RNA–Protein interactions for RNA: ENST00000618539.4

FDFT1-224, Transcript of farnesyl-diphosphate farnesyltransferase 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FDFT1, Length 2,660 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1-224ENST00000618539 NISCHQ9Y2I1 1504 aa33.97■■■■□ 3.03
FDFT1-224ENST00000618539 CCDC180Q9P1Z9 1646 aa30.02■■■□□ 2.4
FDFT1-224ENST00000618539 ABCC9O60706 1549 aa28.5■■■□□ 2.15
FDFT1-224ENST00000618539 ZCCHC6Q5VYS8 1495 aaKnown RBP28.47■■■□□ 2.15
FDFT1-224ENST00000618539 DCAF1Q9Y4B6 1507 aa28.23■■■□□ 2.11
FDFT1-224ENST00000618539 MYO15BQ96JP2 1530 aa28.11■■■□□ 2.09
FDFT1-224ENST00000618539 NACADO15069 1562 aa27.99■■■□□ 2.07
FDFT1-224ENST00000618539 RB1CC1Q8TDY2 1594 aa27.84■■■□□ 2.05
FDFT1-224ENST00000618539 DCAF8L2P0C7V8 631 aa27.83■■■□□ 2.05
FDFT1-224ENST00000618539 UNC13AQ9UPW8 1703 aa27.31■■□□□ 1.96
FDFT1-224ENST00000618539 SCRIBQ14160 1630 aa27.3■■□□□ 1.96
FDFT1-224ENST00000618539 SHROOM4Q9ULL8 1493 aa27.25■■□□□ 1.95
FDFT1-224ENST00000618539 BICRAQ9NZM4 1560 aa27■■□□□ 1.91
FDFT1-224ENST00000618539 PABPN1Q86U42 306 aaKnown RBP eCLIP26.67■■□□□ 1.86
FDFT1-224ENST00000618539 HRCP23327 699 aa26.53■■□□□ 1.84
FDFT1-224ENST00000618539 CECR2Q9BXF3 1484 aa26.33■■□□□ 1.81
FDFT1-224ENST00000618539 BAZ1AQ9NRL2 1556 aaPredicted RBP26.29■■□□□ 1.8
FDFT1-224ENST00000618539 PELP1Q8IZL8 1130 aaKnown RBP26.27■■□□□ 1.8
FDFT1-224ENST00000618539 SMARCA4P51532 1647 aa26.24■■□□□ 1.79
FDFT1-224ENST00000618539 EIF4G1Q04637 1599 aaKnown RBP26.2■■□□□ 1.78
FDFT1-224ENST00000618539 SUPT5HO00267 1087 aaKnown RBP26.18■■□□□ 1.78
FDFT1-224ENST00000618539 MROH2BQ7Z745 1585 aa26.16■■□□□ 1.78
FDFT1-224ENST00000618539 RSF1Q96T23 1441 aaPredicted RBP26.1■■□□□ 1.77
FDFT1-224ENST00000618539 PEG3Q9GZU2 1588 aa26.04■■□□□ 1.76
FDFT1-224ENST00000618539 PPARGC1BQ86YN6 1023 aaKnown RBP26■■□□□ 1.75
FDFT1-224ENST00000618539 WIZO95785 1651 aa25.94■■□□□ 1.74
FDFT1-224ENST00000618539 SMARCA2P51531 1590 aa25.92■■□□□ 1.74
FDFT1-224ENST00000618539 CC2D2AQ9P2K1 1620 aa25.92■■□□□ 1.74
FDFT1-224ENST00000618539 ATAD2BQ9ULI0 1458 aa25.88■■□□□ 1.73
FDFT1-224ENST00000618539 NCAPD3P42695 1498 aa25.79■■□□□ 1.72
FDFT1-224ENST00000618539 HMGXB3Q12766 1538 aa25.77■■□□□ 1.72
FDFT1-224ENST00000618539 PCGF6Q9BYE7 350 aa25.73■■□□□ 1.71
FDFT1-224ENST00000618539 TOP2AP11388 1531 aaKnown RBP25.73■■□□□ 1.71
FDFT1-224ENST00000618539 MYT1Q01538 1121 aa25.72■■□□□ 1.71
FDFT1-224ENST00000618539 BAZ1BQ9UIG0 1483 aaKnown RBP25.68■■□□□ 1.7
FDFT1-224ENST00000618539 DNAJC5BQ9UF47 199 aa25.52■■□□□ 1.68
FDFT1-224ENST00000618539 SCAF1Q9H7N4 1312 aaKnown RBP25.4■■□□□ 1.66
FDFT1-224ENST00000618539 CCDC88BA6NC98 1476 aa25.37■■□□□ 1.65
FDFT1-224ENST00000618539 PRDM2Q13029 1718 aa25.08■■□□□ 1.6
FDFT1-224ENST00000618539 CFTRP13569 1480 aa25.07■■□□□ 1.6
FDFT1-224ENST00000618539 LAMC3Q9Y6N6 1575 aa25.03■■□□□ 1.6
FDFT1-224ENST00000618539 CADPSQ9ULU8 1353 aa25.02■■□□□ 1.6
FDFT1-224ENST00000618539 CHIC1Q5VXU3 224 aa25.02■■□□□ 1.6
FDFT1-224ENST00000618539 NESP48681 1621 aa24.9■■□□□ 1.58
FDFT1-224ENST00000618539 PDS5BQ9NTI5 1447 aa24.76■■□□□ 1.55
FDFT1-224ENST00000618539 TRIM26Q12899 539 aaPredicted RBP24.74■■□□□ 1.55
FDFT1-224ENST00000618539 FANCD2Q9BXW9 1451 aa24.74■■□□□ 1.55
FDFT1-224ENST00000618539 KIF21AQ7Z4S6 1674 aa24.73■■□□□ 1.55
FDFT1-224ENST00000618539 ZEB1P37275 1124 aaPredicted RBP24.68■■□□□ 1.54
FDFT1-224ENST00000618539 CEP164Q9UPV0 1460 aa24.65■■□□□ 1.54
FDFT1-224ENST00000618539 TTBK1Q5TCY1 1321 aaPredicted RBP24.64■■□□□ 1.54
FDFT1-224ENST00000618539 ABCC8Q09428 1581 aa24.63■■□□□ 1.53
FDFT1-224ENST00000618539 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
FDFT1-224ENST00000618539 WRNQ14191 1432 aaPredicted RBP eCLIP24.56■■□□□ 1.52
FDFT1-224ENST00000618539 BIVM-ERCC5R4GMW8 1640 aa24.56■■□□□ 1.52
FDFT1-224ENST00000618539 TOP2BQ02880 1626 aa24.53■■□□□ 1.52
FDFT1-224ENST00000618539 SYNJ1O43426 1573 aa24.52■■□□□ 1.52
FDFT1-224ENST00000618539 LOC105371045A0A1W2PR82 267 aa24.52■■□□□ 1.52
FDFT1-224ENST00000618539 CUX1P39880 1505 aa24.52■■□□□ 1.52
FDFT1-224ENST00000618539 NEUROD1Q13562 356 aa24.52■■□□□ 1.52
FDFT1-224ENST00000618539 TRIM41Q8WV44 630 aa24.52■■□□□ 1.52
FDFT1-224ENST00000618539 ERCC6Q03468 1493 aa24.51■■□□□ 1.51
FDFT1-224ENST00000618539 DNMBPQ6XZF7 1577 aa24.51■■□□□ 1.51
FDFT1-224ENST00000618539 THOC2Q8NI27 1593 aaKnown RBP24.49■■□□□ 1.51
FDFT1-224ENST00000618539 MRC2Q9UBG0 1479 aa24.49■■□□□ 1.51
FDFT1-224ENST00000618539 URB2Q14146 1524 aaKnown RBP24.48■■□□□ 1.51
FDFT1-224ENST00000618539 WDR62O43379 1518 aa24.45■■□□□ 1.5
FDFT1-224ENST00000618539 TOPBP1Q92547 1522 aa24.44■■□□□ 1.5
FDFT1-224ENST00000618539 GTF3C3Q9Y5Q9 886 aa24.43■■□□□ 1.5
FDFT1-224ENST00000618539 FGD5Q6ZNL6 1462 aa24.3■■□□□ 1.48
FDFT1-224ENST00000618539 POLA1P09884 1462 aaPredicted RBP24.28■■□□□ 1.48
FDFT1-224ENST00000618539 FAM9AQ8IZU1 332 aaPredicted RBP24.21■■□□□ 1.47
FDFT1-224ENST00000618539 WDR97A6NE52 1622 aa24.21■■□□□ 1.47
FDFT1-224ENST00000618539 PRKCSHP14314 528 aaPredicted RBP24.19■■□□□ 1.46
FDFT1-224ENST00000618539 TARBP1Q13395 1621 aaKnown RBP24.19■■□□□ 1.46
FDFT1-224ENST00000618539 CUX2O14529 1486 aa24.18■■□□□ 1.46
FDFT1-224ENST00000618539 CENPBP07199 599 aaPredicted RBP24.16■■□□□ 1.46
FDFT1-224ENST00000618539 ABCA10Q8WWZ4 1543 aa24.15■■□□□ 1.46
FDFT1-224ENST00000618539 SOGA1O94964 1423 aa24.14■■□□□ 1.45
FDFT1-224ENST00000618539 IFT140Q96RY7 1462 aa24.13■■□□□ 1.45
FDFT1-224ENST00000618539 RAD54L2Q9Y4B4 1467 aa24.11■■□□□ 1.45
FDFT1-224ENST00000618539 EEA1Q15075 1411 aa24.04■■□□□ 1.44
FDFT1-224ENST00000618539 ABCA5Q8WWZ7 1642 aa24.04■■□□□ 1.44
FDFT1-224ENST00000618539 KIF27Q86VH2 1401 aa24■■□□□ 1.43
FDFT1-224ENST00000618539 EHMT2Q96KQ7 1210 aa23.98■■□□□ 1.43
FDFT1-224ENST00000618539 RUSC2Q8N2Y8 1516 aa23.97■■□□□ 1.43
FDFT1-224ENST00000618539 EIF4G3O43432 1585 aaKnown RBP23.93■■□□□ 1.42
FDFT1-224ENST00000618539 ZNF608Q9ULD9 1512 aaPredicted RBP23.92■■□□□ 1.42
FDFT1-224ENST00000618539 PBRM1Q86U86 1689 aa23.92■■□□□ 1.42
FDFT1-224ENST00000618539 GAPVD1Q14C86 1478 aa23.9■■□□□ 1.42
FDFT1-224ENST00000618539 DIEXFQ68CQ4 756 aaKnown RBP23.89■■□□□ 1.41
FDFT1-224ENST00000618539 ERICH3Q5RHP9 1530 aa23.89■■□□□ 1.41
FDFT1-224ENST00000618539 TDRD9Q8NDG6 1382 aaKnown RBP23.88■■□□□ 1.41
FDFT1-224ENST00000618539 AQRO60306 1485 aaKnown RBP eCLIP23.84■■□□□ 1.413e-7■■■■□ 23
FDFT1-224ENST00000618539 BCL11AQ9H165 835 aa23.84■■□□□ 1.41
FDFT1-224ENST00000618539 CUL7Q14999 1698 aa23.83■■□□□ 1.4
FDFT1-224ENST00000618539 GRIN2BQ13224 1484 aa23.81■■□□□ 1.4
FDFT1-224ENST00000618539 IGF1RP08069 1367 aa23.81■■□□□ 1.4
FDFT1-224ENST00000618539 CSRNP3Q8WYN3 585 aa23.8■■□□□ 1.4
FDFT1-224ENST00000618539 KIF21BO75037 1637 aa23.78■■□□□ 1.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms