RNA–Protein interactions for RNA: ENST00000470980.1

GREB1-208, Transcript of growth regulating estrogen receptor binding 1, humanhuman

TSL 3

Gene GREB1, Length 833 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GREB1-208ENST00000470980 NISCHQ9Y2I1 1504 aa21.36■■□□□ 1.01
GREB1-208ENST00000470980 CCDC180Q9P1Z9 1646 aa19.21■□□□□ 0.67
GREB1-208ENST00000470980 ABCC9O60706 1549 aa19.13■□□□□ 0.65
GREB1-208ENST00000470980 AEBP2Q6ZN18 517 aaPredicted RBP18.29■□□□□ 0.52
GREB1-208ENST00000470980 RB1CC1Q8TDY2 1594 aa18.26■□□□□ 0.51
GREB1-208ENST00000470980 NACADO15069 1562 aa18.17■□□□□ 0.5
GREB1-208ENST00000470980 DNAJC5BQ9UF47 199 aa18.03■□□□□ 0.48
GREB1-208ENST00000470980 MYO15BQ96JP2 1530 aa18■□□□□ 0.47
GREB1-208ENST00000470980 DCAF8L2P0C7V8 631 aa17.83■□□□□ 0.44
GREB1-208ENST00000470980 UNC13AQ9UPW8 1703 aa17.83■□□□□ 0.44
GREB1-208ENST00000470980 BICRAQ9NZM4 1560 aa17.78■□□□□ 0.44
GREB1-208ENST00000470980 PABPN1Q86U42 306 aaKnown RBP eCLIP17.77■□□□□ 0.44
GREB1-208ENST00000470980 DCAF1Q9Y4B6 1507 aa17.73■□□□□ 0.43
GREB1-208ENST00000470980 ZCCHC6Q5VYS8 1495 aaKnown RBP17.71■□□□□ 0.43
GREB1-208ENST00000470980 SHROOM4Q9ULL8 1493 aa17.61■□□□□ 0.41
GREB1-208ENST00000470980 CHIC1Q5VXU3 224 aa17.58■□□□□ 0.4
GREB1-208ENST00000470980 SCRIBQ14160 1630 aa17.37■□□□□ 0.37
GREB1-208ENST00000470980 CC2D2AQ9P2K1 1620 aa17.32■□□□□ 0.36
GREB1-208ENST00000470980 EIF4G1Q04637 1599 aaKnown RBP17.31■□□□□ 0.36
GREB1-208ENST00000470980 CECR2Q9BXF3 1484 aa17.28■□□□□ 0.36
GREB1-208ENST00000470980 NCAPD3P42695 1498 aa16.8■□□□□ 0.28
GREB1-208ENST00000470980 ATAD2BQ9ULI0 1458 aa16.69■□□□□ 0.26
GREB1-208ENST00000470980 HMGXB3Q12766 1538 aa16.65■□□□□ 0.26
GREB1-208ENST00000470980 SMARCA4P51532 1647 aa16.65■□□□□ 0.26
GREB1-208ENST00000470980 SMARCA2P51531 1590 aa16.64■□□□□ 0.25
GREB1-208ENST00000470980 DNAJC5Q9H3Z4 198 aa16.62■□□□□ 0.25
GREB1-208ENST00000470980 CUX2O14529 1486 aa16.6■□□□□ 0.25
GREB1-208ENST00000470980 PEG3Q9GZU2 1588 aa16.58■□□□□ 0.24
GREB1-208ENST00000470980 BAZ1AQ9NRL2 1556 aaPredicted RBP16.58■□□□□ 0.24
GREB1-208ENST00000470980 SUPT5HO00267 1087 aaKnown RBP16.53■□□□□ 0.24
GREB1-208ENST00000470980 ERCC6Q03468 1493 aa16.5■□□□□ 0.23
GREB1-208ENST00000470980 BAZ1BQ9UIG0 1483 aaKnown RBP16.48■□□□□ 0.23
GREB1-208ENST00000470980 NESP48681 1621 aa16.45■□□□□ 0.22
GREB1-208ENST00000470980 MROH2BQ7Z745 1585 aa16.43■□□□□ 0.22
GREB1-208ENST00000470980 LAMC3Q9Y6N6 1575 aa16.39■□□□□ 0.21
GREB1-208ENST00000470980 THOC2Q8NI27 1593 aaKnown RBP16.34■□□□□ 0.21
GREB1-208ENST00000470980 RSF1Q96T23 1441 aaPredicted RBP16.33■□□□□ 0.2
GREB1-208ENST00000470980 PDS5BQ9NTI5 1447 aa16.28■□□□□ 0.2
GREB1-208ENST00000470980 CADPSQ9ULU8 1353 aa16.25■□□□□ 0.19
GREB1-208ENST00000470980 KIF21AQ7Z4S6 1674 aa16.22■□□□□ 0.19
GREB1-208ENST00000470980 WIZO95785 1651 aa16.2■□□□□ 0.18
GREB1-208ENST00000470980 MRC2Q9UBG0 1479 aa16.13■□□□□ 0.17
GREB1-208ENST00000470980 WDR62O43379 1518 aa16.13■□□□□ 0.17
GREB1-208ENST00000470980 CFTRP13569 1480 aa16.08■□□□□ 0.16
GREB1-208ENST00000470980 CEP164Q9UPV0 1460 aa16.03■□□□□ 0.16
GREB1-208ENST00000470980 TOP2AP11388 1531 aaKnown RBP16.03■□□□□ 0.16
GREB1-208ENST00000470980 FANCD2Q9BXW9 1451 aa16.02■□□□□ 0.15
GREB1-208ENST00000470980 URB2Q14146 1524 aaKnown RBP15.9■□□□□ 0.14
GREB1-208ENST00000470980 PRDM2Q13029 1718 aa15.86■□□□□ 0.13
GREB1-208ENST00000470980 CCDC88BA6NC98 1476 aa15.84■□□□□ 0.13
GREB1-208ENST00000470980 OSCARQ8IYS5 282 aa15.78■□□□□ 0.12
GREB1-208ENST00000470980 IFT140Q96RY7 1462 aa15.75■□□□□ 0.11
GREB1-208ENST00000470980 ABCC8Q09428 1581 aa15.73■□□□□ 0.11
GREB1-208ENST00000470980 TOPBP1Q92547 1522 aa15.73■□□□□ 0.11
GREB1-208ENST00000470980 TRIM41Q8WV44 630 aa15.7■□□□□ 0.1
GREB1-208ENST00000470980 ZNF608Q9ULD9 1512 aaPredicted RBP15.69■□□□□ 0.1
GREB1-208ENST00000470980 DNMBPQ6XZF7 1577 aa15.67■□□□□ 0.1
GREB1-208ENST00000470980 TARBP1Q13395 1621 aaKnown RBP15.62■□□□□ 0.09
GREB1-208ENST00000470980 EIF4G3O43432 1585 aaKnown RBP15.61■□□□□ 0.09
GREB1-208ENST00000470980 RIMBP3CA6NJZ7 1639 aa15.57■□□□□ 0.08
GREB1-208ENST00000470980 RIMBP3BA6NNM3 1639 aa15.57■□□□□ 0.08
GREB1-208ENST00000470980 RIMBP3Q9UFD9 1639 aa15.57■□□□□ 0.08
GREB1-208ENST00000470980 POLA1P09884 1462 aaPredicted RBP15.56■□□□□ 0.08
GREB1-208ENST00000470980 ARHGEF11O15085 1522 aa15.54■□□□□ 0.08
GREB1-208ENST00000470980 AQRO60306 1485 aaKnown RBP eCLIP15.53■□□□□ 0.083e-8■■■■■ 31.5
GREB1-208ENST00000470980 SENP3Q9H4L4 574 aaPredicted RBP15.51■□□□□ 0.07
GREB1-208ENST00000470980 WDR97A6NE52 1622 aa15.5■□□□□ 0.07
GREB1-208ENST00000470980 CHD1O14646 1710 aa15.47■□□□□ 0.07
GREB1-208ENST00000470980 SOGA1O94964 1423 aa15.47■□□□□ 0.07
GREB1-208ENST00000470980 PHF23Q9BUL5 403 aaPredicted RBP15.47■□□□□ 0.07
GREB1-208ENST00000470980 RAD54L2Q9Y4B4 1467 aa15.46■□□□□ 0.07
GREB1-208ENST00000470980 FGD5Q6ZNL6 1462 aa15.44■□□□□ 0.06
GREB1-208ENST00000470980 CUX1P39880 1505 aa15.43■□□□□ 0.06
GREB1-208ENST00000470980 TDRD9Q8NDG6 1382 aaKnown RBP15.42■□□□□ 0.06
GREB1-208ENST00000470980 WRNQ14191 1432 aaPredicted RBP eCLIP15.39■□□□□ 0.05
GREB1-208ENST00000470980 ARAP1Q96P48 1450 aa15.39■□□□□ 0.05
GREB1-208ENST00000470980 MAGI1Q96QZ7 1491 aaPredicted RBP15.39■□□□□ 0.05
GREB1-208ENST00000470980 CLASP1Q7Z460 1538 aa15.38■□□□□ 0.05
GREB1-208ENST00000470980 SNAPC4Q5SXM2 1469 aa15.37■□□□□ 0.05
GREB1-208ENST00000470980 GRIN2BQ13224 1484 aa15.36■□□□□ 0.05
GREB1-208ENST00000470980 CYB5RLQ6IPT4 315 aa15.35■□□□□ 0.05
GREB1-208ENST00000470980 FBLN2P98095 1184 aa15.33■□□□□ 0.04
GREB1-208ENST00000470980 SYNJ2O15056 1496 aa15.33■□□□□ 0.04
GREB1-208ENST00000470980 ABCA10Q8WWZ4 1543 aa15.32■□□□□ 0.04
GREB1-208ENST00000470980 SYNJ1O43426 1573 aa15.32■□□□□ 0.04
GREB1-208ENST00000470980 GAPVD1Q14C86 1478 aa15.29■□□□□ 0.04
GREB1-208ENST00000470980 CHMP7Q8WUX9 453 aaPredicted RBP15.29■□□□□ 0.04
GREB1-208ENST00000470980 FAM9AQ8IZU1 332 aaPredicted RBP15.28■□□□□ 0.04
GREB1-208ENST00000470980 ABCA5Q8WWZ7 1642 aa15.28■□□□□ 0.04
GREB1-208ENST00000470980 PBRM1Q86U86 1689 aa15.26■□□□□ 0.03
GREB1-208ENST00000470980 TOP2BQ02880 1626 aa15.25■□□□□ 0.03
GREB1-208ENST00000470980 BIVM-ERCC5R4GMW8 1640 aa15.22■□□□□ 0.03
GREB1-208ENST00000470980 GRIN2AQ12879 1464 aa15.17■□□□□ 0.02
GREB1-208ENST00000470980 LOC105371045A0A1W2PR82 267 aa15.17■□□□□ 0.02
GREB1-208ENST00000470980 NUP160Q12769 1436 aa15.16■□□□□ 0.02
GREB1-208ENST00000470980 ADAMTS12P58397 1594 aa15.15■□□□□ 0.02
GREB1-208ENST00000470980 TRHP20396 242 aaPredicted RBP15.14■□□□□ 0.01
GREB1-208ENST00000470980 EEA1Q15075 1411 aa15.14■□□□□ 0.01
GREB1-208ENST00000470980 ERICH3Q5RHP9 1530 aa15.12■□□□□ 0.01
GREB1-208ENST00000470980 FHAD1B1AJZ9 1412 aa15.11■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms