RNA–Protein interactions for RNA: ENST00000435525.1

CTDSPL-204, Transcript of CTD small phosphatase like, humanhuman

TSL 3

Gene CTDSPL, Length 371 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL-204ENST00000435525 NISCHQ9Y2I1 1504 aa38.96■■■■□ 3.83
CTDSPL-204ENST00000435525 CCDC180Q9P1Z9 1646 aa34.39■■■■□ 3.1
CTDSPL-204ENST00000435525 ABCC9O60706 1549 aa33.27■■■□□ 2.92
CTDSPL-204ENST00000435525 DCAF8L2P0C7V8 631 aa32.54■■■□□ 2.8
CTDSPL-204ENST00000435525 ZCCHC6Q5VYS8 1495 aaKnown RBP32.54■■■□□ 2.8
CTDSPL-204ENST00000435525 NACADO15069 1562 aa32.31■■■□□ 2.76
CTDSPL-204ENST00000435525 DCAF1Q9Y4B6 1507 aa32.28■■■□□ 2.76
CTDSPL-204ENST00000435525 MYO15BQ96JP2 1530 aa32.26■■■□□ 2.76
CTDSPL-204ENST00000435525 RB1CC1Q8TDY2 1594 aa32.24■■■□□ 2.75
CTDSPL-204ENST00000435525 SCRIBQ14160 1630 aa31.42■■■□□ 2.62
CTDSPL-204ENST00000435525 UNC13AQ9UPW8 1703 aa31.23■■■□□ 2.59
CTDSPL-204ENST00000435525 PABPN1Q86U42 306 aaKnown RBP eCLIP31.2■■■□□ 2.59
CTDSPL-204ENST00000435525 SHROOM4Q9ULL8 1493 aa31.09■■■□□ 2.57
CTDSPL-204ENST00000435525 BICRAQ9NZM4 1560 aa31.09■■■□□ 2.57
CTDSPL-204ENST00000435525 EIF4G1Q04637 1599 aaKnown RBP30.31■■■□□ 2.44
CTDSPL-204ENST00000435525 CECR2Q9BXF3 1484 aa30.25■■■□□ 2.43
CTDSPL-204ENST00000435525 BAZ1AQ9NRL2 1556 aaPredicted RBP30.21■■■□□ 2.43
CTDSPL-204ENST00000435525 SMARCA4P51532 1647 aa30.09■■■□□ 2.41
CTDSPL-204ENST00000435525 CC2D2AQ9P2K1 1620 aa30.05■■■□□ 2.4
CTDSPL-204ENST00000435525 DNAJC5BQ9UF47 199 aa30.03■■■□□ 2.4
CTDSPL-204ENST00000435525 MROH2BQ7Z745 1585 aa29.98■■■□□ 2.39
CTDSPL-204ENST00000435525 SMARCA2P51531 1590 aa29.91■■■□□ 2.38
CTDSPL-204ENST00000435525 RSF1Q96T23 1441 aaPredicted RBP29.87■■■□□ 2.37
CTDSPL-204ENST00000435525 ATAD2BQ9ULI0 1458 aa29.87■■■□□ 2.37
CTDSPL-204ENST00000435525 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
CTDSPL-204ENST00000435525 PEG3Q9GZU2 1588 aa29.79■■■□□ 2.36
CTDSPL-204ENST00000435525 BAZ1BQ9UIG0 1483 aaKnown RBP29.7■■■□□ 2.35
CTDSPL-204ENST00000435525 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
CTDSPL-204ENST00000435525 WIZO95785 1651 aa29.64■■■□□ 2.34
CTDSPL-204ENST00000435525 SUPT5HO00267 1087 aaKnown RBP29.57■■■□□ 2.32
CTDSPL-204ENST00000435525 TOP2AP11388 1531 aaKnown RBP29.45■■■□□ 2.31
CTDSPL-204ENST00000435525 CCDC88BA6NC98 1476 aa29.1■■■□□ 2.25
CTDSPL-204ENST00000435525 CADPSQ9ULU8 1353 aa29.01■■■□□ 2.23
CTDSPL-204ENST00000435525 LAMC3Q9Y6N6 1575 aa28.93■■■□□ 2.22
CTDSPL-204ENST00000435525 CFTRP13569 1480 aa28.88■■■□□ 2.21
CTDSPL-204ENST00000435525 NESP48681 1621 aa28.86■■■□□ 2.21
CTDSPL-204ENST00000435525 PDS5BQ9NTI5 1447 aa28.83■■■□□ 2.21
CTDSPL-204ENST00000435525 ERCC6Q03468 1493 aa28.75■■■□□ 2.19
CTDSPL-204ENST00000435525 FANCD2Q9BXW9 1451 aa28.64■■■□□ 2.17
CTDSPL-204ENST00000435525 CEP164Q9UPV0 1460 aa28.59■■■□□ 2.17
CTDSPL-204ENST00000435525 PRDM2Q13029 1718 aa28.54■■■□□ 2.16
CTDSPL-204ENST00000435525 KIF21AQ7Z4S6 1674 aa28.46■■■□□ 2.15
CTDSPL-204ENST00000435525 MRC2Q9UBG0 1479 aa28.44■■■□□ 2.14
CTDSPL-204ENST00000435525 ABCC8Q09428 1581 aa28.34■■■□□ 2.13
CTDSPL-204ENST00000435525 THOC2Q8NI27 1593 aaKnown RBP28.29■■■□□ 2.12
CTDSPL-204ENST00000435525 WDR62O43379 1518 aa28.26■■■□□ 2.11
CTDSPL-204ENST00000435525 URB2Q14146 1524 aaKnown RBP28.25■■■□□ 2.11
CTDSPL-204ENST00000435525 CUX2O14529 1486 aa28.24■■■□□ 2.11
CTDSPL-204ENST00000435525 WRNQ14191 1432 aaPredicted RBP eCLIP28.22■■■□□ 2.11
CTDSPL-204ENST00000435525 DNMBPQ6XZF7 1577 aa28.21■■■□□ 2.11
CTDSPL-204ENST00000435525 TOPBP1Q92547 1522 aa28.2■■■□□ 2.1
CTDSPL-204ENST00000435525 CUX1P39880 1505 aa28.11■■■□□ 2.09
CTDSPL-204ENST00000435525 TOP2BQ02880 1626 aa28.01■■■□□ 2.07
CTDSPL-204ENST00000435525 FGD5Q6ZNL6 1462 aa28■■■□□ 2.07
CTDSPL-204ENST00000435525 POLA1P09884 1462 aaPredicted RBP27.99■■■□□ 2.07
CTDSPL-204ENST00000435525 IFT140Q96RY7 1462 aa27.98■■■□□ 2.07
CTDSPL-204ENST00000435525 SYNJ1O43426 1573 aa27.98■■■□□ 2.07
CTDSPL-204ENST00000435525 BIVM-ERCC5R4GMW8 1640 aa27.96■■■□□ 2.07
CTDSPL-204ENST00000435525 SOGA1O94964 1423 aa27.96■■■□□ 2.07
CTDSPL-204ENST00000435525 TRIM41Q8WV44 630 aa27.96■■■□□ 2.07
CTDSPL-204ENST00000435525 RAD54L2Q9Y4B4 1467 aa27.84■■■□□ 2.05
CTDSPL-204ENST00000435525 CHIC1Q5VXU3 224 aa27.81■■■□□ 2.04
CTDSPL-204ENST00000435525 TARBP1Q13395 1621 aaKnown RBP27.78■■■□□ 2.04
CTDSPL-204ENST00000435525 ABCA10Q8WWZ4 1543 aa27.77■■■□□ 2.04
CTDSPL-204ENST00000435525 TDRD9Q8NDG6 1382 aaKnown RBP27.72■■■□□ 2.03
CTDSPL-204ENST00000435525 ZNF608Q9ULD9 1512 aaPredicted RBP27.7■■■□□ 2.02
CTDSPL-204ENST00000435525 WDR97A6NE52 1622 aa27.7■■■□□ 2.02
CTDSPL-204ENST00000435525 AQRO60306 1485 aaKnown RBP eCLIP27.65■■■□□ 2.02
CTDSPL-204ENST00000435525 KIF27Q86VH2 1401 aa27.64■■■□□ 2.02
CTDSPL-204ENST00000435525 GAPVD1Q14C86 1478 aa27.63■■■□□ 2.01
CTDSPL-204ENST00000435525 EIF4G3O43432 1585 aaKnown RBP27.6■■■□□ 2.01
CTDSPL-204ENST00000435525 GRIN2BQ13224 1484 aa27.58■■■□□ 2.01
CTDSPL-204ENST00000435525 ABCA5Q8WWZ7 1642 aa27.52■■■□□ 2
CTDSPL-204ENST00000435525 ERICH3Q5RHP9 1530 aa27.46■■□□□ 1.99
CTDSPL-204ENST00000435525 EEA1Q15075 1411 aa27.45■■□□□ 1.98
CTDSPL-204ENST00000435525 MAGI1Q96QZ7 1491 aaPredicted RBP27.44■■□□□ 1.98
CTDSPL-204ENST00000435525 SNAPC4Q5SXM2 1469 aa27.42■■□□□ 1.98
CTDSPL-204ENST00000435525 IGF1RP08069 1367 aa27.39■■□□□ 1.98
CTDSPL-204ENST00000435525 CHMP7Q8WUX9 453 aaPredicted RBP27.39■■□□□ 1.98
CTDSPL-204ENST00000435525 PBRM1Q86U86 1689 aa27.39■■□□□ 1.97
CTDSPL-204ENST00000435525 FBLN2P98095 1184 aa27.38■■□□□ 1.97
CTDSPL-204ENST00000435525 FHAD1B1AJZ9 1412 aa27.35■■□□□ 1.97
CTDSPL-204ENST00000435525 RUSC2Q8N2Y8 1516 aa27.33■■□□□ 1.97
CTDSPL-204ENST00000435525 SYNJ2O15056 1496 aa27.32■■□□□ 1.96
CTDSPL-204ENST00000435525 CSRNP3Q8WYN3 585 aa27.32■■□□□ 1.96
CTDSPL-204ENST00000435525 FAM9AQ8IZU1 332 aaPredicted RBP27.31■■□□□ 1.96
CTDSPL-204ENST00000435525 CARMIL1Q5VZK9 1371 aa27.3■■□□□ 1.96
CTDSPL-204ENST00000435525 CUL7Q14999 1698 aa27.27■■□□□ 1.96
CTDSPL-204ENST00000435525 ADAMTS12P58397 1594 aa27.26■■□□□ 1.95
CTDSPL-204ENST00000435525 OSCARQ8IYS5 282 aa27.23■■□□□ 1.95
CTDSPL-204ENST00000435525 GRIN2AQ12879 1464 aa27.18■■□□□ 1.94
CTDSPL-204ENST00000435525 RAPGEF2Q9Y4G8 1499 aa27.17■■□□□ 1.94
CTDSPL-204ENST00000435525 PRXQ9BXM0 1461 aa27.13■■□□□ 1.93
CTDSPL-204ENST00000435525 CHD1O14646 1710 aa27.1■■□□□ 1.93
CTDSPL-204ENST00000435525 NUP160Q12769 1436 aa27.03■■□□□ 1.92
CTDSPL-204ENST00000435525 KIF21BO75037 1637 aa26.98■■□□□ 1.91
CTDSPL-204ENST00000435525 GOLGA3Q08378 1498 aa26.94■■□□□ 1.9
CTDSPL-204ENST00000435525 CEP170Q5SW79 1584 aa26.93■■□□□ 1.9
CTDSPL-204ENST00000435525 UBTFP17480 764 aaKnown RBP26.93■■□□□ 1.9
CTDSPL-204ENST00000435525 KIAA0586Q9BVV6 1533 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms