RNA–Protein interactions for RNA: ENST00000615631.4

FDFT1-223, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-223ENST00000615631 NISCHQ9Y2I1 1504 aa33.8■■■■□ 3
FDFT1-223ENST00000615631 CCDC180Q9P1Z9 1646 aa29.89■■■□□ 2.38
FDFT1-223ENST00000615631 ABCC9O60706 1549 aa28.68■■■□□ 2.18
FDFT1-223ENST00000615631 ZCCHC6Q5VYS8 1495 aaKnown RBP28.28■■■□□ 2.12
FDFT1-223ENST00000615631 DCAF1Q9Y4B6 1507 aa28.01■■■□□ 2.07
FDFT1-223ENST00000615631 DCAF8L2P0C7V8 631 aa27.98■■■□□ 2.07
FDFT1-223ENST00000615631 NACADO15069 1562 aa27.95■■■□□ 2.06
FDFT1-223ENST00000615631 MYO15BQ96JP2 1530 aa27.95■■■□□ 2.06
FDFT1-223ENST00000615631 RB1CC1Q8TDY2 1594 aa27.86■■■□□ 2.05
FDFT1-223ENST00000615631 SCRIBQ14160 1630 aa27.28■■□□□ 1.96
FDFT1-223ENST00000615631 UNC13AQ9UPW8 1703 aa27.27■■□□□ 1.96
FDFT1-223ENST00000615631 BICRAQ9NZM4 1560 aa26.98■■□□□ 1.91
FDFT1-223ENST00000615631 SHROOM4Q9ULL8 1493 aa26.97■■□□□ 1.91
FDFT1-223ENST00000615631 PABPN1Q86U42 306 aaKnown RBP eCLIP26.85■■□□□ 1.89
FDFT1-223ENST00000615631 CECR2Q9BXF3 1484 aa26.25■■□□□ 1.79
FDFT1-223ENST00000615631 EIF4G1Q04637 1599 aaKnown RBP26.24■■□□□ 1.79
FDFT1-223ENST00000615631 BAZ1AQ9NRL2 1556 aaPredicted RBP26.19■■□□□ 1.78
FDFT1-223ENST00000615631 SMARCA4P51532 1647 aa26.14■■□□□ 1.78
FDFT1-223ENST00000615631 MROH2BQ7Z745 1585 aa26.05■■□□□ 1.76
FDFT1-223ENST00000615631 CC2D2AQ9P2K1 1620 aa26.01■■□□□ 1.75
FDFT1-223ENST00000615631 RSF1Q96T23 1441 aaPredicted RBP25.92■■□□□ 1.74
FDFT1-223ENST00000615631 PEG3Q9GZU2 1588 aa25.88■■□□□ 1.73
FDFT1-223ENST00000615631 SMARCA2P51531 1590 aa25.87■■□□□ 1.73
FDFT1-223ENST00000615631 ATAD2BQ9ULI0 1458 aa25.84■■□□□ 1.73
FDFT1-223ENST00000615631 WIZO95785 1651 aa25.82■■□□□ 1.72
FDFT1-223ENST00000615631 DNAJC5BQ9UF47 199 aa25.81■■□□□ 1.72
FDFT1-223ENST00000615631 NCAPD3P42695 1498 aa25.75■■□□□ 1.71
FDFT1-223ENST00000615631 HMGXB3Q12766 1538 aa25.71■■□□□ 1.71
FDFT1-223ENST00000615631 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
FDFT1-223ENST00000615631 SUPT5HO00267 1087 aaKnown RBP25.62■■□□□ 1.69
FDFT1-223ENST00000615631 TOP2AP11388 1531 aaKnown RBP25.58■■□□□ 1.68
FDFT1-223ENST00000615631 CCDC88BA6NC98 1476 aa25.24■■□□□ 1.63
FDFT1-223ENST00000615631 LAMC3Q9Y6N6 1575 aa25.03■■□□□ 1.6
FDFT1-223ENST00000615631 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
FDFT1-223ENST00000615631 CFTRP13569 1480 aa24.99■■□□□ 1.59
FDFT1-223ENST00000615631 NESP48681 1621 aa24.97■■□□□ 1.59
FDFT1-223ENST00000615631 PRDM2Q13029 1718 aa24.94■■□□□ 1.58
FDFT1-223ENST00000615631 PDS5BQ9NTI5 1447 aa24.82■■□□□ 1.56
FDFT1-223ENST00000615631 FANCD2Q9BXW9 1451 aa24.75■■□□□ 1.55
FDFT1-223ENST00000615631 KIF21AQ7Z4S6 1674 aa24.75■■□□□ 1.55
FDFT1-223ENST00000615631 ERCC6Q03468 1493 aa24.71■■□□□ 1.55
FDFT1-223ENST00000615631 PELP1Q8IZL8 1130 aaKnown RBP24.71■■□□□ 1.55
FDFT1-223ENST00000615631 CEP164Q9UPV0 1460 aa24.69■■□□□ 1.54
FDFT1-223ENST00000615631 MRC2Q9UBG0 1479 aa24.54■■□□□ 1.52
FDFT1-223ENST00000615631 THOC2Q8NI27 1593 aaKnown RBP24.53■■□□□ 1.52
FDFT1-223ENST00000615631 ABCC8Q09428 1581 aa24.49■■□□□ 1.51
FDFT1-223ENST00000615631 URB2Q14146 1524 aaKnown RBP24.46■■□□□ 1.51
FDFT1-223ENST00000615631 WDR62O43379 1518 aa24.46■■□□□ 1.51
FDFT1-223ENST00000615631 DNMBPQ6XZF7 1577 aa24.45■■□□□ 1.5
FDFT1-223ENST00000615631 WRNQ14191 1432 aaPredicted RBP eCLIP24.45■■□□□ 1.5
FDFT1-223ENST00000615631 CUX1P39880 1505 aa24.41■■□□□ 1.5
FDFT1-223ENST00000615631 TOPBP1Q92547 1522 aa24.41■■□□□ 1.5
FDFT1-223ENST00000615631 SYNJ1O43426 1573 aa24.37■■□□□ 1.49
FDFT1-223ENST00000615631 TOP2BQ02880 1626 aa24.37■■□□□ 1.49
FDFT1-223ENST00000615631 BIVM-ERCC5R4GMW8 1640 aa24.37■■□□□ 1.49
FDFT1-223ENST00000615631 CUX2O14529 1486 aa24.27■■□□□ 1.48
FDFT1-223ENST00000615631 MYT1Q01538 1121 aa24.27■■□□□ 1.48
FDFT1-223ENST00000615631 FGD5Q6ZNL6 1462 aa24.26■■□□□ 1.47
FDFT1-223ENST00000615631 POLA1P09884 1462 aaPredicted RBP24.24■■□□□ 1.47
FDFT1-223ENST00000615631 CHIC1Q5VXU3 224 aa24.2■■□□□ 1.46
FDFT1-223ENST00000615631 TRIM41Q8WV44 630 aa24.2■■□□□ 1.46
FDFT1-223ENST00000615631 IFT140Q96RY7 1462 aa24.14■■□□□ 1.45
FDFT1-223ENST00000615631 SOGA1O94964 1423 aa24.13■■□□□ 1.45
FDFT1-223ENST00000615631 TARBP1Q13395 1621 aaKnown RBP24.12■■□□□ 1.45
FDFT1-223ENST00000615631 RAD54L2Q9Y4B4 1467 aa24.1■■□□□ 1.45
FDFT1-223ENST00000615631 WDR97A6NE52 1622 aa24.08■■□□□ 1.45
FDFT1-223ENST00000615631 ABCA10Q8WWZ4 1543 aa24.05■■□□□ 1.44
FDFT1-223ENST00000615631 ZNF608Q9ULD9 1512 aaPredicted RBP23.96■■□□□ 1.43
FDFT1-223ENST00000615631 EIF4G3O43432 1585 aaKnown RBP23.95■■□□□ 1.42
FDFT1-223ENST00000615631 ABCA5Q8WWZ7 1642 aa23.94■■□□□ 1.42
FDFT1-223ENST00000615631 TDRD9Q8NDG6 1382 aaKnown RBP23.92■■□□□ 1.42
FDFT1-223ENST00000615631 KIF27Q86VH2 1401 aa23.9■■□□□ 1.42
FDFT1-223ENST00000615631 AQRO60306 1485 aaKnown RBP eCLIP23.89■■□□□ 1.413e-7■■■■□ 23
FDFT1-223ENST00000615631 GAPVD1Q14C86 1478 aa23.88■■□□□ 1.41
FDFT1-223ENST00000615631 PBRM1Q86U86 1689 aa23.85■■□□□ 1.41
FDFT1-223ENST00000615631 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
FDFT1-223ENST00000615631 RUSC2Q8N2Y8 1516 aa23.8■■□□□ 1.4
FDFT1-223ENST00000615631 EEA1Q15075 1411 aa23.79■■□□□ 1.4
FDFT1-223ENST00000615631 ERICH3Q5RHP9 1530 aa23.79■■□□□ 1.4
FDFT1-223ENST00000615631 MAGI1Q96QZ7 1491 aaPredicted RBP23.71■■□□□ 1.39
FDFT1-223ENST00000615631 SNAPC4Q5SXM2 1469 aa23.7■■□□□ 1.39
FDFT1-223ENST00000615631 IGF1RP08069 1367 aa23.7■■□□□ 1.38
FDFT1-223ENST00000615631 CUL7Q14999 1698 aa23.7■■□□□ 1.38
FDFT1-223ENST00000615631 ADAMTS12P58397 1594 aa23.67■■□□□ 1.38
FDFT1-223ENST00000615631 FAM9AQ8IZU1 332 aaPredicted RBP23.66■■□□□ 1.38
FDFT1-223ENST00000615631 CSRNP3Q8WYN3 585 aa23.64■■□□□ 1.37
FDFT1-223ENST00000615631 FHAD1B1AJZ9 1412 aa23.62■■□□□ 1.37
FDFT1-223ENST00000615631 SYNJ2O15056 1496 aa23.61■■□□□ 1.37
FDFT1-223ENST00000615631 CARMIL1Q5VZK9 1371 aa23.59■■□□□ 1.37
FDFT1-223ENST00000615631 CHD1O14646 1710 aa23.56■■□□□ 1.36
FDFT1-223ENST00000615631 PRXQ9BXM0 1461 aa23.56■■□□□ 1.36
FDFT1-223ENST00000615631 RAPGEF2Q9Y4G8 1499 aa23.53■■□□□ 1.36
FDFT1-223ENST00000615631 KIF21BO75037 1637 aa23.52■■□□□ 1.36
FDFT1-223ENST00000615631 CHMP7Q8WUX9 453 aaPredicted RBP23.52■■□□□ 1.36
FDFT1-223ENST00000615631 GRIN2AQ12879 1464 aa23.51■■□□□ 1.35
FDFT1-223ENST00000615631 FBLN2P98095 1184 aa23.5■■□□□ 1.35
FDFT1-223ENST00000615631 GOLGA3Q08378 1498 aa23.41■■□□□ 1.34
FDFT1-223ENST00000615631 CEP170Q5SW79 1584 aa23.37■■□□□ 1.33
FDFT1-223ENST00000615631 NUP160Q12769 1436 aa23.37■■□□□ 1.33
FDFT1-223ENST00000615631 CTTNBP2Q8WZ74 1663 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms