RNA–Protein interactions for RNA: ENST00000418359.7

CNOT2-202, Transcript of CCR4-NOT transcription complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT2, Length 3,152 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT2-202ENST00000418359 NISCHQ9Y2I1 1504 aa21.49■■□□□ 1.03
CNOT2-202ENST00000418359 SHROOM4Q9ULL8 1493 aa19.57■□□□□ 0.72
CNOT2-202ENST00000418359 HRCP23327 699 aa19.53■□□□□ 0.72
CNOT2-202ENST00000418359 SUPT5HO00267 1087 aaKnown RBP19.5■□□□□ 0.71
CNOT2-202ENST00000418359 PPARGC1BQ86YN6 1023 aaKnown RBP19.38■□□□□ 0.69
CNOT2-202ENST00000418359 PCGF6Q9BYE7 350 aa19.34■□□□□ 0.69
CNOT2-202ENST00000418359 MYO15BQ96JP2 1530 aa19.06■□□□□ 0.64
CNOT2-202ENST00000418359 CHIC1Q5VXU3 224 aa18.96■□□□□ 0.63
CNOT2-202ENST00000418359 LOC105371045A0A1W2PR82 267 aa18.71■□□□□ 0.59
CNOT2-202ENST00000418359 PELP1Q8IZL8 1130 aaKnown RBP18.69■□□□□ 0.58
CNOT2-202ENST00000418359 SCAF1Q9H7N4 1312 aaKnown RBP18.57■□□□□ 0.56
CNOT2-202ENST00000418359 DCAF8L2P0C7V8 631 aa18.52■□□□□ 0.56
CNOT2-202ENST00000418359 TRIM26Q12899 539 aaPredicted RBP18.5■□□□□ 0.55
CNOT2-202ENST00000418359 DCAF1Q9Y4B6 1507 aa18.45■□□□□ 0.54
CNOT2-202ENST00000418359 ZEB1P37275 1124 aaPredicted RBP18.26■□□□□ 0.51
CNOT2-202ENST00000418359 ZCCHC6Q5VYS8 1495 aaKnown RBP18.24■□□□□ 0.51
CNOT2-202ENST00000418359 EHMT2Q96KQ7 1210 aa18.24■□□□□ 0.51
CNOT2-202ENST00000418359 CCDC180Q9P1Z9 1646 aa18.2■□□□□ 0.5
CNOT2-202ENST00000418359 FAM9AQ8IZU1 332 aaPredicted RBP18.13■□□□□ 0.49
CNOT2-202ENST00000418359 NEUROD1Q13562 356 aa18.09■□□□□ 0.49
CNOT2-202ENST00000418359 ACIN1Q9UKV3 1341 aaKnown RBP18.05■□□□□ 0.48
CNOT2-202ENST00000418359 GTF3C3Q9Y5Q9 886 aa18.02■□□□□ 0.48
CNOT2-202ENST00000418359 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.93■□□□□ 0.46
CNOT2-202ENST00000418359 TRIM41Q8WV44 630 aa17.89■□□□□ 0.46
CNOT2-202ENST00000418359 MYT1Q01538 1121 aa17.88■□□□□ 0.45
CNOT2-202ENST00000418359 CCER1Q8TC90 406 aaPredicted RBP17.86■□□□□ 0.45
CNOT2-202ENST00000418359 CENPBP07199 599 aaPredicted RBP17.83■□□□□ 0.45
CNOT2-202ENST00000418359 DIEXFQ68CQ4 756 aaKnown RBP17.81■□□□□ 0.44
CNOT2-202ENST00000418359 TTBK1Q5TCY1 1321 aaPredicted RBP17.78■□□□□ 0.44
CNOT2-202ENST00000418359 YTHDC1Q96MU7 727 aaKnown RBP17.76■□□□□ 0.43
CNOT2-202ENST00000418359 RSF1Q96T23 1441 aaPredicted RBP17.41■□□□□ 0.38
CNOT2-202ENST00000418359 ZNF316A6NFI3 1004 aaPredicted RBP17.39■□□□□ 0.37
CNOT2-202ENST00000418359 MIER1Q8N108 512 aa17.38■□□□□ 0.37
CNOT2-202ENST00000418359 RB1CC1Q8TDY2 1594 aa17.37■□□□□ 0.37
CNOT2-202ENST00000418359 ABCC9O60706 1549 aa17.33■□□□□ 0.36
CNOT2-202ENST00000418359 SCRIBQ14160 1630 aa17.19■□□□□ 0.34
CNOT2-202ENST00000418359 HNRNPUL2Q1KMD3 747 aaKnown RBP17.18■□□□□ 0.34
CNOT2-202ENST00000418359 SUPT16HQ9Y5B9 1047 aaKnown RBP17.06■□□□□ 0.32
CNOT2-202ENST00000418359 UBTFP17480 764 aaKnown RBP17.06■□□□□ 0.32
CNOT2-202ENST00000418359 BCL11AQ9H165 835 aa17.03■□□□□ 0.32
CNOT2-202ENST00000418359 CEP162Q5TB80 1403 aa17.02■□□□□ 0.32
CNOT2-202ENST00000418359 ANP32EQ9BTT0 268 aa16.99■□□□□ 0.31
CNOT2-202ENST00000418359 TSHZ2Q9NRE2 1034 aa16.99■□□□□ 0.31
CNOT2-202ENST00000418359 CECR2Q9BXF3 1484 aa16.99■□□□□ 0.31
CNOT2-202ENST00000418359 BCANQ96GW7 911 aa16.97■□□□□ 0.31
CNOT2-202ENST00000418359 WRNQ14191 1432 aaPredicted RBP eCLIP16.92■□□□□ 0.3
CNOT2-202ENST00000418359 CSRNP3Q8WYN3 585 aa16.92■□□□□ 0.3
CNOT2-202ENST00000418359 RANGAP1P46060 587 aaPredicted RBP16.91■□□□□ 0.3
CNOT2-202ENST00000418359 MROH2BQ7Z745 1585 aa16.9■□□□□ 0.3
CNOT2-202ENST00000418359 CCDC88BA6NC98 1476 aa16.87■□□□□ 0.29
CNOT2-202ENST00000418359 SOGA1O94964 1423 aa16.87■□□□□ 0.29
CNOT2-202ENST00000418359 ABCC8Q09428 1581 aa16.86■□□□□ 0.29
CNOT2-202ENST00000418359 WIZO95785 1651 aa16.84■□□□□ 0.29
CNOT2-202ENST00000418359 TNIKQ9UKE5 1360 aa16.81■□□□□ 0.28
CNOT2-202ENST00000418359 KCNH8Q96L42 1107 aa16.78■□□□□ 0.28
CNOT2-202ENST00000418359 RUSC2Q8N2Y8 1516 aa16.77■□□□□ 0.28
CNOT2-202ENST00000418359 APLP2Q06481 763 aa16.76■□□□□ 0.27
CNOT2-202ENST00000418359 CLSPNQ9HAW4 1339 aa16.74■□□□□ 0.27
CNOT2-202ENST00000418359 FKBP8Q14318 412 aa16.72■□□□□ 0.27
CNOT2-202ENST00000418359 ITGAEP38570 1179 aa16.67■□□□□ 0.26
CNOT2-202ENST00000418359 RBM19Q9Y4C8 960 aaKnown RBP16.61■□□□□ 0.25
CNOT2-202ENST00000418359 EIF4G1Q04637 1599 aaKnown RBP16.61■□□□□ 0.25
CNOT2-202ENST00000418359 GOLGA3Q08378 1498 aa16.6■□□□□ 0.25
CNOT2-202ENST00000418359 CLIP1P30622 1438 aa16.57■□□□□ 0.24
CNOT2-202ENST00000418359 BAZ1AQ9NRL2 1556 aaPredicted RBP16.56■□□□□ 0.24
CNOT2-202ENST00000418359 DHX57Q6P158 1386 aaKnown RBP16.56■□□□□ 0.24
CNOT2-202ENST00000418359 NEFLP07196 543 aa16.54■□□□□ 0.24
CNOT2-202ENST00000418359 TRIM52Q96A61 297 aa16.52■□□□□ 0.24
CNOT2-202ENST00000418359 DDX10Q13206 875 aaKnown RBP16.51■□□□□ 0.23
CNOT2-202ENST00000418359 EEA1Q15075 1411 aa16.49■□□□□ 0.23
CNOT2-202ENST00000418359 VPS8Q8N3P4 1428 aa16.47■□□□□ 0.23
CNOT2-202ENST00000418359 MSH5O43196 834 aa16.46■□□□□ 0.23
CNOT2-202ENST00000418359 HIRIP3Q9BW71 556 aaPredicted RBP16.46■□□□□ 0.23
CNOT2-202ENST00000418359 ERICH6Q7L0X2 663 aa16.44■□□□□ 0.22
CNOT2-202ENST00000418359 NACADO15069 1562 aa16.43■□□□□ 0.22
CNOT2-202ENST00000418359 KANK4Q5T7N3 995 aaPredicted RBP16.42■□□□□ 0.22
CNOT2-202ENST00000418359 IRX6P78412 446 aaPredicted RBP16.41■□□□□ 0.22
CNOT2-202ENST00000418359 CEP164Q9UPV0 1460 aa16.4■□□□□ 0.22
CNOT2-202ENST00000418359 TOP2AP11388 1531 aaKnown RBP16.38■□□□□ 0.21
CNOT2-202ENST00000418359 SMARCA2P51531 1590 aa16.38■□□□□ 0.21
CNOT2-202ENST00000418359 RAPGEF2Q9Y4G8 1499 aa16.35■□□□□ 0.21
CNOT2-202ENST00000418359 SIN3AQ96ST3 1273 aa16.31■□□□□ 0.2
CNOT2-202ENST00000418359 KIF21BO75037 1637 aa16.29■□□□□ 0.2
CNOT2-202ENST00000418359 ANP32CO43423 234 aa16.26■□□□□ 0.19
CNOT2-202ENST00000418359 PRKCSHP14314 528 aaPredicted RBP16.26■□□□□ 0.19
CNOT2-202ENST00000418359 CDK11AQ9UQ88 783 aaPredicted RBP16.26■□□□□ 0.19
CNOT2-202ENST00000418359 SYNJ1O43426 1573 aa16.21■□□□□ 0.19
CNOT2-202ENST00000418359 SMARCA4P51532 1647 aa16.2■□□□□ 0.18
CNOT2-202ENST00000418359 DEKP35659 375 aaKnown RBP16.2■□□□□ 0.18
CNOT2-202ENST00000418359 RAB3GAP2Q9H2M9 1393 aa16.2■□□□□ 0.18
CNOT2-202ENST00000418359 PPP1R15AO75807 674 aaPredicted RBP16.19■□□□□ 0.18
CNOT2-202ENST00000418359 HNRNPUQ00839 825 aaKnown RBP eCLIP16.19■□□□□ 0.18
CNOT2-202ENST00000418359 NBR1Q14596 966 aa16.18■□□□□ 0.18
CNOT2-202ENST00000418359 CCNB3Q8WWL7 1395 aa16.18■□□□□ 0.18
CNOT2-202ENST00000418359 FANCIQ9NVI1 1328 aa16.16■□□□□ 0.18
CNOT2-202ENST00000418359 WDR97A6NE52 1622 aa16.15■□□□□ 0.18
CNOT2-202ENST00000418359 BAZ1BQ9UIG0 1483 aaKnown RBP16.14■□□□□ 0.18
CNOT2-202ENST00000418359 FAM50AQ14320 339 aaKnown RBP16.14■□□□□ 0.17
CNOT2-202ENST00000418359 PABPN1Q86U42 306 aaKnown RBP eCLIP16.14■□□□□ 0.17
CNOT2-202ENST00000418359 ARAP1Q96P48 1450 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 144 ms