RNA–Protein interactions for RNA: ENST00000229195.7

CNOT2-201, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT2, Length 3,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-201ENST00000229195 NISCHQ9Y2I1 1504 aa23.9■■□□□ 1.42
CNOT2-201ENST00000229195 CCDC180Q9P1Z9 1646 aa20.62■□□□□ 0.89
CNOT2-201ENST00000229195 DCAF8L2P0C7V8 631 aa20.2■□□□□ 0.82
CNOT2-201ENST00000229195 ZCCHC6Q5VYS8 1495 aaKnown RBP20.05■□□□□ 0.8
CNOT2-201ENST00000229195 SHROOM4Q9ULL8 1493 aa19.98■□□□□ 0.79
CNOT2-201ENST00000229195 ABCC9O60706 1549 aa19.88■□□□□ 0.77
CNOT2-201ENST00000229195 DCAF1Q9Y4B6 1507 aa19.54■□□□□ 0.72
CNOT2-201ENST00000229195 SCRIBQ14160 1630 aa19.31■□□□□ 0.68
CNOT2-201ENST00000229195 NACADO15069 1562 aa19.25■□□□□ 0.67
CNOT2-201ENST00000229195 MYO15BQ96JP2 1530 aa19.24■□□□□ 0.67
CNOT2-201ENST00000229195 SUPT5HO00267 1087 aaKnown RBP19.23■□□□□ 0.67
CNOT2-201ENST00000229195 RB1CC1Q8TDY2 1594 aa19.13■□□□□ 0.65
CNOT2-201ENST00000229195 PABPN1Q86U42 306 aaKnown RBP eCLIP18.89■□□□□ 0.61
CNOT2-201ENST00000229195 UNC13AQ9UPW8 1703 aa18.82■□□□□ 0.6
CNOT2-201ENST00000229195 CECR2Q9BXF3 1484 aa18.75■□□□□ 0.59
CNOT2-201ENST00000229195 RSF1Q96T23 1441 aaPredicted RBP18.65■□□□□ 0.58
CNOT2-201ENST00000229195 BICRAQ9NZM4 1560 aa18.64■□□□□ 0.57
CNOT2-201ENST00000229195 MROH2BQ7Z745 1585 aa18.58■□□□□ 0.56
CNOT2-201ENST00000229195 WIZO95785 1651 aa18.44■□□□□ 0.54
CNOT2-201ENST00000229195 BAZ1AQ9NRL2 1556 aaPredicted RBP18.41■□□□□ 0.54
CNOT2-201ENST00000229195 SMARCA4P51532 1647 aa18.36■□□□□ 0.53
CNOT2-201ENST00000229195 CHIC1Q5VXU3 224 aa18.26■□□□□ 0.51
CNOT2-201ENST00000229195 TOP2AP11388 1531 aaKnown RBP18.1■□□□□ 0.49
CNOT2-201ENST00000229195 ATAD2BQ9ULI0 1458 aa18.08■□□□□ 0.49
CNOT2-201ENST00000229195 EIF4G1Q04637 1599 aaKnown RBP18.08■□□□□ 0.48
CNOT2-201ENST00000229195 CCDC88BA6NC98 1476 aa18.04■□□□□ 0.48
CNOT2-201ENST00000229195 BAZ1BQ9UIG0 1483 aaKnown RBP18■□□□□ 0.47
CNOT2-201ENST00000229195 SMARCA2P51531 1590 aa17.99■□□□□ 0.47
CNOT2-201ENST00000229195 PEG3Q9GZU2 1588 aa17.98■□□□□ 0.47
CNOT2-201ENST00000229195 TRIM41Q8WV44 630 aa17.92■□□□□ 0.46
CNOT2-201ENST00000229195 CC2D2AQ9P2K1 1620 aa17.84■□□□□ 0.45
CNOT2-201ENST00000229195 NCAPD3P42695 1498 aa17.83■□□□□ 0.45
CNOT2-201ENST00000229195 FAM9AQ8IZU1 332 aaPredicted RBP17.83■□□□□ 0.44
CNOT2-201ENST00000229195 ABCC8Q09428 1581 aa17.79■□□□□ 0.44
CNOT2-201ENST00000229195 EHMT2Q96KQ7 1210 aa17.76■□□□□ 0.43
CNOT2-201ENST00000229195 LOC105371045A0A1W2PR82 267 aa17.75■□□□□ 0.43
CNOT2-201ENST00000229195 HMGXB3Q12766 1538 aa17.75■□□□□ 0.43
CNOT2-201ENST00000229195 DNAJC5BQ9UF47 199 aa17.72■□□□□ 0.43
CNOT2-201ENST00000229195 HRCP23327 699 aa17.67■□□□□ 0.42
CNOT2-201ENST00000229195 WRNQ14191 1432 aaPredicted RBP eCLIP17.55■□□□□ 0.4
CNOT2-201ENST00000229195 CFTRP13569 1480 aa17.49■□□□□ 0.39
CNOT2-201ENST00000229195 SYNJ1O43426 1573 aa17.49■□□□□ 0.39
CNOT2-201ENST00000229195 NESP48681 1621 aa17.47■□□□□ 0.39
CNOT2-201ENST00000229195 SOGA1O94964 1423 aa17.47■□□□□ 0.39
CNOT2-201ENST00000229195 CADPSQ9ULU8 1353 aa17.47■□□□□ 0.39
CNOT2-201ENST00000229195 RUSC2Q8N2Y8 1516 aa17.44■□□□□ 0.38
CNOT2-201ENST00000229195 CUX1P39880 1505 aa17.34■□□□□ 0.37
CNOT2-201ENST00000229195 FANCD2Q9BXW9 1451 aa17.31■□□□□ 0.36
CNOT2-201ENST00000229195 PCGF6Q9BYE7 350 aa17.29■□□□□ 0.36
CNOT2-201ENST00000229195 TOP2BQ02880 1626 aa17.29■□□□□ 0.36
CNOT2-201ENST00000229195 PPARGC1BQ86YN6 1023 aaKnown RBP17.28■□□□□ 0.36
CNOT2-201ENST00000229195 CSRNP3Q8WYN3 585 aa17.28■□□□□ 0.36
CNOT2-201ENST00000229195 PRDM2Q13029 1718 aa17.26■□□□□ 0.35
CNOT2-201ENST00000229195 BIVM-ERCC5R4GMW8 1640 aa17.23■□□□□ 0.35
CNOT2-201ENST00000229195 UBTFP17480 764 aaKnown RBP17.21■□□□□ 0.35
CNOT2-201ENST00000229195 LAMC3Q9Y6N6 1575 aa17.19■□□□□ 0.34
CNOT2-201ENST00000229195 CEP164Q9UPV0 1460 aa17.16■□□□□ 0.34
CNOT2-201ENST00000229195 RANGAP1P46060 587 aaPredicted RBP17.16■□□□□ 0.34
CNOT2-201ENST00000229195 FGD5Q6ZNL6 1462 aa17.16■□□□□ 0.34
CNOT2-201ENST00000229195 EEA1Q15075 1411 aa17.14■□□□□ 0.33
CNOT2-201ENST00000229195 PDS5BQ9NTI5 1447 aa17.13■□□□□ 0.33
CNOT2-201ENST00000229195 KIF21AQ7Z4S6 1674 aa17.12■□□□□ 0.33
CNOT2-201ENST00000229195 RAD54L2Q9Y4B4 1467 aa17.11■□□□□ 0.33
CNOT2-201ENST00000229195 TOPBP1Q92547 1522 aa17.1■□□□□ 0.33
CNOT2-201ENST00000229195 URB2Q14146 1524 aaKnown RBP17.1■□□□□ 0.33
CNOT2-201ENST00000229195 CUX2O14529 1486 aa17.1■□□□□ 0.33
CNOT2-201ENST00000229195 PELP1Q8IZL8 1130 aaKnown RBP17.08■□□□□ 0.32
CNOT2-201ENST00000229195 RAPGEF2Q9Y4G8 1499 aa17.07■□□□□ 0.32
CNOT2-201ENST00000229195 KIF27Q86VH2 1401 aa17.06■□□□□ 0.32
CNOT2-201ENST00000229195 DNMBPQ6XZF7 1577 aa17.06■□□□□ 0.32
CNOT2-201ENST00000229195 POLA1P09884 1462 aaPredicted RBP17.06■□□□□ 0.32
CNOT2-201ENST00000229195 GOLGA3Q08378 1498 aa17.05■□□□□ 0.32
CNOT2-201ENST00000229195 CEP162Q5TB80 1403 aa17.01■□□□□ 0.31
CNOT2-201ENST00000229195 TNIKQ9UKE5 1360 aa16.99■□□□□ 0.31
CNOT2-201ENST00000229195 TDRD9Q8NDG6 1382 aaKnown RBP16.98■□□□□ 0.31
CNOT2-201ENST00000229195 ERCC6Q03468 1493 aa16.97■□□□□ 0.31
CNOT2-201ENST00000229195 TTBK1Q5TCY1 1321 aaPredicted RBP16.97■□□□□ 0.31
CNOT2-201ENST00000229195 KIF21BO75037 1637 aa16.96■□□□□ 0.31
CNOT2-201ENST00000229195 IGF1RP08069 1367 aa16.96■□□□□ 0.3
CNOT2-201ENST00000229195 PRXQ9BXM0 1461 aa16.93■□□□□ 0.3
CNOT2-201ENST00000229195 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
CNOT2-201ENST00000229195 ABCA10Q8WWZ4 1543 aa16.89■□□□□ 0.29
CNOT2-201ENST00000229195 CARMIL1Q5VZK9 1371 aa16.88■□□□□ 0.29
CNOT2-201ENST00000229195 CLIP1P30622 1438 aa16.86■□□□□ 0.29
CNOT2-201ENST00000229195 AQRO60306 1485 aaKnown RBP eCLIP16.83■□□□□ 0.28
CNOT2-201ENST00000229195 ERICH3Q5RHP9 1530 aa16.82■□□□□ 0.28
CNOT2-201ENST00000229195 GAPVD1Q14C86 1478 aa16.81■□□□□ 0.28
CNOT2-201ENST00000229195 TARBP1Q13395 1621 aaKnown RBP16.79■□□□□ 0.28
CNOT2-201ENST00000229195 ZNF608Q9ULD9 1512 aaPredicted RBP16.79■□□□□ 0.28
CNOT2-201ENST00000229195 WDR97A6NE52 1622 aa16.79■□□□□ 0.28
CNOT2-201ENST00000229195 WDR62O43379 1518 aa16.77■□□□□ 0.27
CNOT2-201ENST00000229195 P3H3Q8IVL6 736 aa16.76■□□□□ 0.27
CNOT2-201ENST00000229195 TRIM26Q12899 539 aaPredicted RBP16.75■□□□□ 0.27
CNOT2-201ENST00000229195 ABCA5Q8WWZ7 1642 aa16.74■□□□□ 0.27
CNOT2-201ENST00000229195 THOC2Q8NI27 1593 aaKnown RBP16.74■□□□□ 0.27
CNOT2-201ENST00000229195 SCAF1Q9H7N4 1312 aaKnown RBP16.71■□□□□ 0.27
CNOT2-201ENST00000229195 IFT140Q96RY7 1462 aa16.68■□□□□ 0.26
CNOT2-201ENST00000229195 ARAP1Q96P48 1450 aa16.67■□□□□ 0.26
CNOT2-201ENST00000229195 VPS8Q8N3P4 1428 aa16.65■□□□□ 0.26
CNOT2-201ENST00000229195 ARHGAP35Q9NRY4 1499 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms