RNA–Protein interactions for RNA: ENST00000446331.6

FDFT1-203, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2

Gene FDFT1, Length 1,558 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-203ENST00000446331 NISCHQ9Y2I1 1504 aa53.73■■■■■ 6.19
FDFT1-203ENST00000446331 CCDC180Q9P1Z9 1646 aa46.94■■■■■ 5.1
FDFT1-203ENST00000446331 ZCCHC6Q5VYS8 1495 aaKnown RBP45.16■■■■■ 4.82
FDFT1-203ENST00000446331 DCAF1Q9Y4B6 1507 aa44.57■■■■■ 4.73
FDFT1-203ENST00000446331 ABCC9O60706 1549 aa44.21■■■■■ 4.67
FDFT1-203ENST00000446331 DCAF8L2P0C7V8 631 aa44.08■■■■■ 4.65
FDFT1-203ENST00000446331 MYO15BQ96JP2 1530 aa44.07■■■■■ 4.65
FDFT1-203ENST00000446331 NACADO15069 1562 aa43.7■■■■■ 4.59
FDFT1-203ENST00000446331 SHROOM4Q9ULL8 1493 aa43.57■■■■■ 4.57
FDFT1-203ENST00000446331 RB1CC1Q8TDY2 1594 aa43.28■■■■■ 4.52
FDFT1-203ENST00000446331 SCRIBQ14160 1630 aa42.98■■■■■ 4.47
FDFT1-203ENST00000446331 UNC13AQ9UPW8 1703 aa42.31■■■■■ 4.36
FDFT1-203ENST00000446331 SUPT5HO00267 1087 aaKnown RBP41.95■■■■■ 4.31
FDFT1-203ENST00000446331 BICRAQ9NZM4 1560 aa41.91■■■■■ 4.3
FDFT1-203ENST00000446331 RSF1Q96T23 1441 aaPredicted RBP41.65■■■■■ 4.26
FDFT1-203ENST00000446331 CECR2Q9BXF3 1484 aa41.63■■■■■ 4.25
FDFT1-203ENST00000446331 PABPN1Q86U42 306 aaKnown RBP eCLIP41.55■■■■■ 4.24
FDFT1-203ENST00000446331 BAZ1AQ9NRL2 1556 aaPredicted RBP41.52■■■■■ 4.24
FDFT1-203ENST00000446331 MROH2BQ7Z745 1585 aa41.44■■■■■ 4.22
FDFT1-203ENST00000446331 SMARCA4P51532 1647 aa41.29■■■■■ 4.2
FDFT1-203ENST00000446331 WIZO95785 1651 aa41.07■■■■■ 4.17
FDFT1-203ENST00000446331 PEG3Q9GZU2 1588 aa40.88■■■■■ 4.13
FDFT1-203ENST00000446331 TOP2AP11388 1531 aaKnown RBP40.76■■■■■ 4.12
FDFT1-203ENST00000446331 EIF4G1Q04637 1599 aaKnown RBP40.66■■■■■ 4.1
FDFT1-203ENST00000446331 SMARCA2P51531 1590 aa40.64■■■■■ 4.1
FDFT1-203ENST00000446331 ATAD2BQ9ULI0 1458 aa40.6■■■■■ 4.09
FDFT1-203ENST00000446331 BAZ1BQ9UIG0 1483 aaKnown RBP40.36■■■■■ 4.05
FDFT1-203ENST00000446331 DNAJC5BQ9UF47 199 aa40.31■■■■■ 4.04
FDFT1-203ENST00000446331 NCAPD3P42695 1498 aa40.3■■■■■ 4.04
FDFT1-203ENST00000446331 HMGXB3Q12766 1538 aa40.28■■■■■ 4.04
FDFT1-203ENST00000446331 CHIC1Q5VXU3 224 aa40.28■■■■■ 4.04
FDFT1-203ENST00000446331 CCDC88BA6NC98 1476 aa40.28■■■■■ 4.04
FDFT1-203ENST00000446331 CC2D2AQ9P2K1 1620 aa40.02■■■■■ 4
FDFT1-203ENST00000446331 TRIM41Q8WV44 630 aa39.55■■■■□ 3.92
FDFT1-203ENST00000446331 CFTRP13569 1480 aa39.4■■■■□ 3.9
FDFT1-203ENST00000446331 ABCC8Q09428 1581 aa39.35■■■■□ 3.89
FDFT1-203ENST00000446331 CADPSQ9ULU8 1353 aa39.23■■■■□ 3.87
FDFT1-203ENST00000446331 PRDM2Q13029 1718 aa39.22■■■■□ 3.87
FDFT1-203ENST00000446331 WRNQ14191 1432 aaPredicted RBP eCLIP39.21■■■■□ 3.87
FDFT1-203ENST00000446331 SYNJ1O43426 1573 aa39.01■■■■□ 3.84
FDFT1-203ENST00000446331 LAMC3Q9Y6N6 1575 aa38.93■■■■□ 3.82
FDFT1-203ENST00000446331 TOP2BQ02880 1626 aa38.93■■■■□ 3.82
FDFT1-203ENST00000446331 BIVM-ERCC5R4GMW8 1640 aa38.9■■■■□ 3.82
FDFT1-203ENST00000446331 EEA1Q15075 1411 aa38.78■■■■□ 3.8
FDFT1-203ENST00000446331 CUX1P39880 1505 aa38.77■■■■□ 3.8
FDFT1-203ENST00000446331 FANCD2Q9BXW9 1451 aa38.77■■■■□ 3.8
FDFT1-203ENST00000446331 NESP48681 1621 aa38.75■■■■□ 3.79
FDFT1-203ENST00000446331 FAM9AQ8IZU1 332 aaPredicted RBP38.67■■■■□ 3.78
FDFT1-203ENST00000446331 SOGA1O94964 1423 aa38.63■■■■□ 3.78
FDFT1-203ENST00000446331 LOC105371045A0A1W2PR82 267 aa38.61■■■■□ 3.77
FDFT1-203ENST00000446331 PDS5BQ9NTI5 1447 aa38.61■■■■□ 3.77
FDFT1-203ENST00000446331 CEP164Q9UPV0 1460 aa38.54■■■■□ 3.76
FDFT1-203ENST00000446331 DNMBPQ6XZF7 1577 aa38.48■■■■□ 3.75
FDFT1-203ENST00000446331 RUSC2Q8N2Y8 1516 aa38.45■■■■□ 3.75
FDFT1-203ENST00000446331 CSRNP3Q8WYN3 585 aa38.4■■■■□ 3.74
FDFT1-203ENST00000446331 TOPBP1Q92547 1522 aa38.36■■■■□ 3.73
FDFT1-203ENST00000446331 KIF21AQ7Z4S6 1674 aa38.33■■■■□ 3.73
FDFT1-203ENST00000446331 FGD5Q6ZNL6 1462 aa38.33■■■■□ 3.73
FDFT1-203ENST00000446331 URB2Q14146 1524 aaKnown RBP38.27■■■■□ 3.72
FDFT1-203ENST00000446331 KIF27Q86VH2 1401 aa38.25■■■■□ 3.71
FDFT1-203ENST00000446331 KIF21BO75037 1637 aa38.22■■■■□ 3.71
FDFT1-203ENST00000446331 POLA1P09884 1462 aaPredicted RBP38.16■■■■□ 3.7
FDFT1-203ENST00000446331 GOLGA3Q08378 1498 aa38.16■■■■□ 3.7
FDFT1-203ENST00000446331 ERCC6Q03468 1493 aa38.1■■■■□ 3.69
FDFT1-203ENST00000446331 MRC2Q9UBG0 1479 aa38.1■■■■□ 3.69
FDFT1-203ENST00000446331 CUX2O14529 1486 aa38.08■■■■□ 3.69
FDFT1-203ENST00000446331 ABCA10Q8WWZ4 1543 aa38.08■■■■□ 3.69
FDFT1-203ENST00000446331 TNIKQ9UKE5 1360 aa38.04■■■■□ 3.68
FDFT1-203ENST00000446331 PRXQ9BXM0 1461 aa38■■■■□ 3.67
FDFT1-203ENST00000446331 EHMT2Q96KQ7 1210 aa38■■■■□ 3.67
FDFT1-203ENST00000446331 ERICH3Q5RHP9 1530 aa37.99■■■■□ 3.67
FDFT1-203ENST00000446331 RAD54L2Q9Y4B4 1467 aa37.96■■■■□ 3.67
FDFT1-203ENST00000446331 WDR97A6NE52 1622 aa37.94■■■■□ 3.66
FDFT1-203ENST00000446331 WDR62O43379 1518 aa37.92■■■■□ 3.66
FDFT1-203ENST00000446331 RAPGEF2Q9Y4G8 1499 aa37.88■■■■□ 3.66
FDFT1-203ENST00000446331 IGF1RP08069 1367 aa37.86■■■■□ 3.65
FDFT1-203ENST00000446331 UBTFP17480 764 aaKnown RBP37.84■■■■□ 3.65
FDFT1-203ENST00000446331 TARBP1Q13395 1621 aaKnown RBP37.81■■■■□ 3.64
FDFT1-203ENST00000446331 CEP162Q5TB80 1403 aa37.78■■■■□ 3.64
FDFT1-203ENST00000446331 THOC2Q8NI27 1593 aaKnown RBP37.77■■■■□ 3.64
FDFT1-203ENST00000446331 ABCA5Q8WWZ7 1642 aa37.75■■■■□ 3.63
FDFT1-203ENST00000446331 CARMIL1Q5VZK9 1371 aa37.68■■■■□ 3.62
FDFT1-203ENST00000446331 CUL7Q14999 1698 aa37.66■■■■□ 3.62
FDFT1-203ENST00000446331 IFT140Q96RY7 1462 aa37.66■■■■□ 3.62
FDFT1-203ENST00000446331 GAPVD1Q14C86 1478 aa37.63■■■■□ 3.61
FDFT1-203ENST00000446331 TDRD9Q8NDG6 1382 aaKnown RBP37.58■■■■□ 3.61
FDFT1-203ENST00000446331 CLIP1P30622 1438 aa37.5■■■■□ 3.59
FDFT1-203ENST00000446331 PBRM1Q86U86 1689 aa37.42■■■■□ 3.58
FDFT1-203ENST00000446331 GRIN2BQ13224 1484 aa37.37■■■■□ 3.57
FDFT1-203ENST00000446331 AQRO60306 1485 aaKnown RBP eCLIP37.35■■■■□ 3.573e-7■■■■□ 23
FDFT1-203ENST00000446331 ZNF608Q9ULD9 1512 aaPredicted RBP37.33■■■■□ 3.57
FDFT1-203ENST00000446331 FHAD1B1AJZ9 1412 aa37.27■■■■□ 3.56
FDFT1-203ENST00000446331 EIF4G3O43432 1585 aaKnown RBP37.26■■■■□ 3.56
FDFT1-203ENST00000446331 ADAMTS12P58397 1594 aa37.25■■■■□ 3.55
FDFT1-203ENST00000446331 VPS8Q8N3P4 1428 aa37.21■■■■□ 3.55
FDFT1-203ENST00000446331 CTTNBP2Q8WZ74 1663 aa37.19■■■■□ 3.54
FDFT1-203ENST00000446331 ARAP1Q96P48 1450 aa37.13■■■■□ 3.53
FDFT1-203ENST00000446331 ARHGAP35Q9NRY4 1499 aa37.12■■■■□ 3.53
FDFT1-203ENST00000446331 MAGI1Q96QZ7 1491 aaPredicted RBP37.09■■■■□ 3.53
FDFT1-203ENST00000446331 SNAPC4Q5SXM2 1469 aa37.06■■■■□ 3.52
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms