Protein–RNA interactions for Protein: Q00839

HNRNPU, Heterogeneous nuclear ribonucleoprotein U, humanhuman

Known RBP eCLIP

Length 825 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPUQ00839 SETD5-217ENST00000466242 4038 ntTSL 28.87□□□□□ -0.993e-6■□□□□ 11.1
HNRNPUQ00839 CABIN1-208ENST00000467937 593 ntTSL 323.86■■□□□ 1.411e-14■□□□□ 11.1
HNRNPUQ00839 CABIN1-201ENST00000263119 7222 ntAPPRIS P3 TSL 1 (best) BASIC15.76■□□□□ 0.111e-14■□□□□ 11.1
HNRNPUQ00839 CABIN1-203ENST00000398319 7480 ntAPPRIS P3 TSL 1 (best) BASIC15.49■□□□□ 0.071e-14■□□□□ 11.1
HNRNPUQ00839 CABIN1-204ENST00000405822 6952 ntAPPRIS ALT2 TSL 1 (best) BASIC15.31■□□□□ 0.041e-14■□□□□ 11.1
HNRNPUQ00839 CABIN1-214ENST00000617531 7072 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.071e-14■□□□□ 11.1
HNRNPUQ00839 PRKCB-202ENST00000321728 2689 ntAPPRIS ALT1 TSL 1 (best) BASIC24.94■■□□□ 1.589e-7■□□□□ 11
HNRNPUQ00839 PRKCB-209ENST00000498058 480 ntTSL 3 BASIC22.88■■□□□ 1.259e-7■□□□□ 11
HNRNPUQ00839 PRKCB-210ENST00000498739 569 ntTSL 421.62■■□□□ 1.059e-7■□□□□ 11
HNRNPUQ00839 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC19.01■□□□□ 0.639e-7■□□□□ 11
HNRNPUQ00839 CYP11B1-203ENST00000377675 2280 ntTSL 1 (best) BASIC18.29■□□□□ 0.527e-14■□□□□ 11
HNRNPUQ00839 CYP11B1-204ENST00000517471 1874 ntTSL 1 (best) BASIC18.12■□□□□ 0.497e-14■□□□□ 11
HNRNPUQ00839 CYP11B1-201ENST00000292427 2664 ntAPPRIS P1 TSL 1 (best) BASIC15.27■□□□□ 0.047e-14■□□□□ 11
HNRNPUQ00839 CYP11B1-202ENST00000314111 3726 ntTSL 512.61□□□□□ -0.397e-14■□□□□ 11
HNRNPUQ00839 SCARB1-201ENST00000261693 2611 ntAPPRIS P1 TSL 1 (best) BASIC27.02■■□□□ 1.922e-6■□□□□ 11
HNRNPUQ00839 SCARB1-211ENST00000546215 1597 ntTSL 1 (best) BASIC26.99■■□□□ 1.912e-6■□□□□ 11
HNRNPUQ00839 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC25.08■■□□□ 1.612e-6■□□□□ 11
HNRNPUQ00839 SCARB1-202ENST00000339570 3329 ntTSL 5 BASIC22.71■■□□□ 1.232e-6■□□□□ 11
HNRNPUQ00839 SCARB1-205ENST00000538291 5527 ntTSL 522.65■■□□□ 1.222e-6■□□□□ 11
HNRNPUQ00839 FDFT1-203ENST00000446331 1558 ntTSL 231.94■■■□□ 2.78e-7■□□□□ 11
HNRNPUQ00839 FDFT1-201ENST00000220584 2176 ntAPPRIS P1 TSL 1 (best) BASIC29.79■■■□□ 2.368e-7■□□□□ 11
HNRNPUQ00839 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC26.59■■□□□ 1.858e-7■□□□□ 11
HNRNPUQ00839 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC25.73■■□□□ 1.718e-7■□□□□ 11
HNRNPUQ00839 FDFT1-207ENST00000525607 1773 ntTSL 224.8■■□□□ 1.568e-7■□□□□ 11
HNRNPUQ00839 FDFT1-217ENST00000530337 741 ntTSL 321.46■■□□□ 1.038e-7■□□□□ 11
HNRNPUQ00839 FDFT1-224ENST00000618539 2660 ntAPPRIS P1 TSL 5 BASIC21.45■■□□□ 1.028e-7■□□□□ 11
HNRNPUQ00839 FDFT1-202ENST00000443614 1393 ntTSL 2 BASIC19.38■□□□□ 0.698e-7■□□□□ 11
HNRNPUQ00839 FDFT1-223ENST00000615631 2462 ntAPPRIS P1 TSL 5 BASIC18.78■□□□□ 0.68e-7■□□□□ 11
HNRNPUQ00839 FDFT1-214ENST00000528812 2013 ntTSL 2 BASIC17.62■□□□□ 0.418e-7■□□□□ 11
HNRNPUQ00839 FDFT1-215ENST00000529464 932 ntTSL 1 (best)17.55■□□□□ 0.48e-7■□□□□ 11
HNRNPUQ00839 FDFT1-218ENST00000530664 1761 ntTSL 2 BASIC16■□□□□ 0.158e-7■□□□□ 11
HNRNPUQ00839 FDFT1-204ENST00000525283 898 ntTSL 315.34■□□□□ 0.058e-7■□□□□ 11
HNRNPUQ00839 FDFT1-225ENST00000622850 1987 ntTSL 2 BASIC14.28□□□□□ -0.128e-7■□□□□ 11
HNRNPUQ00839 FDFT1-222ENST00000538689 2289 ntTSL 2 BASIC9.55□□□□□ -0.888e-7■□□□□ 11
HNRNPUQ00839 STRBP-202ENST00000360998 2990 ntTSL 1 (best) BASIC31.04■■■□□ 2.562e-12■□□□□ 11
HNRNPUQ00839 STRBP-203ENST00000407982 2751 ntTSL 1 (best)29.83■■■□□ 2.372e-12■□□□□ 11
HNRNPUQ00839 MSH6-202ENST00000411819 548 ntTSL 427.74■■■□□ 2.031e-6■□□□□ 11
HNRNPUQ00839 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC26.88■■□□□ 1.892e-12■□□□□ 11
HNRNPUQ00839 MSH6-206ENST00000455383 578 ntTSL 522.57■■□□□ 1.21e-6■□□□□ 11
HNRNPUQ00839 MSH6-207ENST00000456246 846 ntTSL 322.36■■□□□ 1.171e-6■□□□□ 11
HNRNPUQ00839 MSH6-203ENST00000420813 491 ntTSL 421.39■■□□□ 1.011e-6■□□□□ 11
HNRNPUQ00839 MSH6-214ENST00000616033 3429 ntTSL 5 BASIC18.51■□□□□ 0.551e-6■□□□□ 11
HNRNPUQ00839 MSH6-210ENST00000540021 3930 ntTSL 2 BASIC18.17■□□□□ 0.51e-6■□□□□ 11
HNRNPUQ00839 MSH6-215ENST00000622629 4324 ntTSL 5 BASIC17.84■□□□□ 0.451e-6■□□□□ 11
HNRNPUQ00839 MSH6-208ENST00000493177 813 ntTSL 317.66■□□□□ 0.421e-6■□□□□ 11
HNRNPUQ00839 MSH6-213ENST00000614496 4150 ntTSL 1 (best) BASIC17.55■□□□□ 0.41e-6■□□□□ 11
HNRNPUQ00839 MSH6-204ENST00000445503 4158 ntTSL 1 (best)16.63■□□□□ 0.251e-6■□□□□ 11
HNRNPUQ00839 MSH6-201ENST00000234420 7476 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.051e-6■□□□□ 11
HNRNPUQ00839 MSH6-211ENST00000606499 833 ntTSL 310.12□□□□□ -0.791e-6■□□□□ 11
HNRNPUQ00839 MSH6-209ENST00000538136 4055 ntTSL 2 BASIC9.72□□□□□ -0.851e-6■□□□□ 11
HNRNPUQ00839 SLC22A23-201ENST00000380298 1574 ntTSL 1 (best) BASIC35.98■■■■□ 3.356e-6■□□□□ 10.9
HNRNPUQ00839 CTDSPL-206ENST00000443503 4640 ntAPPRIS ALT1 TSL 1 (best) BASIC30.81■■■□□ 2.526e-6■□□□□ 10.9
HNRNPUQ00839 RARRES2-204ENST00000478771 1907 ntTSL 229.57■■■□□ 2.326e-6■□□□□ 10.9
HNRNPUQ00839 STK35-202ENST00000493263 1595 ntTSL 1 (best)27.84■■■□□ 2.056e-6■□□□□ 10.9
HNRNPUQ00839 RARRES2-202ENST00000466675 1618 ntAPPRIS P1 TSL 2 BASIC27.64■■■□□ 2.026e-6■□□□□ 10.9
HNRNPUQ00839 RARRES2-201ENST00000223271 740 ntAPPRIS P1 TSL 1 (best) BASIC27.3■■□□□ 1.966e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC26.84■■□□□ 1.896e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC24.94■■□□□ 1.586e-6■□□□□ 10.9
HNRNPUQ00839 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.316e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-210ENST00000490273 2043 ntTSL 1 (best) BASIC22.06■■□□□ 1.126e-6■□□□□ 10.9
HNRNPUQ00839 STK35-201ENST00000381482 6685 ntAPPRIS P1 TSL 5 BASIC21.84■■□□□ 1.096e-6■□□□□ 10.9
HNRNPUQ00839 CTDSPL-204ENST00000435525 371 ntTSL 321.59■■□□□ 1.056e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-212ENST00000497691 2555 ntTSL 1 (best)21.05■□□□□ 0.966e-6■□□□□ 10.9
HNRNPUQ00839 GREB1-205ENST00000389825 1315 ntTSL 1 (best) BASIC20.77■□□□□ 0.912e-8■□□□□ 10.9
HNRNPUQ00839 RARRES2-203ENST00000467793 583 ntTSL 319.71■□□□□ 0.756e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-202ENST00000380302 2883 ntTSL 1 (best) BASIC18.64■□□□□ 0.576e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-209ENST00000485307 1574 ntTSL 1 (best)18.16■□□□□ 0.56e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-207ENST00000467177 1221 ntTSL 1 (best)17.81■□□□□ 0.446e-6■□□□□ 10.9
HNRNPUQ00839 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC17.47■□□□□ 0.396e-6■□□□□ 10.9
HNRNPUQ00839 AL136295.1-201ENST00000530611 2740 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.012e-8■□□□□ 10.9
HNRNPUQ00839 ZFHX4-AS1-204ENST00000522961 240 ntTSL 515.09■□□□□ 0.016e-6■□□□□ 10.9
HNRNPUQ00839 SLC22A23-211ENST00000496753 561 ntTSL 414.64□□□□□ -0.076e-6■□□□□ 10.9
HNRNPUQ00839 GREB1-202ENST00000263834 2448 ntTSL 1 (best) BASIC14.06□□□□□ -0.162e-8■□□□□ 10.9
HNRNPUQ00839 GREB1-208ENST00000470980 833 ntTSL 312.52□□□□□ -0.412e-8■□□□□ 10.9
HNRNPUQ00839 CTDSPL-201ENST00000273179 4459 ntAPPRIS P4 TSL 1 (best) BASIC10.56□□□□□ -0.726e-6■□□□□ 10.9
HNRNPUQ00839 GREB1-210ENST00000628795 438 ntTSL 56.49□□□□□ -1.372e-8■□□□□ 10.9
HNRNPUQ00839 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC34.27■■■■□ 3.088e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC33.25■■■□□ 2.918e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC33.21■■■□□ 2.918e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-209ENST00000425836 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC31.8■■■□□ 2.688e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-208ENST00000417285 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC31.56■■■□□ 2.648e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-220ENST00000519767 970 ntTSL 1 (best)31.4■■■□□ 2.628e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC28.41■■■□□ 2.148e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-206ENST00000372077 2834 ntTSL 1 (best) BASIC24.85■■□□□ 1.578e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-205ENST00000372067 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC23.58■■□□□ 1.368e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-222ENST00000520948 1199 ntTSL 1 (best) BASIC23.49■■□□□ 1.358e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-221ENST00000520265 336 ntTSL 518.01■□□□□ 0.478e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-215ENST00000497139 2746 ntTSL 1 (best)17.87■□□□□ 0.458e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-201ENST00000230480 993 ntTSL 1 (best) BASIC17.59■□□□□ 0.418e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-219ENST00000518824 606 ntTSL 1 (best) BASIC16.95■□□□□ 0.38e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC16.61■□□□□ 0.258e-7■□□□□ 10.9
HNRNPUQ00839 VEGFA-225ENST00000523950 954 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.178e-7■□□□□ 10.9
Retrieved 100 of 2,288 protein–RNA pairs in 105.9 ms