RNA–Protein interactions for RNA: ENST00000525900.5

FDFT1-209, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 5 BASIC

Gene FDFT1, Length 1,596 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-209ENST00000525900 NISCHQ9Y2I1 1504 aa48.35■■■■■ 5.33
FDFT1-209ENST00000525900 CCDC180Q9P1Z9 1646 aa42.91■■■■■ 4.46
FDFT1-209ENST00000525900 ABCC9O60706 1549 aa41.92■■■■■ 4.3
FDFT1-209ENST00000525900 DCAF8L2P0C7V8 631 aa40.37■■■■■ 4.05
FDFT1-209ENST00000525900 ZCCHC6Q5VYS8 1495 aaKnown RBP40.31■■■■■ 4.04
FDFT1-209ENST00000525900 RB1CC1Q8TDY2 1594 aa40.3■■■■■ 4.04
FDFT1-209ENST00000525900 NACADO15069 1562 aa40.27■■■■■ 4.04
FDFT1-209ENST00000525900 MYO15BQ96JP2 1530 aa40.02■■■■■ 4
FDFT1-209ENST00000525900 DCAF1Q9Y4B6 1507 aa39.94■■■■□ 3.98
FDFT1-209ENST00000525900 UNC13AQ9UPW8 1703 aa39.59■■■■□ 3.93
FDFT1-209ENST00000525900 SCRIBQ14160 1630 aa39.26■■■■□ 3.88
FDFT1-209ENST00000525900 PABPN1Q86U42 306 aaKnown RBP eCLIP39.2■■■■□ 3.87
FDFT1-209ENST00000525900 BICRAQ9NZM4 1560 aa39.18■■■■□ 3.86
FDFT1-209ENST00000525900 SHROOM4Q9ULL8 1493 aa38.57■■■■□ 3.77
FDFT1-209ENST00000525900 DNAJC5BQ9UF47 199 aa38.39■■■■□ 3.74
FDFT1-209ENST00000525900 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
FDFT1-209ENST00000525900 CC2D2AQ9P2K1 1620 aa37.93■■■■□ 3.66
FDFT1-209ENST00000525900 CECR2Q9BXF3 1484 aa37.73■■■■□ 3.63
FDFT1-209ENST00000525900 SMARCA4P51532 1647 aa37.53■■■■□ 3.6
FDFT1-209ENST00000525900 BAZ1AQ9NRL2 1556 aaPredicted RBP37.44■■■■□ 3.58
FDFT1-209ENST00000525900 MROH2BQ7Z745 1585 aa37.33■■■■□ 3.57
FDFT1-209ENST00000525900 ATAD2BQ9ULI0 1458 aa37.25■■■■□ 3.55
FDFT1-209ENST00000525900 SMARCA2P51531 1590 aa37.16■■■■□ 3.54
FDFT1-209ENST00000525900 NCAPD3P42695 1498 aa37.16■■■■□ 3.54
FDFT1-209ENST00000525900 PEG3Q9GZU2 1588 aa37.1■■■■□ 3.53
FDFT1-209ENST00000525900 HMGXB3Q12766 1538 aa37■■■■□ 3.51
FDFT1-209ENST00000525900 WIZO95785 1651 aa36.98■■■■□ 3.51
FDFT1-209ENST00000525900 BAZ1BQ9UIG0 1483 aaKnown RBP36.93■■■■□ 3.5
FDFT1-209ENST00000525900 RSF1Q96T23 1441 aaPredicted RBP36.9■■■■□ 3.5
FDFT1-209ENST00000525900 TOP2AP11388 1531 aaKnown RBP36.49■■■■□ 3.43
FDFT1-209ENST00000525900 NESP48681 1621 aa36.36■■■■□ 3.41
FDFT1-209ENST00000525900 LAMC3Q9Y6N6 1575 aa36.17■■■■□ 3.38
FDFT1-209ENST00000525900 SUPT5HO00267 1087 aaKnown RBP36.13■■■■□ 3.37
FDFT1-209ENST00000525900 CCDC88BA6NC98 1476 aa36.09■■■■□ 3.37
FDFT1-209ENST00000525900 CADPSQ9ULU8 1353 aa36.08■■■■□ 3.37
FDFT1-209ENST00000525900 ERCC6Q03468 1493 aa36.04■■■■□ 3.36
FDFT1-209ENST00000525900 KIF21AQ7Z4S6 1674 aa35.96■■■■□ 3.35
FDFT1-209ENST00000525900 CFTRP13569 1480 aa35.92■■■■□ 3.34
FDFT1-209ENST00000525900 PDS5BQ9NTI5 1447 aa35.88■■■■□ 3.33
FDFT1-209ENST00000525900 PRDM2Q13029 1718 aa35.76■■■■□ 3.32
FDFT1-209ENST00000525900 THOC2Q8NI27 1593 aaKnown RBP35.74■■■■□ 3.31
FDFT1-209ENST00000525900 FANCD2Q9BXW9 1451 aa35.72■■■■□ 3.31
FDFT1-209ENST00000525900 CEP164Q9UPV0 1460 aa35.64■■■■□ 3.3
FDFT1-209ENST00000525900 CUX2O14529 1486 aa35.57■■■■□ 3.28
FDFT1-209ENST00000525900 MRC2Q9UBG0 1479 aa35.55■■■■□ 3.28
FDFT1-209ENST00000525900 WDR62O43379 1518 aa35.44■■■■□ 3.26
FDFT1-209ENST00000525900 URB2Q14146 1524 aaKnown RBP35.39■■■■□ 3.26
FDFT1-209ENST00000525900 TOPBP1Q92547 1522 aa35.17■■■■□ 3.22
FDFT1-209ENST00000525900 DNMBPQ6XZF7 1577 aa35.13■■■■□ 3.21
FDFT1-209ENST00000525900 ABCC8Q09428 1581 aa35.07■■■■□ 3.2
FDFT1-209ENST00000525900 CUX1P39880 1505 aa35■■■■□ 3.19
FDFT1-209ENST00000525900 POLA1P09884 1462 aaPredicted RBP34.89■■■■□ 3.18
FDFT1-209ENST00000525900 IFT140Q96RY7 1462 aa34.85■■■■□ 3.17
FDFT1-209ENST00000525900 FGD5Q6ZNL6 1462 aa34.83■■■■□ 3.17
FDFT1-209ENST00000525900 TARBP1Q13395 1621 aaKnown RBP34.81■■■■□ 3.16
FDFT1-209ENST00000525900 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
FDFT1-209ENST00000525900 RAD54L2Q9Y4B4 1467 aa34.78■■■■□ 3.16
FDFT1-209ENST00000525900 WRNQ14191 1432 aaPredicted RBP eCLIP34.77■■■■□ 3.16
FDFT1-209ENST00000525900 SYNJ1O43426 1573 aa34.77■■■■□ 3.16
FDFT1-209ENST00000525900 BIVM-ERCC5R4GMW8 1640 aa34.72■■■■□ 3.15
FDFT1-209ENST00000525900 SOGA1O94964 1423 aa34.72■■■■□ 3.15
FDFT1-209ENST00000525900 TOP2BQ02880 1626 aa34.71■■■■□ 3.15
FDFT1-209ENST00000525900 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
FDFT1-209ENST00000525900 AQRO60306 1485 aaKnown RBP eCLIP34.6■■■■□ 3.133e-7■■■■□ 23
FDFT1-209ENST00000525900 WDR97A6NE52 1622 aa34.59■■■■□ 3.13
FDFT1-209ENST00000525900 TDRD9Q8NDG6 1382 aaKnown RBP34.54■■■■□ 3.12
FDFT1-209ENST00000525900 ABCA10Q8WWZ4 1543 aa34.46■■■■□ 3.11
FDFT1-209ENST00000525900 ABCA5Q8WWZ7 1642 aa34.37■■■■□ 3.09
FDFT1-209ENST00000525900 PBRM1Q86U86 1689 aa34.33■■■■□ 3.09
FDFT1-209ENST00000525900 DNAJC5Q9H3Z4 198 aa34.33■■■■□ 3.09
FDFT1-209ENST00000525900 GAPVD1Q14C86 1478 aa34.32■■■■□ 3.09
FDFT1-209ENST00000525900 GRIN2BQ13224 1484 aa34.27■■■■□ 3.08
FDFT1-209ENST00000525900 SNAPC4Q5SXM2 1469 aa34.27■■■■□ 3.08
FDFT1-209ENST00000525900 CHD1O14646 1710 aa34.25■■■■□ 3.07
FDFT1-209ENST00000525900 MAGI1Q96QZ7 1491 aaPredicted RBP34.16■■■■□ 3.06
FDFT1-209ENST00000525900 FBLN2P98095 1184 aa34.12■■■■□ 3.05
FDFT1-209ENST00000525900 OSCARQ8IYS5 282 aa34.12■■■■□ 3.05
FDFT1-209ENST00000525900 ERICH3Q5RHP9 1530 aa34.04■■■■□ 3.04
FDFT1-209ENST00000525900 SYNJ2O15056 1496 aa34.04■■■■□ 3.04
FDFT1-209ENST00000525900 TRIM41Q8WV44 630 aa34.03■■■■□ 3.04
FDFT1-209ENST00000525900 ADAMTS12P58397 1594 aa34.02■■■■□ 3.04
FDFT1-209ENST00000525900 CHMP7Q8WUX9 453 aaPredicted RBP34■■■■□ 3.03
FDFT1-209ENST00000525900 KIF27Q86VH2 1401 aa33.99■■■■□ 3.03
FDFT1-209ENST00000525900 FHAD1B1AJZ9 1412 aa33.9■■■■□ 3.02
FDFT1-209ENST00000525900 RUSC2Q8N2Y8 1516 aa33.89■■■■□ 3.02
FDFT1-209ENST00000525900 IGF1RP08069 1367 aa33.88■■■■□ 3.01
FDFT1-209ENST00000525900 GRIN2AQ12879 1464 aa33.87■■■■□ 3.01
FDFT1-209ENST00000525900 CLASP1Q7Z460 1538 aa33.79■■■■□ 3
FDFT1-209ENST00000525900 CUL7Q14999 1698 aa33.78■■■■□ 3
FDFT1-209ENST00000525900 CHIC1Q5VXU3 224 aa33.77■■■■□ 3
FDFT1-209ENST00000525900 CEP170Q5SW79 1584 aa33.76■■■□□ 2.99
FDFT1-209ENST00000525900 NUP160Q12769 1436 aa33.69■■■□□ 2.98
FDFT1-209ENST00000525900 RIMBP3CA6NJZ7 1639 aa33.68■■■□□ 2.98
FDFT1-209ENST00000525900 RIMBP3BA6NNM3 1639 aa33.68■■■□□ 2.98
FDFT1-209ENST00000525900 RIMBP3Q9UFD9 1639 aa33.68■■■□□ 2.98
FDFT1-209ENST00000525900 CARMIL1Q5VZK9 1371 aa33.67■■■□□ 2.98
FDFT1-209ENST00000525900 ARHGEF11O15085 1522 aa33.65■■■□□ 2.98
FDFT1-209ENST00000525900 RAPGEF2Q9Y4G8 1499 aa33.48■■■□□ 2.95
FDFT1-209ENST00000525900 SHROOM2Q13796 1616 aa33.47■■■□□ 2.95
FDFT1-209ENST00000525900 ERCC6L2Q5T890 1561 aa33.43■■■□□ 2.94
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms