RNA–Protein interactions for RNA: ENST00000485307.5

SLC22A23-209, Transcript of solute carrier family 22 member 23, humanhuman

TSL 1 (best)

Gene SLC22A23, Length 1,574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC22A23-209ENST00000485307 NISCHQ9Y2I1 1504 aa30.62■■■□□ 2.49
SLC22A23-209ENST00000485307 CCDC180Q9P1Z9 1646 aa27.08■■□□□ 1.93
SLC22A23-209ENST00000485307 ABCC9O60706 1549 aa26.54■■□□□ 1.84
SLC22A23-209ENST00000485307 ZCCHC6Q5VYS8 1495 aaKnown RBP25.56■■□□□ 1.68
SLC22A23-209ENST00000485307 RB1CC1Q8TDY2 1594 aa25.51■■□□□ 1.67
SLC22A23-209ENST00000485307 DCAF8L2P0C7V8 631 aa25.47■■□□□ 1.67
SLC22A23-209ENST00000485307 NACADO15069 1562 aa25.46■■□□□ 1.67
SLC22A23-209ENST00000485307 MYO15BQ96JP2 1530 aa25.35■■□□□ 1.65
SLC22A23-209ENST00000485307 DCAF1Q9Y4B6 1507 aa25.33■■□□□ 1.65
SLC22A23-209ENST00000485307 UNC13AQ9UPW8 1703 aa24.91■■□□□ 1.58
SLC22A23-209ENST00000485307 PABPN1Q86U42 306 aaKnown RBP eCLIP24.76■■□□□ 1.55
SLC22A23-209ENST00000485307 BICRAQ9NZM4 1560 aa24.76■■□□□ 1.55
SLC22A23-209ENST00000485307 SCRIBQ14160 1630 aa24.75■■□□□ 1.55
SLC22A23-209ENST00000485307 SHROOM4Q9ULL8 1493 aa24.52■■□□□ 1.52
SLC22A23-209ENST00000485307 DNAJC5BQ9UF47 199 aa24.5■■□□□ 1.51
SLC22A23-209ENST00000485307 EIF4G1Q04637 1599 aaKnown RBP24.1■■□□□ 1.45
SLC22A23-209ENST00000485307 CC2D2AQ9P2K1 1620 aa24.02■■□□□ 1.44
SLC22A23-209ENST00000485307 CECR2Q9BXF3 1484 aa23.88■■□□□ 1.41
SLC22A23-209ENST00000485307 SMARCA4P51532 1647 aa23.7■■□□□ 1.38
SLC22A23-209ENST00000485307 BAZ1AQ9NRL2 1556 aaPredicted RBP23.7■■□□□ 1.38
SLC22A23-209ENST00000485307 SUPT5HO00267 1087 aaKnown RBP23.69■■□□□ 1.38
SLC22A23-209ENST00000485307 MROH2BQ7Z745 1585 aa23.62■■□□□ 1.37
SLC22A23-209ENST00000485307 ATAD2BQ9ULI0 1458 aa23.53■■□□□ 1.36
SLC22A23-209ENST00000485307 NCAPD3P42695 1498 aa23.5■■□□□ 1.35
SLC22A23-209ENST00000485307 SMARCA2P51531 1590 aa23.48■■□□□ 1.35
SLC22A23-209ENST00000485307 PEG3Q9GZU2 1588 aa23.47■■□□□ 1.35
SLC22A23-209ENST00000485307 RSF1Q96T23 1441 aaPredicted RBP23.43■■□□□ 1.34
SLC22A23-209ENST00000485307 HMGXB3Q12766 1538 aa23.38■■□□□ 1.33
SLC22A23-209ENST00000485307 WIZO95785 1651 aa23.37■■□□□ 1.33
SLC22A23-209ENST00000485307 BAZ1BQ9UIG0 1483 aaKnown RBP23.32■■□□□ 1.32
SLC22A23-209ENST00000485307 TOP2AP11388 1531 aaKnown RBP23.11■■□□□ 1.29
SLC22A23-209ENST00000485307 NESP48681 1621 aa22.94■■□□□ 1.26
SLC22A23-209ENST00000485307 LAMC3Q9Y6N6 1575 aa22.89■■□□□ 1.25
SLC22A23-209ENST00000485307 ERCC6Q03468 1493 aa22.88■■□□□ 1.25
SLC22A23-209ENST00000485307 CCDC88BA6NC98 1476 aa22.86■■□□□ 1.25
SLC22A23-209ENST00000485307 CADPSQ9ULU8 1353 aa22.8■■□□□ 1.24
SLC22A23-209ENST00000485307 CUX2O14529 1486 aa22.74■■□□□ 1.23
SLC22A23-209ENST00000485307 PDS5BQ9NTI5 1447 aa22.73■■□□□ 1.23
SLC22A23-209ENST00000485307 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
SLC22A23-209ENST00000485307 CFTRP13569 1480 aa22.71■■□□□ 1.23
SLC22A23-209ENST00000485307 KIF21AQ7Z4S6 1674 aa22.66■■□□□ 1.22
SLC22A23-209ENST00000485307 THOC2Q8NI27 1593 aaKnown RBP22.65■■□□□ 1.22
SLC22A23-209ENST00000485307 FANCD2Q9BXW9 1451 aa22.53■■□□□ 1.2
SLC22A23-209ENST00000485307 PRDM2Q13029 1718 aa22.52■■□□□ 1.2
SLC22A23-209ENST00000485307 MRC2Q9UBG0 1479 aa22.5■■□□□ 1.19
SLC22A23-209ENST00000485307 CEP164Q9UPV0 1460 aa22.5■■□□□ 1.19
SLC22A23-209ENST00000485307 WDR62O43379 1518 aa22.46■■□□□ 1.19
SLC22A23-209ENST00000485307 TRIM41Q8WV44 630 aa22.38■■□□□ 1.17
SLC22A23-209ENST00000485307 URB2Q14146 1524 aaKnown RBP22.31■■□□□ 1.16
SLC22A23-209ENST00000485307 TOPBP1Q92547 1522 aa22.21■■□□□ 1.15
SLC22A23-209ENST00000485307 DNMBPQ6XZF7 1577 aa22.18■■□□□ 1.14
SLC22A23-209ENST00000485307 ABCC8Q09428 1581 aa22.18■■□□□ 1.14
SLC22A23-209ENST00000485307 DNAJC5Q9H3Z4 198 aa22.16■■□□□ 1.14
SLC22A23-209ENST00000485307 CUX1P39880 1505 aa22.14■■□□□ 1.13
SLC22A23-209ENST00000485307 WRNQ14191 1432 aaPredicted RBP eCLIP22.09■■□□□ 1.13
SLC22A23-209ENST00000485307 IFT140Q96RY7 1462 aa22.05■■□□□ 1.12
SLC22A23-209ENST00000485307 POLA1P09884 1462 aaPredicted RBP22.04■■□□□ 1.12
SLC22A23-209ENST00000485307 FGD5Q6ZNL6 1462 aa22.01■■□□□ 1.11
SLC22A23-209ENST00000485307 SYNJ1O43426 1573 aa22.01■■□□□ 1.11
SLC22A23-209ENST00000485307 TOP2BQ02880 1626 aa21.99■■□□□ 1.11
SLC22A23-209ENST00000485307 BIVM-ERCC5R4GMW8 1640 aa21.98■■□□□ 1.11
SLC22A23-209ENST00000485307 ZNF608Q9ULD9 1512 aaPredicted RBP21.96■■□□□ 1.11
SLC22A23-209ENST00000485307 TARBP1Q13395 1621 aaKnown RBP21.94■■□□□ 1.1
SLC22A23-209ENST00000485307 RAD54L2Q9Y4B4 1467 aa21.94■■□□□ 1.1
SLC22A23-209ENST00000485307 SOGA1O94964 1423 aa21.94■■□□□ 1.1
SLC22A23-209ENST00000485307 EEA1Q15075 1411 aa21.94■■□□□ 1.1
SLC22A23-209ENST00000485307 EIF4G3O43432 1585 aaKnown RBP21.87■■□□□ 1.09
SLC22A23-209ENST00000485307 WDR97A6NE52 1622 aa21.82■■□□□ 1.08
SLC22A23-209ENST00000485307 FAM9AQ8IZU1 332 aaPredicted RBP21.82■■□□□ 1.08
SLC22A23-209ENST00000485307 ABCA10Q8WWZ4 1543 aa21.81■■□□□ 1.08
SLC22A23-209ENST00000485307 TDRD9Q8NDG6 1382 aaKnown RBP21.81■■□□□ 1.08
SLC22A23-209ENST00000485307 AQRO60306 1485 aaKnown RBP eCLIP21.8■■□□□ 1.082e-6■■■■■ 32.3
SLC22A23-209ENST00000485307 LOC105371045A0A1W2PR82 267 aa21.75■■□□□ 1.07
SLC22A23-209ENST00000485307 OSCARQ8IYS5 282 aa21.72■■□□□ 1.07
SLC22A23-209ENST00000485307 ABCA5Q8WWZ7 1642 aa21.7■■□□□ 1.06
SLC22A23-209ENST00000485307 CSRNP3Q8WYN3 585 aa21.69■■□□□ 1.06
SLC22A23-209ENST00000485307 GAPVD1Q14C86 1478 aa21.69■■□□□ 1.06
SLC22A23-209ENST00000485307 GRIN2BQ13224 1484 aa21.65■■□□□ 1.06
SLC22A23-209ENST00000485307 PBRM1Q86U86 1689 aa21.61■■□□□ 1.05
SLC22A23-209ENST00000485307 SNAPC4Q5SXM2 1469 aa21.61■■□□□ 1.05
SLC22A23-209ENST00000485307 CHD1O14646 1710 aa21.59■■□□□ 1.05
SLC22A23-209ENST00000485307 MAGI1Q96QZ7 1491 aaPredicted RBP21.59■■□□□ 1.05
SLC22A23-209ENST00000485307 KIF27Q86VH2 1401 aa21.58■■□□□ 1.04
SLC22A23-209ENST00000485307 RUSC2Q8N2Y8 1516 aa21.56■■□□□ 1.04
SLC22A23-209ENST00000485307 GOLGA3Q08378 1498 aa21.55■■□□□ 1.04
SLC22A23-209ENST00000485307 KIF21BO75037 1637 aa21.54■■□□□ 1.04
SLC22A23-209ENST00000485307 ERICH3Q5RHP9 1530 aa21.54■■□□□ 1.04
SLC22A23-209ENST00000485307 FBLN2P98095 1184 aa21.51■■□□□ 1.03
SLC22A23-209ENST00000485307 SYNJ2O15056 1496 aa21.5■■□□□ 1.03
SLC22A23-209ENST00000485307 IGF1RP08069 1367 aa21.49■■□□□ 1.03
SLC22A23-209ENST00000485307 TNIKQ9UKE5 1360 aa21.48■■□□□ 1.03
SLC22A23-209ENST00000485307 ADAMTS12P58397 1594 aa21.48■■□□□ 1.03
SLC22A23-209ENST00000485307 CHMP7Q8WUX9 453 aaPredicted RBP21.46■■□□□ 1.03
SLC22A23-209ENST00000485307 FHAD1B1AJZ9 1412 aa21.44■■□□□ 1.02
SLC22A23-209ENST00000485307 UBTFP17480 764 aaKnown RBP21.43■■□□□ 1.02
SLC22A23-209ENST00000485307 EHMT2Q96KQ7 1210 aa21.43■■□□□ 1.02
SLC22A23-209ENST00000485307 RIMBP3CA6NJZ7 1639 aa21.41■■□□□ 1.02
SLC22A23-209ENST00000485307 RIMBP3BA6NNM3 1639 aa21.41■■□□□ 1.02
SLC22A23-209ENST00000485307 RIMBP3Q9UFD9 1639 aa21.41■■□□□ 1.02
SLC22A23-209ENST00000485307 ARHGEF11O15085 1522 aa21.4■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 8.7 ms