RNA–Protein interactions for RNA: ENST00000443614.6

FDFT1-202, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

TSL 2 BASIC

Gene FDFT1, Length 1,393 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-202ENST00000443614 NISCHQ9Y2I1 1504 aa37.53■■■■□ 3.6
FDFT1-202ENST00000443614 CCDC180Q9P1Z9 1646 aa33.36■■■□□ 2.93
FDFT1-202ENST00000443614 ABCC9O60706 1549 aa33■■■□□ 2.87
FDFT1-202ENST00000443614 DCAF8L2P0C7V8 631 aa31.56■■■□□ 2.64
FDFT1-202ENST00000443614 RB1CC1Q8TDY2 1594 aa31.53■■■□□ 2.64
FDFT1-202ENST00000443614 NACADO15069 1562 aa31.44■■■□□ 2.62
FDFT1-202ENST00000443614 ZCCHC6Q5VYS8 1495 aaKnown RBP31.2■■■□□ 2.58
FDFT1-202ENST00000443614 MYO15BQ96JP2 1530 aa31.14■■■□□ 2.58
FDFT1-202ENST00000443614 DCAF1Q9Y4B6 1507 aa30.96■■■□□ 2.55
FDFT1-202ENST00000443614 UNC13AQ9UPW8 1703 aa30.9■■■□□ 2.54
FDFT1-202ENST00000443614 PABPN1Q86U42 306 aaKnown RBP eCLIP30.87■■■□□ 2.53
FDFT1-202ENST00000443614 BICRAQ9NZM4 1560 aa30.69■■■□□ 2.5
FDFT1-202ENST00000443614 DNAJC5BQ9UF47 199 aa30.61■■■□□ 2.49
FDFT1-202ENST00000443614 SCRIBQ14160 1630 aa30.53■■■□□ 2.48
FDFT1-202ENST00000443614 SHROOM4Q9ULL8 1493 aa30.15■■■□□ 2.42
FDFT1-202ENST00000443614 EIF4G1Q04637 1599 aaKnown RBP29.84■■■□□ 2.37
FDFT1-202ENST00000443614 CC2D2AQ9P2K1 1620 aa29.79■■■□□ 2.36
FDFT1-202ENST00000443614 CECR2Q9BXF3 1484 aa29.62■■■□□ 2.33
FDFT1-202ENST00000443614 SMARCA4P51532 1647 aa29.15■■■□□ 2.26
FDFT1-202ENST00000443614 ATAD2BQ9ULI0 1458 aa29.07■■■□□ 2.24
FDFT1-202ENST00000443614 NCAPD3P42695 1498 aa29.06■■■□□ 2.24
FDFT1-202ENST00000443614 BAZ1AQ9NRL2 1556 aaPredicted RBP29.04■■■□□ 2.24
FDFT1-202ENST00000443614 MROH2BQ7Z745 1585 aa28.98■■■□□ 2.23
FDFT1-202ENST00000443614 SMARCA2P51531 1590 aa28.95■■■□□ 2.22
FDFT1-202ENST00000443614 HMGXB3Q12766 1538 aa28.84■■■□□ 2.21
FDFT1-202ENST00000443614 PEG3Q9GZU2 1588 aa28.82■■■□□ 2.2
FDFT1-202ENST00000443614 BAZ1BQ9UIG0 1483 aaKnown RBP28.78■■■□□ 2.2
FDFT1-202ENST00000443614 WIZO95785 1651 aa28.64■■■□□ 2.18
FDFT1-202ENST00000443614 RSF1Q96T23 1441 aaPredicted RBP28.56■■■□□ 2.16
FDFT1-202ENST00000443614 NESP48681 1621 aa28.53■■■□□ 2.16
FDFT1-202ENST00000443614 ERCC6Q03468 1493 aa28.37■■■□□ 2.13
FDFT1-202ENST00000443614 LAMC3Q9Y6N6 1575 aa28.28■■■□□ 2.12
FDFT1-202ENST00000443614 TOP2AP11388 1531 aaKnown RBP28.25■■■□□ 2.11
FDFT1-202ENST00000443614 CADPSQ9ULU8 1353 aa28.22■■■□□ 2.11
FDFT1-202ENST00000443614 CUX2O14529 1486 aa28.12■■■□□ 2.09
FDFT1-202ENST00000443614 KIF21AQ7Z4S6 1674 aa28.11■■■□□ 2.09
FDFT1-202ENST00000443614 PDS5BQ9NTI5 1447 aa28.11■■■□□ 2.09
FDFT1-202ENST00000443614 DNAJC5Q9H3Z4 198 aa28.05■■■□□ 2.08
FDFT1-202ENST00000443614 THOC2Q8NI27 1593 aaKnown RBP28.04■■■□□ 2.08
FDFT1-202ENST00000443614 CCDC88BA6NC98 1476 aa28■■■□□ 2.07
FDFT1-202ENST00000443614 CFTRP13569 1480 aa28■■■□□ 2.07
FDFT1-202ENST00000443614 FANCD2Q9BXW9 1451 aa27.89■■■□□ 2.05
FDFT1-202ENST00000443614 MRC2Q9UBG0 1479 aa27.85■■■□□ 2.05
FDFT1-202ENST00000443614 CEP164Q9UPV0 1460 aa27.85■■■□□ 2.05
FDFT1-202ENST00000443614 WDR62O43379 1518 aa27.75■■■□□ 2.03
FDFT1-202ENST00000443614 SUPT5HO00267 1087 aaKnown RBP27.74■■■□□ 2.03
FDFT1-202ENST00000443614 PRDM2Q13029 1718 aa27.7■■■□□ 2.02
FDFT1-202ENST00000443614 URB2Q14146 1524 aaKnown RBP27.66■■■□□ 2.02
FDFT1-202ENST00000443614 TOPBP1Q92547 1522 aa27.43■■□□□ 1.98
FDFT1-202ENST00000443614 DNMBPQ6XZF7 1577 aa27.34■■□□□ 1.97
FDFT1-202ENST00000443614 ABCC8Q09428 1581 aa27.32■■□□□ 1.96
FDFT1-202ENST00000443614 IFT140Q96RY7 1462 aa27.27■■□□□ 1.96
FDFT1-202ENST00000443614 ZNF608Q9ULD9 1512 aaPredicted RBP27.26■■□□□ 1.95
FDFT1-202ENST00000443614 POLA1P09884 1462 aaPredicted RBP27.19■■□□□ 1.94
FDFT1-202ENST00000443614 CUX1P39880 1505 aa27.17■■□□□ 1.94
FDFT1-202ENST00000443614 TARBP1Q13395 1621 aaKnown RBP27.15■■□□□ 1.94
FDFT1-202ENST00000443614 RAD54L2Q9Y4B4 1467 aa27.13■■□□□ 1.93
FDFT1-202ENST00000443614 FGD5Q6ZNL6 1462 aa27.09■■□□□ 1.93
FDFT1-202ENST00000443614 SOGA1O94964 1423 aa27.09■■□□□ 1.93
FDFT1-202ENST00000443614 AQRO60306 1485 aaKnown RBP eCLIP27.08■■□□□ 1.933e-7■■■■□ 23
FDFT1-202ENST00000443614 EIF4G3O43432 1585 aaKnown RBP27.06■■□□□ 1.92
FDFT1-202ENST00000443614 TDRD9Q8NDG6 1382 aaKnown RBP27.01■■□□□ 1.91
FDFT1-202ENST00000443614 OSCARQ8IYS5 282 aa27■■□□□ 1.91
FDFT1-202ENST00000443614 WRNQ14191 1432 aaPredicted RBP eCLIP26.88■■□□□ 1.89
FDFT1-202ENST00000443614 SYNJ1O43426 1573 aa26.86■■□□□ 1.89
FDFT1-202ENST00000443614 WDR97A6NE52 1622 aa26.84■■□□□ 1.89
FDFT1-202ENST00000443614 TOP2BQ02880 1626 aa26.82■■□□□ 1.88
FDFT1-202ENST00000443614 BIVM-ERCC5R4GMW8 1640 aa26.82■■□□□ 1.88
FDFT1-202ENST00000443614 FBLN2P98095 1184 aa26.8■■□□□ 1.88
FDFT1-202ENST00000443614 ABCA10Q8WWZ4 1543 aa26.79■■□□□ 1.88
FDFT1-202ENST00000443614 CHD1O14646 1710 aa26.78■■□□□ 1.88
FDFT1-202ENST00000443614 SNAPC4Q5SXM2 1469 aa26.77■■□□□ 1.88
FDFT1-202ENST00000443614 GRIN2BQ13224 1484 aa26.75■■□□□ 1.87
FDFT1-202ENST00000443614 GAPVD1Q14C86 1478 aa26.74■■□□□ 1.87
FDFT1-202ENST00000443614 ABCA5Q8WWZ7 1642 aa26.69■■□□□ 1.86
FDFT1-202ENST00000443614 PBRM1Q86U86 1689 aa26.67■■□□□ 1.86
FDFT1-202ENST00000443614 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
FDFT1-202ENST00000443614 CHMP7Q8WUX9 453 aaPredicted RBP26.66■■□□□ 1.86
FDFT1-202ENST00000443614 TRIM41Q8WV44 630 aa26.66■■□□□ 1.86
FDFT1-202ENST00000443614 SYNJ2O15056 1496 aa26.6■■□□□ 1.85
FDFT1-202ENST00000443614 RIMBP3CA6NJZ7 1639 aa26.58■■□□□ 1.85
FDFT1-202ENST00000443614 RIMBP3BA6NNM3 1639 aa26.58■■□□□ 1.85
FDFT1-202ENST00000443614 RIMBP3Q9UFD9 1639 aa26.58■■□□□ 1.85
FDFT1-202ENST00000443614 ARHGEF11O15085 1522 aa26.54■■□□□ 1.84
FDFT1-202ENST00000443614 CLASP1Q7Z460 1538 aa26.48■■□□□ 1.83
FDFT1-202ENST00000443614 ADAMTS12P58397 1594 aa26.45■■□□□ 1.82
FDFT1-202ENST00000443614 ERICH3Q5RHP9 1530 aa26.44■■□□□ 1.82
FDFT1-202ENST00000443614 GRIN2AQ12879 1464 aa26.41■■□□□ 1.82
FDFT1-202ENST00000443614 FHAD1B1AJZ9 1412 aa26.41■■□□□ 1.82
FDFT1-202ENST00000443614 CYB5RLQ6IPT4 315 aa26.39■■□□□ 1.82
FDFT1-202ENST00000443614 ARAP1Q96P48 1450 aa26.35■■□□□ 1.81
FDFT1-202ENST00000443614 CEP170Q5SW79 1584 aa26.33■■□□□ 1.8
FDFT1-202ENST00000443614 IGF1RP08069 1367 aa26.32■■□□□ 1.8
FDFT1-202ENST00000443614 NUP160Q12769 1436 aa26.31■■□□□ 1.8
FDFT1-202ENST00000443614 KIF27Q86VH2 1401 aa26.31■■□□□ 1.8
FDFT1-202ENST00000443614 ERCC6L2Q5T890 1561 aa26.19■■□□□ 1.78
FDFT1-202ENST00000443614 RUSC2Q8N2Y8 1516 aa26.17■■□□□ 1.78
FDFT1-202ENST00000443614 CARMIL1Q5VZK9 1371 aa26.13■■□□□ 1.77
FDFT1-202ENST00000443614 CUL7Q14999 1698 aa26.13■■□□□ 1.77
FDFT1-202ENST00000443614 SHROOM2Q13796 1616 aa26.12■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms