RNA–Protein interactions for RNA: ENST00000342751.8

SDHC-201, Transcript of succinate dehydrogenase complex subunit C, humanhuman

TSL 1 (best) BASIC

Gene SDHC, Length 1,127 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDHC-201ENST00000342751 NISCHQ9Y2I1 1504 aa50.24■■■■■ 5.63
SDHC-201ENST00000342751 CCDC180Q9P1Z9 1646 aa44.92■■■■■ 4.78
SDHC-201ENST00000342751 ABCC9O60706 1549 aa44.77■■■■■ 4.76
SDHC-201ENST00000342751 RB1CC1Q8TDY2 1594 aa42.68■■■■■ 4.42
SDHC-201ENST00000342751 DCAF8L2P0C7V8 631 aa42.47■■■■■ 4.39
SDHC-201ENST00000342751 NACADO15069 1562 aa42.39■■■■■ 4.38
SDHC-201ENST00000342751 MYO15BQ96JP2 1530 aa41.82■■■■■ 4.29
SDHC-201ENST00000342751 DNAJC5BQ9UF47 199 aa41.82■■■■■ 4.29
SDHC-201ENST00000342751 UNC13AQ9UPW8 1703 aa41.75■■■■■ 4.27
SDHC-201ENST00000342751 PABPN1Q86U42 306 aaKnown RBP eCLIP41.74■■■■■ 4.27
SDHC-201ENST00000342751 ZCCHC6Q5VYS8 1495 aaKnown RBP41.72■■■■■ 4.27
SDHC-201ENST00000342751 DCAF1Q9Y4B6 1507 aa41.42■■■■■ 4.22
SDHC-201ENST00000342751 BICRAQ9NZM4 1560 aa41.42■■■■■ 4.22
SDHC-201ENST00000342751 SCRIBQ14160 1630 aa41.12■■■■■ 4.17
SDHC-201ENST00000342751 SHROOM4Q9ULL8 1493 aa40.85■■■■■ 4.13
SDHC-201ENST00000342751 CC2D2AQ9P2K1 1620 aa40.45■■■■■ 4.07
SDHC-201ENST00000342751 EIF4G1Q04637 1599 aaKnown RBP40.4■■■■■ 4.06
SDHC-201ENST00000342751 CECR2Q9BXF3 1484 aa40.31■■■■■ 4.04
SDHC-201ENST00000342751 SMARCA4P51532 1647 aa39.16■■■■□ 3.86
SDHC-201ENST00000342751 NCAPD3P42695 1498 aa39.11■■■■□ 3.85
SDHC-201ENST00000342751 ATAD2BQ9ULI0 1458 aa39.09■■■■□ 3.85
SDHC-201ENST00000342751 SMARCA2P51531 1590 aa38.99■■■■□ 3.83
SDHC-201ENST00000342751 BAZ1AQ9NRL2 1556 aaPredicted RBP38.99■■■■□ 3.83
SDHC-201ENST00000342751 HMGXB3Q12766 1538 aa38.87■■■■□ 3.81
SDHC-201ENST00000342751 BAZ1BQ9UIG0 1483 aaKnown RBP38.79■■■■□ 3.8
SDHC-201ENST00000342751 MROH2BQ7Z745 1585 aa38.77■■■■□ 3.8
SDHC-201ENST00000342751 PEG3Q9GZU2 1588 aa38.66■■■■□ 3.78
SDHC-201ENST00000342751 ERCC6Q03468 1493 aa38.66■■■■□ 3.78
SDHC-201ENST00000342751 NESP48681 1621 aa38.52■■■■□ 3.76
SDHC-201ENST00000342751 CUX2O14529 1486 aa38.52■■■■□ 3.76
SDHC-201ENST00000342751 WIZO95785 1651 aa38.36■■■■□ 3.73
SDHC-201ENST00000342751 DNAJC5Q9H3Z4 198 aa38.3■■■■□ 3.72
SDHC-201ENST00000342751 LAMC3Q9Y6N6 1575 aa38.25■■■■□ 3.71
SDHC-201ENST00000342751 THOC2Q8NI27 1593 aaKnown RBP38.1■■■■□ 3.69
SDHC-201ENST00000342751 RSF1Q96T23 1441 aaPredicted RBP38.05■■■■□ 3.68
SDHC-201ENST00000342751 KIF21AQ7Z4S6 1674 aa38.04■■■■□ 3.68
SDHC-201ENST00000342751 PDS5BQ9NTI5 1447 aa38■■■■□ 3.67
SDHC-201ENST00000342751 CADPSQ9ULU8 1353 aa37.97■■■■□ 3.67
SDHC-201ENST00000342751 TOP2AP11388 1531 aaKnown RBP37.85■■■■□ 3.65
SDHC-201ENST00000342751 MRC2Q9UBG0 1479 aa37.69■■■■□ 3.62
SDHC-201ENST00000342751 CEP164Q9UPV0 1460 aa37.62■■■■□ 3.61
SDHC-201ENST00000342751 FANCD2Q9BXW9 1451 aa37.6■■■■□ 3.61
SDHC-201ENST00000342751 WDR62O43379 1518 aa37.59■■■■□ 3.61
SDHC-201ENST00000342751 CFTRP13569 1480 aa37.58■■■■□ 3.61
SDHC-201ENST00000342751 CCDC88BA6NC98 1476 aa37.42■■■■□ 3.58
SDHC-201ENST00000342751 PRDM2Q13029 1718 aa37.29■■■■□ 3.56
SDHC-201ENST00000342751 URB2Q14146 1524 aaKnown RBP37.26■■■■□ 3.56
SDHC-201ENST00000342751 TOPBP1Q92547 1522 aa36.91■■■■□ 3.5
SDHC-201ENST00000342751 IFT140Q96RY7 1462 aa36.82■■■■□ 3.48
SDHC-201ENST00000342751 DNMBPQ6XZF7 1577 aa36.81■■■■□ 3.48
SDHC-201ENST00000342751 SUPT5HO00267 1087 aaKnown RBP36.78■■■■□ 3.48
SDHC-201ENST00000342751 ZNF608Q9ULD9 1512 aaPredicted RBP36.78■■■■□ 3.48
SDHC-201ENST00000342751 ABCC8Q09428 1581 aa36.77■■■■□ 3.48
SDHC-201ENST00000342751 OSCARQ8IYS5 282 aa36.75■■■■□ 3.47
SDHC-201ENST00000342751 TRIM41Q8WV44 630 aa36.74■■■■□ 3.47
SDHC-201ENST00000342751 EIF4G3O43432 1585 aaKnown RBP36.6■■■■□ 3.45
SDHC-201ENST00000342751 POLA1P09884 1462 aaPredicted RBP36.56■■■■□ 3.44
SDHC-201ENST00000342751 TARBP1Q13395 1621 aaKnown RBP36.53■■■■□ 3.44
SDHC-201ENST00000342751 AQRO60306 1485 aaKnown RBP eCLIP36.49■■■■□ 3.43
SDHC-201ENST00000342751 RAD54L2Q9Y4B4 1467 aa36.47■■■■□ 3.43
SDHC-201ENST00000342751 CUX1P39880 1505 aa36.42■■■■□ 3.42
SDHC-201ENST00000342751 FGD5Q6ZNL6 1462 aa36.41■■■■□ 3.42
SDHC-201ENST00000342751 SOGA1O94964 1423 aa36.4■■■■□ 3.42
SDHC-201ENST00000342751 TDRD9Q8NDG6 1382 aaKnown RBP36.32■■■■□ 3.4
SDHC-201ENST00000342751 RIMBP3CA6NJZ7 1639 aa36.32■■■■□ 3.4
SDHC-201ENST00000342751 RIMBP3BA6NNM3 1639 aa36.32■■■■□ 3.4
SDHC-201ENST00000342751 RIMBP3Q9UFD9 1639 aa36.32■■■■□ 3.4
SDHC-201ENST00000342751 CHD1O14646 1710 aa36.29■■■■□ 3.4
SDHC-201ENST00000342751 FBLN2P98095 1184 aa36.27■■■■□ 3.4
SDHC-201ENST00000342751 ARHGEF11O15085 1522 aa36.2■■■■□ 3.39
SDHC-201ENST00000342751 SNAPC4Q5SXM2 1469 aa36.15■■■■□ 3.38
SDHC-201ENST00000342751 WDR97A6NE52 1622 aa36.14■■■■□ 3.38
SDHC-201ENST00000342751 GRIN2BQ13224 1484 aa36.04■■■■□ 3.36
SDHC-201ENST00000342751 MAGI1Q96QZ7 1491 aaPredicted RBP35.98■■■■□ 3.35
SDHC-201ENST00000342751 PBRM1Q86U86 1689 aa35.97■■■■□ 3.35
SDHC-201ENST00000342751 CHMP7Q8WUX9 453 aaPredicted RBP35.97■■■■□ 3.35
SDHC-201ENST00000342751 GAPVD1Q14C86 1478 aa35.97■■■■□ 3.35
SDHC-201ENST00000342751 ABCA10Q8WWZ4 1543 aa35.94■■■■□ 3.34
SDHC-201ENST00000342751 WRNQ14191 1432 aaPredicted RBP eCLIP35.92■■■■□ 3.34
SDHC-201ENST00000342751 SYNJ1O43426 1573 aa35.91■■■■□ 3.34
SDHC-201ENST00000342751 CYB5RLQ6IPT4 315 aa35.91■■■■□ 3.34
SDHC-201ENST00000342751 ABCA5Q8WWZ7 1642 aa35.89■■■■□ 3.34
SDHC-201ENST00000342751 TOP2BQ02880 1626 aa35.88■■■■□ 3.33
SDHC-201ENST00000342751 BIVM-ERCC5R4GMW8 1640 aa35.88■■■■□ 3.33
SDHC-201ENST00000342751 SYNJ2O15056 1496 aa35.86■■■■□ 3.33
SDHC-201ENST00000342751 ARAP1Q96P48 1450 aa35.86■■■■□ 3.33
SDHC-201ENST00000342751 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
SDHC-201ENST00000342751 ADAMTS12P58397 1594 aa35.64■■■■□ 3.3
SDHC-201ENST00000342751 GRIN2AQ12879 1464 aa35.58■■■■□ 3.29
SDHC-201ENST00000342751 FHAD1B1AJZ9 1412 aa35.49■■■■□ 3.27
SDHC-201ENST00000342751 ERICH3Q5RHP9 1530 aa35.49■■■■□ 3.27
SDHC-201ENST00000342751 TRHP20396 242 aaPredicted RBP35.49■■■■□ 3.27
SDHC-201ENST00000342751 CEP170Q5SW79 1584 aa35.47■■■■□ 3.27
SDHC-201ENST00000342751 NUP160Q12769 1436 aa35.4■■■■□ 3.26
SDHC-201ENST00000342751 ERCC6L2Q5T890 1561 aa35.34■■■■□ 3.25
SDHC-201ENST00000342751 SHROOM2Q13796 1616 aa35.23■■■■□ 3.23
SDHC-201ENST00000342751 KIF27Q86VH2 1401 aa35.21■■■■□ 3.23
SDHC-201ENST00000342751 IGF1RP08069 1367 aa35.12■■■■□ 3.21
SDHC-201ENST00000342751 RUSC2Q8N2Y8 1516 aa35.11■■■■□ 3.21
SDHC-201ENST00000342751 PRG4Q92954 1404 aaPredicted RBP35.11■■■■□ 3.21
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms