Protein–RNA interactions for Protein: P52298

NCBP2, Nuclear cap-binding protein subunit 2, humanhuman

Known RBP eCLIP

Length 156 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NCBP2P52298 STX16-202ENST00000355957 4897 ntTSL 2 BASIC12.12□□□□□ -0.478e-18■■□□□ 13.6
NCBP2P52298 STX16-205ENST00000361830 4318 ntTSL 5 BASIC11.62□□□□□ -0.558e-18■■□□□ 13.6
NCBP2P52298 STX16-220ENST00000496117 528 ntTSL 510.42□□□□□ -0.748e-18■■□□□ 13.6
NCBP2P52298 STX16-204ENST00000359617 4273 ntTSL 5 BASIC9.95□□□□□ -0.828e-18■■□□□ 13.6
NCBP2P52298 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC19.13■□□□□ 0.651e-8■■□□□ 13.6
NCBP2P52298 MATR3-221ENST00000513121 573 ntTSL 217.45■□□□□ 0.381e-8■■□□□ 13.6
NCBP2P52298 MATR3-208ENST00000504045 1530 ntTSL 515.49■□□□□ 0.071e-8■■□□□ 13.6
NCBP2P52298 MATR3-222ENST00000513678 444 ntTSL 215.3■□□□□ 0.041e-8■■□□□ 13.6
NCBP2P52298 MATR3-220ENST00000512876 575 ntTSL 315.23■□□□□ 0.031e-8■■□□□ 13.6
NCBP2P52298 MATR3-227ENST00000618441 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.631e-8■■□□□ 13.6
NCBP2P52298 MATR3-201ENST00000394805 4843 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.091e-8■■□□□ 13.6
NCBP2P52298 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.61□□□□□ -1.511e-8■■□□□ 13.6
NCBP2P52298 MATR3-215ENST00000510056 3040 ntTSL 5 BASIC5.33□□□□□ -1.561e-8■■□□□ 13.6
NCBP2P52298 MATR3-218ENST00000511978 573 ntTSL 34.59□□□□□ -1.671e-8■■□□□ 13.6
NCBP2P52298 MATR3-214ENST00000509918 377 ntTSL 44.23□□□□□ -1.731e-8■■□□□ 13.6
NCBP2P52298 MATR3-212ENST00000507860 571 ntTSL 44.04□□□□□ -1.761e-8■■□□□ 13.6
NCBP2P52298 MATR3-216ENST00000511249 447 ntTSL 43.58□□□□□ -1.841e-8■■□□□ 13.6
NCBP2P52298 MATR3-209ENST00000504311 423 ntTSL 32.73□□□□□ -1.971e-8■■□□□ 13.6
NCBP2P52298 NUP35-209ENST00000479162 2828 ntTSL 28.41□□□□□ -1.069e-7■■□□□ 13.6
NCBP2P52298 NUP35-202ENST00000374930 998 ntTSL 27.28□□□□□ -1.249e-7■■□□□ 13.6
NCBP2P52298 NUP35-210ENST00000497330 544 ntTSL 54.61□□□□□ -1.679e-7■■□□□ 13.6
NCBP2P52298 NUP35-204ENST00000442895 616 ntTSL 43.62□□□□□ -1.839e-7■■□□□ 13.6
NCBP2P52298 NUP35-206ENST00000452137 755 ntTSL 53.36□□□□□ -1.879e-7■■□□□ 13.6
NCBP2P52298 NUP35-201ENST00000295119 1633 ntAPPRIS P1 TSL 1 (best) BASIC3.09□□□□□ -1.919e-7■■□□□ 13.6
NCBP2P52298 NUP35-203ENST00000409798 1470 ntTSL 2 BASIC2.81□□□□□ -1.969e-7■■□□□ 13.6
NCBP2P52298 NUP35-207ENST00000455063 342 ntTSL 51.96□□□□□ -2.19e-7■■□□□ 13.6
NCBP2P52298 NUP35-205ENST00000446612 470 ntTSL 31.53□□□□□ -2.169e-7■■□□□ 13.6
NCBP2P52298 LRRC8D-205ENST00000525774 588 ntTSL 422.04■■□□□ 1.122e-6■■□□□ 13.6
NCBP2P52298 AC009086.3-201ENST00000623486 1008 ntBASIC20.86■□□□□ 0.932e-6■■□□□ 13.6
NCBP2P52298 AC093423.3-201ENST00000370453 654 ntAPPRIS P1 TSL 5 BASIC14.79□□□□□ -0.042e-6■■□□□ 13.6
NCBP2P52298 CENPO-209ENST00000498362 761 ntTSL 513.85□□□□□ -0.192e-6■■□□□ 13.6
NCBP2P52298 CENPO-207ENST00000486527 748 ntTSL 213.85□□□□□ -0.192e-6■■□□□ 13.6
NCBP2P52298 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.252e-6■■□□□ 13.6
NCBP2P52298 CENPO-208ENST00000491031 1579 ntTSL 211.46□□□□□ -0.572e-6■■□□□ 13.6
NCBP2P52298 CENPO-201ENST00000260662 4085 ntAPPRIS P1 TSL 1 (best) BASIC10.31□□□□□ -0.762e-6■■□□□ 13.6
NCBP2P52298 ZNF638-226ENST00000494621 871 ntTSL 316.76■□□□□ 0.279e-9■■□□□ 13.6
NCBP2P52298 ZNF638-206ENST00000437658 931 ntTSL 215.21■□□□□ 0.039e-9■■□□□ 13.6
NCBP2P52298 ZNF638-213ENST00000466330 746 ntTSL 313.57□□□□□ -0.249e-9■■□□□ 13.6
NCBP2P52298 ZNF638-216ENST00000475743 590 ntTSL 413.12□□□□□ -0.319e-9■■□□□ 13.6
NCBP2P52298 ZNF638-212ENST00000464375 626 ntTSL 313.11□□□□□ -0.319e-9■■□□□ 13.6
NCBP2P52298 ZNF638-214ENST00000466975 560 ntTSL 412.17□□□□□ -0.469e-9■■□□□ 13.6
NCBP2P52298 ZNF638-205ENST00000417778 760 ntTSL 312□□□□□ -0.499e-9■■□□□ 13.6
NCBP2P52298 ZNF638-209ENST00000455226 585 ntTSL 410.78□□□□□ -0.689e-9■■□□□ 13.6
NCBP2P52298 ZNF638-204ENST00000410075 3518 ntTSL 1 (best) BASIC10.42□□□□□ -0.749e-9■■□□□ 13.6
NCBP2P52298 ZNF638-207ENST00000454122 731 ntTSL 310.19□□□□□ -0.789e-9■■□□□ 13.6
NCBP2P52298 ZNF638-208ENST00000454278 595 ntTSL 49.75□□□□□ -0.859e-9■■□□□ 13.6
NCBP2P52298 ZNF638-220ENST00000487707 592 ntTSL 39.01□□□□□ -0.979e-9■■□□□ 13.6
NCBP2P52298 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC5.92□□□□□ -1.469e-9■■□□□ 13.6
NCBP2P52298 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.78□□□□□ -1.89e-9■■□□□ 13.6
NCBP2P52298 ASPSCR1-213ENST00000582355 1246 ntTSL 521.75■■□□□ 1.071e-7■■□□□ 13.6
NCBP2P52298 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC19.53■□□□□ 0.722e-6■■□□□ 13.6
NCBP2P52298 TAF4-207ENST00000608887 284 ntTSL 47.75□□□□□ -1.172e-6■■□□□ 13.6
NCBP2P52298 PLXNB1-209ENST00000466353 626 ntTSL 317.1■□□□□ 0.337e-8■■□□□ 13.6
NCBP2P52298 LINC01578-201ENST00000553829 732 ntTSL 2 BASIC26.63■■□□□ 1.855e-11■■□□□ 13.5
NCBP2P52298 LINC01578-203ENST00000554669 578 ntTSL 5 BASIC26.59■■□□□ 1.855e-11■■□□□ 13.5
NCBP2P52298 LINC01578-204ENST00000554894 556 ntTSL 3 BASIC25.88■■□□□ 1.735e-11■■□□□ 13.5
NCBP2P52298 LINC01578-207ENST00000556895 802 ntTSL 2 BASIC25.88■■□□□ 1.735e-11■■□□□ 13.5
NCBP2P52298 LINC01578-209ENST00000557682 2683 ntTSL 2 BASIC21.67■■□□□ 1.065e-11■■□□□ 13.5
NCBP2P52298 FNIP1-206ENST00000623690 1373 nt20.43■□□□□ 0.861e-17■■□□□ 13.5
NCBP2P52298 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC18.25■□□□□ 0.511e-17■■□□□ 13.5
NCBP2P52298 FNIP1-205ENST00000615660 6589 ntTSL 5 BASIC12.53□□□□□ -0.41e-17■■□□□ 13.5
NCBP2P52298 FNIP1-203ENST00000510461 3845 ntAPPRIS P4 TSL 1 (best) BASIC9.29□□□□□ -0.921e-17■■□□□ 13.5
NCBP2P52298 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC5.21□□□□□ -1.581e-17■■□□□ 13.5
NCBP2P52298 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.99□□□□□ -1.611e-17■■□□□ 13.5
NCBP2P52298 TRA2B-203ENST00000382191 976 ntTSL 2 BASIC18.17■□□□□ 0.53e-15■■□□□ 13.5
NCBP2P52298 TRA2B-202ENST00000342294 288 ntTSL 1 (best) BASIC14.9□□□□□ -0.023e-15■■□□□ 13.5
NCBP2P52298 TRA2B-205ENST00000453386 2952 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.043e-15■■□□□ 13.5
NCBP2P52298 TRA2B-212ENST00000480461 538 ntTSL 1 (best)11.36□□□□□ -0.593e-15■■□□□ 13.5
NCBP2P52298 TRA2B-213ENST00000485530 839 ntTSL 211.36□□□□□ -0.593e-15■■□□□ 13.5
NCBP2P52298 TRA2B-206ENST00000456380 1697 ntTSL 511.11□□□□□ -0.633e-15■■□□□ 13.5
NCBP2P52298 TRA2B-208ENST00000465245 634 ntTSL 310.67□□□□□ -0.73e-15■■□□□ 13.5
NCBP2P52298 PPP1R10-201ENST00000376511 4525 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.441e-10■■□□□ 13.5
NCBP2P52298 PPP1R10-206ENST00000484449 605 ntTSL 53.57□□□□□ -1.841e-10■■□□□ 13.5
NCBP2P52298 PPP1R10-204ENST00000473954 470 ntTSL 33.25□□□□□ -1.891e-10■■□□□ 13.5
NCBP2P52298 MCU-208ENST00000604372 894 ntTSL 1 (best)25.66■■□□□ 1.71e-6■■□□□ 13.5
NCBP2P52298 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC25.18■■□□□ 1.621e-6■■□□□ 13.5
NCBP2P52298 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.39■■□□□ 1.491e-6■■□□□ 13.5
NCBP2P52298 TCEA2-201ENST00000339217 953 ntTSL 323.96■■□□□ 1.431e-6■■□□□ 13.5
NCBP2P52298 AL359504.2-201ENST00000605506 1601 ntBASIC23.02■■□□□ 1.281e-6■■□□□ 13.5
NCBP2P52298 TCEA2-216ENST00000487164 1060 ntTSL 1 (best)21.69■■□□□ 1.061e-6■■□□□ 13.5
NCBP2P52298 USP12-201ENST00000282344 4511 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.961e-6■■□□□ 13.5
NCBP2P52298 TRMT6-205ENST00000493972 778 ntTSL 218.64■□□□□ 0.571e-6■■□□□ 13.5
NCBP2P52298 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC18.5■□□□□ 0.551e-6■■□□□ 13.5
NCBP2P52298 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC18.41■□□□□ 0.541e-6■■□□□ 13.5
NCBP2P52298 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC17.7■□□□□ 0.421e-6■■□□□ 13.5
NCBP2P52298 TRMT6-201ENST00000203001 2327 ntAPPRIS P1 TSL 1 (best) BASIC17■□□□□ 0.311e-6■■□□□ 13.5
NCBP2P52298 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC16.53■□□□□ 0.241e-6■■□□□ 13.5
NCBP2P52298 TRMT6-203ENST00000466974 2976 ntTSL 215.3■□□□□ 0.041e-6■■□□□ 13.5
NCBP2P52298 ZNF248-206ENST00000485560 1705 ntTSL 1 (best)15.16■□□□□ 0.024e-13■■□□□ 13.5
NCBP2P52298 ARF6-201ENST00000298316 3865 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 01e-6■■□□□ 13.5
NCBP2P52298 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.76□□□□□ -0.051e-6■■□□□ 13.5
NCBP2P52298 TRMT6-204ENST00000473131 3025 ntTSL 514.76□□□□□ -0.051e-6■■□□□ 13.5
NCBP2P52298 SDHC-209ENST00000515731 651 ntTSL 314.39□□□□□ -0.111e-6■■□□□ 13.5
NCBP2P52298 AL139353.1-203ENST00000547760 749 ntTSL 314.23□□□□□ -0.131e-6■■□□□ 13.5
NCBP2P52298 TCEA2-203ENST00000361317 1427 ntTSL 2 BASIC13.96□□□□□ -0.181e-6■■□□□ 13.5
NCBP2P52298 RINT1-206ENST00000493041 563 ntTSL 513.86□□□□□ -0.191e-9■■□□□ 13.5
NCBP2P52298 DTD2-201ENST00000310850 2717 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.241e-6■■□□□ 13.5
NCBP2P52298 RINT1-205ENST00000482041 578 ntTSL 413.55□□□□□ -0.241e-9■■□□□ 13.5
NCBP2P52298 DTD2-203ENST00000549850 823 ntTSL 213.29□□□□□ -0.281e-6■■□□□ 13.5
NCBP2P52298 RINT1-202ENST00000467392 837 ntTSL 312.73□□□□□ -0.371e-9■■□□□ 13.5
Retrieved 100 of 18,329 protein–RNA pairs in 142.8 ms