RNA–Protein interactions for RNA: ENST00000538291.5

SCARB1-205, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5

Gene SCARB1, Length 5,527 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-205ENST00000538291 DCAF8L2P0C7V8 631 aa29.34■■■□□ 2.29
SCARB1-205ENST00000538291 SUPT5HO00267 1087 aaKnown RBP27.54■■■□□ 2
SCARB1-205ENST00000538291 NISCHQ9Y2I1 1504 aa27.33■■□□□ 1.97
SCARB1-205ENST00000538291 SHROOM4Q9ULL8 1493 aa26.91■■□□□ 1.9
SCARB1-205ENST00000538291 EHMT2Q96KQ7 1210 aa26.79■■□□□ 1.88
SCARB1-205ENST00000538291 APLP2Q06481 763 aa26.61■■□□□ 1.85
SCARB1-205ENST00000538291 PELP1Q8IZL8 1130 aaKnown RBP26.51■■□□□ 1.83
SCARB1-205ENST00000538291 FAM9AQ8IZU1 332 aaPredicted RBP26.45■■□□□ 1.83
SCARB1-205ENST00000538291 TTBK1Q5TCY1 1321 aaPredicted RBP25.89■■□□□ 1.73
SCARB1-205ENST00000538291 RANGAP1P46060 587 aaPredicted RBP25.74■■□□□ 1.71
SCARB1-205ENST00000538291 ATP1B4Q9UN42 357 aaPredicted RBP25.67■■□□□ 1.7
SCARB1-205ENST00000538291 PCGF6Q9BYE7 350 aa25.62■■□□□ 1.69
SCARB1-205ENST00000538291 TRIM41Q8WV44 630 aa25.55■■□□□ 1.68
SCARB1-205ENST00000538291 UBTFP17480 764 aaKnown RBP25.4■■□□□ 1.66
SCARB1-205ENST00000538291 CCER1Q8TC90 406 aaPredicted RBP25.36■■□□□ 1.65
SCARB1-205ENST00000538291 ERICH6Q7L0X2 663 aa25.35■■□□□ 1.65
SCARB1-205ENST00000538291 CENPBP07199 599 aaPredicted RBP25.34■■□□□ 1.65
SCARB1-205ENST00000538291 ZEB1P37275 1124 aaPredicted RBP25.32■■□□□ 1.64
SCARB1-205ENST00000538291 NEFLP07196 543 aa25.02■■□□□ 1.6
SCARB1-205ENST00000538291 MYT1LQ9UL68 1186 aa24.91■■□□□ 1.58
SCARB1-205ENST00000538291 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.82■■□□□ 1.56
SCARB1-205ENST00000538291 HNRNPUL2Q1KMD3 747 aaKnown RBP24.82■■□□□ 1.56
SCARB1-205ENST00000538291 YTHDC1Q96MU7 727 aaKnown RBP24.75■■□□□ 1.55
SCARB1-205ENST00000538291 PPARGC1BQ86YN6 1023 aaKnown RBP24.69■■□□□ 1.54
SCARB1-205ENST00000538291 ITGAEP38570 1179 aa24.6■■□□□ 1.53
SCARB1-205ENST00000538291 POLR3GLQ9BT43 218 aa24.58■■□□□ 1.53
SCARB1-205ENST00000538291 TRIM26Q12899 539 aaPredicted RBP24.45■■□□□ 1.5
SCARB1-205ENST00000538291 DAXXQ9UER7 740 aaPredicted RBP24.42■■□□□ 1.5
SCARB1-205ENST00000538291 CHIC1Q5VXU3 224 aa24.35■■□□□ 1.49
SCARB1-205ENST00000538291 SLC4A1APQ9BWU0 796 aaKnown RBP24.27■■□□□ 1.48
SCARB1-205ENST00000538291 CNGB1Q14028 1251 aaPredicted RBP24.24■■□□□ 1.47
SCARB1-205ENST00000538291 LOC105371045A0A1W2PR82 267 aa24.09■■□□□ 1.45
SCARB1-205ENST00000538291 HRCP23327 699 aa24.08■■□□□ 1.44
SCARB1-205ENST00000538291 MYT1Q01538 1121 aa24.07■■□□□ 1.44
SCARB1-205ENST00000538291 FAM50AQ14320 339 aaKnown RBP23.97■■□□□ 1.43
SCARB1-205ENST00000538291 TRIM52Q96A61 297 aa23.93■■□□□ 1.42
SCARB1-205ENST00000538291 CLSPNQ9HAW4 1339 aa23.92■■□□□ 1.42
SCARB1-205ENST00000538291 PABPN1Q86U42 306 aaKnown RBP eCLIP23.89■■□□□ 1.41
SCARB1-205ENST00000538291 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
SCARB1-205ENST00000538291 ABCC9O60706 1549 aa23.77■■□□□ 1.4
SCARB1-205ENST00000538291 FBLN2P98095 1184 aa23.76■■□□□ 1.39
SCARB1-205ENST00000538291 NEUROD1Q13562 356 aa23.69■■□□□ 1.38
SCARB1-205ENST00000538291 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
SCARB1-205ENST00000538291 RTL5Q5HYW3 569 aaPredicted RBP23.65■■□□□ 1.38
SCARB1-205ENST00000538291 DIEXFQ68CQ4 756 aaKnown RBP23.63■■□□□ 1.37
SCARB1-205ENST00000538291 ZBTB47Q9UFB7 747 aaPredicted RBP23.61■■□□□ 1.37
SCARB1-205ENST00000538291 BCANQ96GW7 911 aa23.53■■□□□ 1.36
SCARB1-205ENST00000538291 SLC24A1O60721 1099 aa23.48■■□□□ 1.35
SCARB1-205ENST00000538291 ANP32CO43423 234 aa23.48■■□□□ 1.35
SCARB1-205ENST00000538291 NEFMP07197 916 aa23.46■■□□□ 1.35
SCARB1-205ENST00000538291 CANXP27824 592 aaKnown RBP23.37■■□□□ 1.33
SCARB1-205ENST00000538291 ARID3CA6NKF2 412 aa23.35■■□□□ 1.33
SCARB1-205ENST00000538291 P3H3Q8IVL6 736 aa23.33■■□□□ 1.32
SCARB1-205ENST00000538291 ESF1Q9H501 851 aaKnown RBP23.31■■□□□ 1.32
SCARB1-205ENST00000538291 ZNF777Q9ULD5 760 aaPredicted RBP23.29■■□□□ 1.32
SCARB1-205ENST00000538291 CDK11AQ9UQ88 783 aaPredicted RBP23.29■■□□□ 1.32
SCARB1-205ENST00000538291 BCL11AQ9H165 835 aa23.26■■□□□ 1.31
SCARB1-205ENST00000538291 CSRNP3Q8WYN3 585 aa23.17■■□□□ 1.3
SCARB1-205ENST00000538291 STAG3Q9UJ98 1225 aa23.13■■□□□ 1.29
SCARB1-205ENST00000538291 NPM1P06748 294 aaKnown RBP eCLIP23.12■■□□□ 1.29
SCARB1-205ENST00000538291 CHGAP10645 457 aaKnown RBP23.07■■□□□ 1.28
SCARB1-205ENST00000538291 PLPPR3Q6T4P5 718 aa22.99■■□□□ 1.27
SCARB1-205ENST00000538291 GTF3C3Q9Y5Q9 886 aa22.98■■□□□ 1.27
SCARB1-205ENST00000538291 CCDC180Q9P1Z9 1646 aa22.92■■□□□ 1.26
SCARB1-205ENST00000538291 TONSLQ96HA7 1378 aa22.89■■□□□ 1.25
SCARB1-205ENST00000538291 ANP32AP39687 249 aaKnown RBP22.87■■□□□ 1.25
SCARB1-205ENST00000538291 GRWD1Q9BQ67 446 aaKnown RBP eCLIP22.77■■□□□ 1.24
SCARB1-205ENST00000538291 SCRIBQ14160 1630 aa22.76■■□□□ 1.23
SCARB1-205ENST00000538291 HSP90AA1P07900 732 aaKnown RBP22.75■■□□□ 1.23
SCARB1-205ENST00000538291 NPM2Q86SE8 214 aaKnown RBP22.75■■□□□ 1.23
SCARB1-205ENST00000538291 TSPY4P0CV99 314 aa22.72■■□□□ 1.23
SCARB1-205ENST00000538291 TSPY10P0CW01 314 aa22.72■■□□□ 1.23
SCARB1-205ENST00000538291 UPF2Q9HAU5 1272 aaKnown RBP22.71■■□□□ 1.23
SCARB1-205ENST00000538291 CHIC2Q9UKJ5 165 aa22.69■■□□□ 1.22
SCARB1-205ENST00000538291 ANP32BQ92688 251 aaKnown RBP22.68■■□□□ 1.22
SCARB1-205ENST00000538291 HNRNPUQ00839 825 aaKnown RBP eCLIP22.65■■□□□ 1.222e-6■□□□□ 11
SCARB1-205ENST00000538291 FAM9BQ8IZU0 186 aa22.65■■□□□ 1.22
SCARB1-205ENST00000538291 ZCCHC6Q5VYS8 1495 aaKnown RBP22.64■■□□□ 1.22
SCARB1-205ENST00000538291 CHMP7Q8WUX9 453 aaPredicted RBP22.64■■□□□ 1.22
SCARB1-205ENST00000538291 SCAF1Q9H7N4 1312 aaKnown RBP22.63■■□□□ 1.21
SCARB1-205ENST00000538291 TMC1Q8TDI8 760 aa22.61■■□□□ 1.21
SCARB1-205ENST00000538291 SALL2Q9Y467 1007 aaPredicted RBP22.6■■□□□ 1.21
SCARB1-205ENST00000538291 WDR43Q15061 677 aaKnown RBP eCLIP22.59■■□□□ 1.218e-6■■□□□ 11.7
SCARB1-205ENST00000538291 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.59■■□□□ 1.21
SCARB1-205ENST00000538291 DDX10Q13206 875 aaKnown RBP22.59■■□□□ 1.21
SCARB1-205ENST00000538291 ACIN1Q9UKV3 1341 aaKnown RBP22.58■■□□□ 1.21
SCARB1-205ENST00000538291 KDM2AQ9Y2K7 1162 aa22.56■■□□□ 1.2
SCARB1-205ENST00000538291 MTUS2Q5JR59 1369 aa22.55■■□□□ 1.2
SCARB1-205ENST00000538291 FKBP8Q14318 412 aa22.55■■□□□ 1.2
SCARB1-205ENST00000538291 A0A0G2JS52 829 aa22.53■■□□□ 1.2
SCARB1-205ENST00000538291 PPP1R15AO75807 674 aaPredicted RBP22.48■■□□□ 1.19
SCARB1-205ENST00000538291 RB1CC1Q8TDY2 1594 aa22.45■■□□□ 1.19
SCARB1-205ENST00000538291 CCDC136Q96JN2 1154 aa22.43■■□□□ 1.18
SCARB1-205ENST00000538291 C14orf37Q86TY3 774 aa22.42■■□□□ 1.18
SCARB1-205ENST00000538291 MRS2Q9HD23 443 aa22.42■■□□□ 1.18
SCARB1-205ENST00000538291 ZBTB7CA1YPR0 619 aa22.42■■□□□ 1.18
SCARB1-205ENST00000538291 MYH16Q9H6N6 1097 aa22.42■■□□□ 1.18
SCARB1-205ENST00000538291 KCNH8Q96L42 1107 aa22.41■■□□□ 1.18
SCARB1-205ENST00000538291 PLEKHD1A6NEE1 506 aa22.37■■□□□ 1.17
SCARB1-205ENST00000538291 PLEKHG5O94827 1062 aa22.36■■□□□ 1.17
Retrieved 100 of 20,778 RNA–protein pairs in 142.3 ms