RNA–Protein interactions for RNA: ENST00000530337.5

FDFT1-217, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 3

Gene FDFT1, Length 741 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-217ENST00000530337 NISCHQ9Y2I1 1504 aa44.57■■■■■ 4.73
FDFT1-217ENST00000530337 ABCC9O60706 1549 aa40.31■■■■■ 4.04
FDFT1-217ENST00000530337 CCDC180Q9P1Z9 1646 aa39.99■■■■□ 3.99
FDFT1-217ENST00000530337 RB1CC1Q8TDY2 1594 aa38.23■■■■□ 3.71
FDFT1-217ENST00000530337 DNAJC5BQ9UF47 199 aa38.01■■■■□ 3.68
FDFT1-217ENST00000530337 NACADO15069 1562 aa37.92■■■■□ 3.66
FDFT1-217ENST00000530337 DCAF8L2P0C7V8 631 aa37.83■■■■□ 3.65
FDFT1-217ENST00000530337 PABPN1Q86U42 306 aaKnown RBP eCLIP37.55■■■■□ 3.6
FDFT1-217ENST00000530337 MYO15BQ96JP2 1530 aa37.33■■■■□ 3.57
FDFT1-217ENST00000530337 UNC13AQ9UPW8 1703 aa37.25■■■■□ 3.55
FDFT1-217ENST00000530337 BICRAQ9NZM4 1560 aa37.1■■■■□ 3.53
FDFT1-217ENST00000530337 ZCCHC6Q5VYS8 1495 aaKnown RBP36.88■■■■□ 3.5
FDFT1-217ENST00000530337 DCAF1Q9Y4B6 1507 aa36.78■■■■□ 3.48
FDFT1-217ENST00000530337 SHROOM4Q9ULL8 1493 aa36.59■■■■□ 3.45
FDFT1-217ENST00000530337 SCRIBQ14160 1630 aa36.5■■■■□ 3.43
FDFT1-217ENST00000530337 CC2D2AQ9P2K1 1620 aa36.34■■■■□ 3.41
FDFT1-217ENST00000530337 CECR2Q9BXF3 1484 aa36.32■■■■□ 3.41
FDFT1-217ENST00000530337 EIF4G1Q04637 1599 aaKnown RBP36.23■■■■□ 3.39
FDFT1-217ENST00000530337 NCAPD3P42695 1498 aa35.05■■■■□ 3.2
FDFT1-217ENST00000530337 DNAJC5Q9H3Z4 198 aa35.05■■■■□ 3.2
FDFT1-217ENST00000530337 ATAD2BQ9ULI0 1458 aa34.91■■■■□ 3.18
FDFT1-217ENST00000530337 ERCC6Q03468 1493 aa34.82■■■■□ 3.16
FDFT1-217ENST00000530337 CUX2O14529 1486 aa34.79■■■■□ 3.16
FDFT1-217ENST00000530337 SMARCA4P51532 1647 aa34.78■■■■□ 3.16
FDFT1-217ENST00000530337 SMARCA2P51531 1590 aa34.78■■■■□ 3.16
FDFT1-217ENST00000530337 HMGXB3Q12766 1538 aa34.72■■■■□ 3.15
FDFT1-217ENST00000530337 BAZ1AQ9NRL2 1556 aaPredicted RBP34.61■■■■□ 3.13
FDFT1-217ENST00000530337 BAZ1BQ9UIG0 1483 aaKnown RBP34.57■■■■□ 3.12
FDFT1-217ENST00000530337 NESP48681 1621 aa34.55■■■■□ 3.12
FDFT1-217ENST00000530337 PEG3Q9GZU2 1588 aa34.43■■■■□ 3.1
FDFT1-217ENST00000530337 MROH2BQ7Z745 1585 aa34.35■■■■□ 3.09
FDFT1-217ENST00000530337 LAMC3Q9Y6N6 1575 aa34.23■■■■□ 3.07
FDFT1-217ENST00000530337 THOC2Q8NI27 1593 aaKnown RBP34.17■■■■□ 3.06
FDFT1-217ENST00000530337 PDS5BQ9NTI5 1447 aa34.12■■■■□ 3.05
FDFT1-217ENST00000530337 KIF21AQ7Z4S6 1674 aa34.01■■■■□ 3.04
FDFT1-217ENST00000530337 CADPSQ9ULU8 1353 aa34■■■■□ 3.03
FDFT1-217ENST00000530337 WIZO95785 1651 aa33.89■■■■□ 3.02
FDFT1-217ENST00000530337 MRC2Q9UBG0 1479 aa33.81■■■■□ 3
FDFT1-217ENST00000530337 WDR62O43379 1518 aa33.7■■■□□ 2.99
FDFT1-217ENST00000530337 CEP164Q9UPV0 1460 aa33.63■■■□□ 2.97
FDFT1-217ENST00000530337 RSF1Q96T23 1441 aaPredicted RBP33.6■■■□□ 2.97
FDFT1-217ENST00000530337 FANCD2Q9BXW9 1451 aa33.59■■■□□ 2.97
FDFT1-217ENST00000530337 CFTRP13569 1480 aa33.54■■■□□ 2.96
FDFT1-217ENST00000530337 TOP2AP11388 1531 aaKnown RBP33.47■■■□□ 2.95
FDFT1-217ENST00000530337 TRIM41Q8WV44 630 aa33.46■■■□□ 2.95
FDFT1-217ENST00000530337 URB2Q14146 1524 aaKnown RBP33.31■■■□□ 2.92
FDFT1-217ENST00000530337 OSCARQ8IYS5 282 aa33.24■■■□□ 2.91
FDFT1-217ENST00000530337 CCDC88BA6NC98 1476 aa33.13■■■□□ 2.89
FDFT1-217ENST00000530337 PRDM2Q13029 1718 aa33.04■■■□□ 2.88
FDFT1-217ENST00000530337 IFT140Q96RY7 1462 aa32.98■■■□□ 2.87
FDFT1-217ENST00000530337 ZNF608Q9ULD9 1512 aaPredicted RBP32.95■■■□□ 2.87
FDFT1-217ENST00000530337 TOPBP1Q92547 1522 aa32.92■■■□□ 2.86
FDFT1-217ENST00000530337 ABCC8Q09428 1581 aa32.83■■■□□ 2.85
FDFT1-217ENST00000530337 DNMBPQ6XZF7 1577 aa32.75■■■□□ 2.83
FDFT1-217ENST00000530337 RIMBP3CA6NJZ7 1639 aa32.73■■■□□ 2.83
FDFT1-217ENST00000530337 RIMBP3BA6NNM3 1639 aa32.73■■■□□ 2.83
FDFT1-217ENST00000530337 RIMBP3Q9UFD9 1639 aa32.73■■■□□ 2.83
FDFT1-217ENST00000530337 EIF4G3O43432 1585 aaKnown RBP32.7■■■□□ 2.82
FDFT1-217ENST00000530337 AQRO60306 1485 aaKnown RBP eCLIP32.66■■■□□ 2.823e-8■■■■□ 20.5
FDFT1-217ENST00000530337 ARHGEF11O15085 1522 aa32.64■■■□□ 2.82
FDFT1-217ENST00000530337 TARBP1Q13395 1621 aaKnown RBP32.6■■■□□ 2.81
FDFT1-217ENST00000530337 POLA1P09884 1462 aaPredicted RBP32.58■■■□□ 2.81
FDFT1-217ENST00000530337 FBLN2P98095 1184 aa32.53■■■□□ 2.8
FDFT1-217ENST00000530337 CYB5RLQ6IPT4 315 aa32.49■■■□□ 2.79
FDFT1-217ENST00000530337 RAD54L2Q9Y4B4 1467 aa32.48■■■□□ 2.79
FDFT1-217ENST00000530337 SOGA1O94964 1423 aa32.46■■■□□ 2.79
FDFT1-217ENST00000530337 CHD1O14646 1710 aa32.46■■■□□ 2.79
FDFT1-217ENST00000530337 TDRD9Q8NDG6 1382 aaKnown RBP32.45■■■□□ 2.78
FDFT1-217ENST00000530337 FGD5Q6ZNL6 1462 aa32.35■■■□□ 2.77
FDFT1-217ENST00000530337 ARAP1Q96P48 1450 aa32.31■■■□□ 2.76
FDFT1-217ENST00000530337 SNAPC4Q5SXM2 1469 aa32.29■■■□□ 2.76
FDFT1-217ENST00000530337 CUX1P39880 1505 aa32.27■■■□□ 2.76
FDFT1-217ENST00000530337 CHMP7Q8WUX9 453 aaPredicted RBP32.24■■■□□ 2.75
FDFT1-217ENST00000530337 WDR97A6NE52 1622 aa32.24■■■□□ 2.75
FDFT1-217ENST00000530337 TRHP20396 242 aaPredicted RBP32.2■■■□□ 2.75
FDFT1-217ENST00000530337 GRIN2BQ13224 1484 aa32.18■■■□□ 2.74
FDFT1-217ENST00000530337 MAGI1Q96QZ7 1491 aaPredicted RBP32.18■■■□□ 2.74
FDFT1-217ENST00000530337 CLASP1Q7Z460 1538 aa32.12■■■□□ 2.73
FDFT1-217ENST00000530337 SYNJ1O43426 1573 aa32.1■■■□□ 2.73
FDFT1-217ENST00000530337 SYNJ2O15056 1496 aa32.09■■■□□ 2.73
FDFT1-217ENST00000530337 GAPVD1Q14C86 1478 aa32.04■■■□□ 2.72
FDFT1-217ENST00000530337 SUPT5HO00267 1087 aaKnown RBP32.04■■■□□ 2.72
FDFT1-217ENST00000530337 ABCA10Q8WWZ4 1543 aa31.96■■■□□ 2.71
FDFT1-217ENST00000530337 PBRM1Q86U86 1689 aa31.93■■■□□ 2.7
FDFT1-217ENST00000530337 ABCA5Q8WWZ7 1642 aa31.89■■■□□ 2.7
FDFT1-217ENST00000530337 WRNQ14191 1432 aaPredicted RBP eCLIP31.84■■■□□ 2.69
FDFT1-217ENST00000530337 GRIN2AQ12879 1464 aa31.75■■■□□ 2.67
FDFT1-217ENST00000530337 TOP2BQ02880 1626 aa31.68■■■□□ 2.66
FDFT1-217ENST00000530337 ADAMTS12P58397 1594 aa31.68■■■□□ 2.66
FDFT1-217ENST00000530337 NUP160Q12769 1436 aa31.66■■■□□ 2.66
FDFT1-217ENST00000530337 BIVM-ERCC5R4GMW8 1640 aa31.65■■■□□ 2.66
FDFT1-217ENST00000530337 FHAD1B1AJZ9 1412 aa31.64■■■□□ 2.66
FDFT1-217ENST00000530337 ERCC6L2Q5T890 1561 aa31.64■■■□□ 2.65
FDFT1-217ENST00000530337 CEP170Q5SW79 1584 aa31.62■■■□□ 2.65
FDFT1-217ENST00000530337 ERICH3Q5RHP9 1530 aa31.54■■■□□ 2.64
FDFT1-217ENST00000530337 SHROOM2Q13796 1616 aa31.47■■■□□ 2.63
FDFT1-217ENST00000530337 PRG4Q92954 1404 aaPredicted RBP31.41■■■□□ 2.62
FDFT1-217ENST00000530337 AEBP2Q6ZN18 517 aaPredicted RBP31.4■■■□□ 2.62
FDFT1-217ENST00000530337 JPH4Q96JJ6 628 aa31.39■■■□□ 2.62
FDFT1-217ENST00000530337 RUSC2Q8N2Y8 1516 aa31.22■■■□□ 2.59
Retrieved 100 of 20,778 RNA–protein pairs in 6.8 ms