-201ENST00000372538 ADAMTS12P58397 1594 aa32.16■■■□□ 2.74
COMTD1-201ENST00000372538 FHAD1B1AJZ9 1412 aa32.12■■■□□ 2.73
COMTD1-201ENST00000372538 GRIN2AQ12879 1464 aa32.11■■■□□ 2.73
COMTD1-201ENST00000372538 CYB5RLQ6IPT4 315 aa32.04■■■□□ 2.72
COMTD1-201ENST00000372538 NUP160Q12769 1436 aa32.01■■■□□ 2.72
COMTD1-201ENST00000372538 ARAP1Q96P48 1450 aa32.01■■■□□ 2.71
COMTD1-201ENST00000372538 IGF1RP08069 1367 aa32■■■□□ 2.71
COMTD1-201ENST00000372538 KIF27Q86VH2 1401 aa32■■■□□ 2.71
COMTD1-201ENST00000372538 CEP170Q5SW79 1584 aa31.99■■■□□ 2.71
COMTD1-201ENST00000372538 ERCC6L2Q5T890 1561 aa31.8■■■□□ 2.68
COMTD1-201ENST00000372538 CUL7Q14999 1698 aa31.8■■■□□ 2.68
COMTD1-201ENST00000372538 SHROOM2Q13796 1616 aa31.79■■■□□ 2.68
COMTD1-201ENST00000372538 CARMIL1Q5VZK9 1371 aa31.75■■■□□ 2.67
COMTD1-201ENST00000372538 RUSC2Q8N2Y8 1516 aa31.74■■■□□ 2.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms