RNA–Protein interactions for RNA: ENST00000523853.1

MCM4-214, Transcript of minichromosome maintenance complex component 4, humanhuman

TSL 2

Gene MCM4, Length 354 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM4-214ENST00000523853 AEBP2Q6ZN18 517 aaPredicted RBP22.61■■□□□ 1.21
MCM4-214ENST00000523853 CHIC1Q5VXU3 224 aa21.42■■□□□ 1.02
MCM4-214ENST00000523853 NISCHQ9Y2I1 1504 aa20.42■□□□□ 0.86
MCM4-214ENST00000523853 SENP3Q9H4L4 574 aaPredicted RBP19.22■□□□□ 0.67
MCM4-214ENST00000523853 PHF23Q9BUL5 403 aaPredicted RBP19.04■□□□□ 0.64
MCM4-214ENST00000523853 CCDC180Q9P1Z9 1646 aa18.12■□□□□ 0.49
MCM4-214ENST00000523853 FOXD1Q16676 465 aa17.97■□□□□ 0.47
MCM4-214ENST00000523853 ABCC9O60706 1549 aa17.42■□□□□ 0.38
MCM4-214ENST00000523853 PLPPR3Q6T4P5 718 aa17.12■□□□□ 0.33
MCM4-214ENST00000523853 DCAF8L2P0C7V8 631 aa17.06■□□□□ 0.32
MCM4-214ENST00000523853 ZCCHC6Q5VYS8 1495 aaKnown RBP17.05■□□□□ 0.32
MCM4-214ENST00000523853 NACADO15069 1562 aa16.97■□□□□ 0.31
MCM4-214ENST00000523853 RB1CC1Q8TDY2 1594 aa16.94■□□□□ 0.3
MCM4-214ENST00000523853 MYO15BQ96JP2 1530 aa16.93■□□□□ 0.3
MCM4-214ENST00000523853 DCAF1Q9Y4B6 1507 aa16.93■□□□□ 0.3
MCM4-214ENST00000523853 PPP6R1Q9UPN7 881 aa16.86■□□□□ 0.29
MCM4-214ENST00000523853 ADRA2BP18089 450 aa16.83■□□□□ 0.28
MCM4-214ENST00000523853 PIAS4Q8N2W9 510 aaPredicted RBP16.82■□□□□ 0.28
MCM4-214ENST00000523853 MSH5O43196 834 aa16.75■□□□□ 0.27
MCM4-214ENST00000523853 UNC13AQ9UPW8 1703 aa16.55■□□□□ 0.24
MCM4-214ENST00000523853 SCRIBQ14160 1630 aa16.5■□□□□ 0.23
MCM4-214ENST00000523853 POTEDQ86YR6 584 aa16.39■□□□□ 0.21
MCM4-214ENST00000523853 SHROOM4Q9ULL8 1493 aa16.37■□□□□ 0.21
MCM4-214ENST00000523853 BICRAQ9NZM4 1560 aa16.33■□□□□ 0.2
MCM4-214ENST00000523853 PABPN1Q86U42 306 aaKnown RBP eCLIP16.32■□□□□ 0.2
MCM4-214ENST00000523853 EIF4G1Q04637 1599 aaKnown RBP15.92■□□□□ 0.14
MCM4-214ENST00000523853 BAZ1AQ9NRL2 1556 aaPredicted RBP15.85■□□□□ 0.13
MCM4-214ENST00000523853 CECR2Q9BXF3 1484 aa15.83■□□□□ 0.12
MCM4-214ENST00000523853 SMARCA4P51532 1647 aa15.81■□□□□ 0.12
MCM4-214ENST00000523853 CC2D2AQ9P2K1 1620 aa15.8■□□□□ 0.12
MCM4-214ENST00000523853 MROH2BQ7Z745 1585 aa15.71■□□□□ 0.11
MCM4-214ENST00000523853 DNAJC5BQ9UF47 199 aa15.71■□□□□ 0.11
MCM4-214ENST00000523853 SMARCA2P51531 1590 aa15.69■□□□□ 0.1
MCM4-214ENST00000523853 PEG3Q9GZU2 1588 aa15.66■□□□□ 0.1
MCM4-214ENST00000523853 ATAD2BQ9ULI0 1458 aa15.64■□□□□ 0.09
MCM4-214ENST00000523853 RSF1Q96T23 1441 aaPredicted RBP15.61■□□□□ 0.09
MCM4-214ENST00000523853 NCAPD3P42695 1498 aa15.6■□□□□ 0.09
MCM4-214ENST00000523853 WIZO95785 1651 aa15.59■□□□□ 0.09
MCM4-214ENST00000523853 SUPT5HO00267 1087 aaKnown RBP15.58■□□□□ 0.08
MCM4-214ENST00000523853 HMGXB3Q12766 1538 aa15.58■□□□□ 0.08
MCM4-214ENST00000523853 BAZ1BQ9UIG0 1483 aaKnown RBP15.56■□□□□ 0.08
MCM4-214ENST00000523853 MAPK8IP2Q13387 824 aaPredicted RBP15.47■□□□□ 0.07
MCM4-214ENST00000523853 TOP2AP11388 1531 aaKnown RBP15.45■□□□□ 0.06
MCM4-214ENST00000523853 SCAF1Q9H7N4 1312 aaKnown RBP15.29■□□□□ 0.04
MCM4-214ENST00000523853 DMRT2Q9Y5R5 561 aa15.24■□□□□ 0.03
MCM4-214ENST00000523853 CCDC88BA6NC98 1476 aa15.23■□□□□ 0.03
MCM4-214ENST00000523853 LAMC3Q9Y6N6 1575 aa15.2■□□□□ 0.02
MCM4-214ENST00000523853 CADPSQ9ULU8 1353 aa15.16■□□□□ 0.02
MCM4-214ENST00000523853 PRDM2Q13029 1718 aa15.14■□□□□ 0.01
MCM4-214ENST00000523853 NESP48681 1621 aa15.12■□□□□ 0.01
MCM4-214ENST00000523853 CFTRP13569 1480 aa15.12■□□□□ 0.01
MCM4-214ENST00000523853 PDS5BQ9NTI5 1447 aa15.09■□□□□ 0.01
MCM4-214ENST00000523853 PPP4R3CPQ6ZMV5 832 aa15.06■□□□□ 0
MCM4-214ENST00000523853 ERCC6Q03468 1493 aa15.06■□□□□ 0
MCM4-214ENST00000523853 KIF21AQ7Z4S6 1674 aa15.03■□□□□ -0
MCM4-214ENST00000523853 FANCD2Q9BXW9 1451 aa15□□□□□ -0.01
MCM4-214ENST00000523853 CEP164Q9UPV0 1460 aa14.98□□□□□ -0.01
MCM4-214ENST00000523853 MRC2Q9UBG0 1479 aa14.9□□□□□ -0.02
MCM4-214ENST00000523853 THOC2Q8NI27 1593 aaKnown RBP14.88□□□□□ -0.03
MCM4-214ENST00000523853 ABCC8Q09428 1581 aa14.87□□□□□ -0.03
MCM4-214ENST00000523853 WDR62O43379 1518 aa14.84□□□□□ -0.03
MCM4-214ENST00000523853 DNMBPQ6XZF7 1577 aa14.81□□□□□ -0.04
MCM4-214ENST00000523853 CUX2O14529 1486 aa14.81□□□□□ -0.04
MCM4-214ENST00000523853 URB2Q14146 1524 aaKnown RBP14.8□□□□□ -0.04
MCM4-214ENST00000523853 DCAF8L1A6NGE4 600 aa14.79□□□□□ -0.04
MCM4-214ENST00000523853 TOPBP1Q92547 1522 aa14.78□□□□□ -0.04
MCM4-214ENST00000523853 WRNQ14191 1432 aaPredicted RBP eCLIP14.76□□□□□ -0.05
MCM4-214ENST00000523853 CUX1P39880 1505 aa14.73□□□□□ -0.05
MCM4-214ENST00000523853 BIVM-ERCC5R4GMW8 1640 aa14.73□□□□□ -0.05
MCM4-214ENST00000523853 CNKSR2Q8WXI2 1034 aa14.72□□□□□ -0.05
MCM4-214ENST00000523853 TOP2BQ02880 1626 aa14.71□□□□□ -0.05
MCM4-214ENST00000523853 SYNJ1O43426 1573 aa14.68□□□□□ -0.06
MCM4-214ENST00000523853 FGD5Q6ZNL6 1462 aa14.67□□□□□ -0.06
MCM4-214ENST00000523853 POLA1P09884 1462 aaPredicted RBP14.66□□□□□ -0.06
MCM4-214ENST00000523853 IFT140Q96RY7 1462 aa14.66□□□□□ -0.06
MCM4-214ENST00000523853 HOXD11P31277 338 aaPredicted RBP14.66□□□□□ -0.06
MCM4-214ENST00000523853 TRIM41Q8WV44 630 aa14.63□□□□□ -0.07
MCM4-214ENST00000523853 SOGA1O94964 1423 aa14.63□□□□□ -0.07
MCM4-214ENST00000523853 TARBP1Q13395 1621 aaKnown RBP14.6□□□□□ -0.07
MCM4-214ENST00000523853 WDR97A6NE52 1622 aa14.58□□□□□ -0.08
MCM4-214ENST00000523853 RNF216Q9NWF9 866 aaPredicted RBP14.57□□□□□ -0.08
MCM4-214ENST00000523853 RAD54L2Q9Y4B4 1467 aa14.57□□□□□ -0.08
MCM4-214ENST00000523853 ABCA10Q8WWZ4 1543 aa14.54□□□□□ -0.08
MCM4-214ENST00000523853 EIF4G3O43432 1585 aaKnown RBP14.51□□□□□ -0.09
MCM4-214ENST00000523853 ZNF608Q9ULD9 1512 aaPredicted RBP14.51□□□□□ -0.09
MCM4-214ENST00000523853 TDRD9Q8NDG6 1382 aaKnown RBP14.48□□□□□ -0.09
MCM4-214ENST00000523853 ABCA5Q8WWZ7 1642 aa14.48□□□□□ -0.09
MCM4-214ENST00000523853 CACNB1Q02641 598 aaPredicted RBP14.47□□□□□ -0.09
MCM4-214ENST00000523853 PBRM1Q86U86 1689 aa14.46□□□□□ -0.09
MCM4-214ENST00000523853 AQRO60306 1485 aaKnown RBP eCLIP14.46□□□□□ -0.091e-7■■■■■ 29
MCM4-214ENST00000523853 GAPVD1Q14C86 1478 aa14.46□□□□□ -0.09
MCM4-214ENST00000523853 KIF27Q86VH2 1401 aa14.46□□□□□ -0.09
MCM4-214ENST00000523853 NCBP3Q53F19 620 aaKnown RBP14.45□□□□□ -0.1
MCM4-214ENST00000523853 FAM9AQ8IZU1 332 aaPredicted RBP14.44□□□□□ -0.1
MCM4-214ENST00000523853 GRIN2BQ13224 1484 aa14.44□□□□□ -0.1
MCM4-214ENST00000523853 ERICH3Q5RHP9 1530 aa14.41□□□□□ -0.1
MCM4-214ENST00000523853 MAGI1Q96QZ7 1491 aaPredicted RBP14.38□□□□□ -0.11
MCM4-214ENST00000523853 RUSC2Q8N2Y8 1516 aa14.37□□□□□ -0.11
MCM4-214ENST00000523853 EEA1Q15075 1411 aa14.36□□□□□ -0.11
MCM4-214ENST00000523853 SNAPC4Q5SXM2 1469 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 117.7 ms