RNA–Protein interactions for RNA: ENST00000415380.6

SCARB1-203, Transcript of scavenger receptor class B member 1, humanhuman

TSL 2 BASIC

Gene SCARB1, Length 2,731 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-203ENST00000415380 NISCHQ9Y2I1 1504 aa36.71■■■■□ 3.47
SCARB1-203ENST00000415380 SHROOM4Q9ULL8 1493 aa31.49■■■□□ 2.63
SCARB1-203ENST00000415380 ZCCHC6Q5VYS8 1495 aaKnown RBP31.12■■■□□ 2.57
SCARB1-203ENST00000415380 CCDC180Q9P1Z9 1646 aa31.08■■■□□ 2.57
SCARB1-203ENST00000415380 SUPT5HO00267 1087 aaKnown RBP31■■■□□ 2.55
SCARB1-203ENST00000415380 DCAF8L2P0C7V8 631 aa30.32■■■□□ 2.44
SCARB1-203ENST00000415380 CHIC1Q5VXU3 224 aa30.29■■■□□ 2.44
SCARB1-203ENST00000415380 MYO15BQ96JP2 1530 aa30.27■■■□□ 2.44
SCARB1-203ENST00000415380 DCAF1Q9Y4B6 1507 aa30.12■■■□□ 2.41
SCARB1-203ENST00000415380 HRCP23327 699 aa29.83■■■□□ 2.37
SCARB1-203ENST00000415380 PCGF6Q9BYE7 350 aa29.61■■■□□ 2.33
SCARB1-203ENST00000415380 ABCC9O60706 1549 aa29.42■■■□□ 2.3
SCARB1-203ENST00000415380 LOC105371045A0A1W2PR82 267 aa29.4■■■□□ 2.3
SCARB1-203ENST00000415380 SCRIBQ14160 1630 aa29.19■■■□□ 2.26
SCARB1-203ENST00000415380 RSF1Q96T23 1441 aaPredicted RBP29.16■■■□□ 2.26
SCARB1-203ENST00000415380 PPARGC1BQ86YN6 1023 aaKnown RBP29.16■■■□□ 2.26
SCARB1-203ENST00000415380 TRIM26Q12899 539 aaPredicted RBP29■■■□□ 2.23
SCARB1-203ENST00000415380 RB1CC1Q8TDY2 1594 aa28.91■■■□□ 2.22
SCARB1-203ENST00000415380 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
SCARB1-203ENST00000415380 NACADO15069 1562 aa28.67■■■□□ 2.18
SCARB1-203ENST00000415380 FAM9AQ8IZU1 332 aaPredicted RBP28.63■■■□□ 2.17
SCARB1-203ENST00000415380 CECR2Q9BXF3 1484 aa28.63■■■□□ 2.17
SCARB1-203ENST00000415380 MROH2BQ7Z745 1585 aa28.56■■■□□ 2.16
SCARB1-203ENST00000415380 ZEB1P37275 1124 aaPredicted RBP28.48■■■□□ 2.15
SCARB1-203ENST00000415380 WIZO95785 1651 aa28.43■■■□□ 2.14
SCARB1-203ENST00000415380 EHMT2Q96KQ7 1210 aa28.37■■■□□ 2.13
SCARB1-203ENST00000415380 BAZ1AQ9NRL2 1556 aaPredicted RBP28.28■■■□□ 2.12
SCARB1-203ENST00000415380 EIF4G1Q04637 1599 aaKnown RBP28.19■■■□□ 2.1
SCARB1-203ENST00000415380 TOP2AP11388 1531 aaKnown RBP27.98■■■□□ 2.07
SCARB1-203ENST00000415380 SMARCA4P51532 1647 aa27.91■■■□□ 2.06
SCARB1-203ENST00000415380 ABCC8Q09428 1581 aa27.89■■■□□ 2.06
SCARB1-203ENST00000415380 CCDC88BA6NC98 1476 aa27.87■■■□□ 2.05
SCARB1-203ENST00000415380 SMARCA2P51531 1590 aa27.85■■■□□ 2.05
SCARB1-203ENST00000415380 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.78■■■□□ 2.04
SCARB1-203ENST00000415380 UNC13AQ9UPW8 1703 aa27.75■■■□□ 2.03
SCARB1-203ENST00000415380 WRNQ14191 1432 aaPredicted RBP eCLIP27.73■■■□□ 2.03
SCARB1-203ENST00000415380 CCER1Q8TC90 406 aaPredicted RBP27.72■■■□□ 2.03
SCARB1-203ENST00000415380 SOGA1O94964 1423 aa27.68■■■□□ 2.02
SCARB1-203ENST00000415380 CEP162Q5TB80 1403 aa27.68■■■□□ 2.02
SCARB1-203ENST00000415380 SCAF1Q9H7N4 1312 aaKnown RBP27.65■■■□□ 2.02
SCARB1-203ENST00000415380 TNIKQ9UKE5 1360 aa27.62■■■□□ 2.01
SCARB1-203ENST00000415380 EEA1Q15075 1411 aa27.58■■■□□ 2
SCARB1-203ENST00000415380 TTBK1Q5TCY1 1321 aaPredicted RBP27.54■■■□□ 2
SCARB1-203ENST00000415380 RUSC2Q8N2Y8 1516 aa27.54■■■□□ 2
SCARB1-203ENST00000415380 CSRNP3Q8WYN3 585 aa27.54■■■□□ 2
SCARB1-203ENST00000415380 UBTFP17480 764 aaKnown RBP27.44■■□□□ 1.98
SCARB1-203ENST00000415380 GOLGA3Q08378 1498 aa27.41■■□□□ 1.98
SCARB1-203ENST00000415380 BICRAQ9NZM4 1560 aa27.4■■□□□ 1.98
SCARB1-203ENST00000415380 PABPN1Q86U42 306 aaKnown RBP eCLIP27.37■■□□□ 1.97
SCARB1-203ENST00000415380 PELP1Q8IZL8 1130 aaKnown RBP27.36■■□□□ 1.97
SCARB1-203ENST00000415380 PEG3Q9GZU2 1588 aa27.35■■□□□ 1.97
SCARB1-203ENST00000415380 DIEXFQ68CQ4 756 aaKnown RBP27.33■■□□□ 1.97
SCARB1-203ENST00000415380 ACIN1Q9UKV3 1341 aaKnown RBP27.3■■□□□ 1.96
SCARB1-203ENST00000415380 SYNJ1O43426 1573 aa27.25■■□□□ 1.95
SCARB1-203ENST00000415380 NEUROD1Q13562 356 aa27.24■■□□□ 1.95
SCARB1-203ENST00000415380 CEP164Q9UPV0 1460 aa27.23■■□□□ 1.95
SCARB1-203ENST00000415380 KIF21BO75037 1637 aa27.21■■□□□ 1.95
SCARB1-203ENST00000415380 ATAD2BQ9ULI0 1458 aa27.12■■□□□ 1.93
SCARB1-203ENST00000415380 CLIP1P30622 1438 aa27.11■■□□□ 1.93
SCARB1-203ENST00000415380 CENPBP07199 599 aaPredicted RBP27.09■■□□□ 1.93
SCARB1-203ENST00000415380 ZNF316A6NFI3 1004 aaPredicted RBP27.08■■□□□ 1.93
SCARB1-203ENST00000415380 BAZ1BQ9UIG0 1483 aaKnown RBP27.06■■□□□ 1.92
SCARB1-203ENST00000415380 VPS8Q8N3P4 1428 aa27.03■■□□□ 1.92
SCARB1-203ENST00000415380 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
SCARB1-203ENST00000415380 RAPGEF2Q9Y4G8 1499 aa27■■□□□ 1.91
SCARB1-203ENST00000415380 GTF3C3Q9Y5Q9 886 aa26.98■■□□□ 1.91
SCARB1-203ENST00000415380 TOP2BQ02880 1626 aa26.89■■□□□ 1.89
SCARB1-203ENST00000415380 APLP2Q06481 763 aa26.88■■□□□ 1.89
SCARB1-203ENST00000415380 RANGAP1P46060 587 aaPredicted RBP26.82■■□□□ 1.88
SCARB1-203ENST00000415380 BIVM-ERCC5R4GMW8 1640 aa26.79■■□□□ 1.88
SCARB1-203ENST00000415380 MIER1Q8N108 512 aa26.72■■□□□ 1.87
SCARB1-203ENST00000415380 ERICH3Q5RHP9 1530 aa26.72■■□□□ 1.87
SCARB1-203ENST00000415380 PRXQ9BXM0 1461 aa26.7■■□□□ 1.87
SCARB1-203ENST00000415380 YTHDC1Q96MU7 727 aaKnown RBP26.7■■□□□ 1.86
SCARB1-203ENST00000415380 ARAP1Q96P48 1450 aa26.66■■□□□ 1.86
SCARB1-203ENST00000415380 CUX1P39880 1505 aa26.57■■□□□ 1.84
SCARB1-203ENST00000415380 HMGXB3Q12766 1538 aa26.55■■□□□ 1.84
SCARB1-203ENST00000415380 CLSPNQ9HAW4 1339 aa26.55■■□□□ 1.84
SCARB1-203ENST00000415380 DHX57Q6P158 1386 aaKnown RBP26.54■■□□□ 1.84
SCARB1-203ENST00000415380 KANK4Q5T7N3 995 aaPredicted RBP26.54■■□□□ 1.84
SCARB1-203ENST00000415380 NCAPD3P42695 1498 aa26.54■■□□□ 1.84
SCARB1-203ENST00000415380 KIF27Q86VH2 1401 aa26.5■■□□□ 1.83
SCARB1-203ENST00000415380 RRBP1Q9P2E9 1410 aaKnown RBP26.45■■□□□ 1.82
SCARB1-203ENST00000415380 CFTRP13569 1480 aa26.41■■□□□ 1.82
SCARB1-203ENST00000415380 ARHGAP35Q9NRY4 1499 aa26.38■■□□□ 1.81
SCARB1-203ENST00000415380 CUX2O14529 1486 aa26.34■■□□□ 1.81
SCARB1-203ENST00000415380 CCNB3Q8WWL7 1395 aa26.31■■□□□ 1.8
SCARB1-203ENST00000415380 PRDM2Q13029 1718 aa26.21■■□□□ 1.79
SCARB1-203ENST00000415380 IGF1RP08069 1367 aa26.2■■□□□ 1.78
SCARB1-203ENST00000415380 ITGAEP38570 1179 aa26.18■■□□□ 1.78
SCARB1-203ENST00000415380 TIAM1Q13009 1591 aa26.14■■□□□ 1.78
SCARB1-203ENST00000415380 MAP3K1Q13233 1512 aa26.12■■□□□ 1.77
SCARB1-203ENST00000415380 RAB3GAP2Q9H2M9 1393 aa26.11■■□□□ 1.77
SCARB1-203ENST00000415380 CARMIL1Q5VZK9 1371 aa26.08■■□□□ 1.77
SCARB1-203ENST00000415380 MAPKBP1O60336 1514 aa26.07■■□□□ 1.76
SCARB1-203ENST00000415380 FGD5Q6ZNL6 1462 aa26.05■■□□□ 1.76
SCARB1-203ENST00000415380 CADPSQ9ULU8 1353 aa26.05■■□□□ 1.76
SCARB1-203ENST00000415380 LRRC9Q6ZRR7 1453 aa26.04■■□□□ 1.76
SCARB1-203ENST00000415380 MYT1Q01538 1121 aa26.01■■□□□ 1.75
SCARB1-203ENST00000415380 SETD5Q9C0A6 1442 aa26■■□□□ 1.75
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms