RNA–Protein interactions for RNA: ENST00000446612.5

NUP35-205, Transcript of nucleoporin 35, humanhuman

TSL 3

Gene NUP35, Length 470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-205ENST00000446612 AEBP2Q6ZN18 517 aaPredicted RBP27.12■■□□□ 1.93
NUP35-205ENST00000446612 CHIC1Q5VXU3 224 aa25.58■■□□□ 1.69
NUP35-205ENST00000446612 SENP3Q9H4L4 574 aaPredicted RBP22.95■■□□□ 1.26
NUP35-205ENST00000446612 PHF23Q9BUL5 403 aaPredicted RBP22.7■■□□□ 1.22
NUP35-205ENST00000446612 FOXD1Q16676 465 aa21.52■■□□□ 1.04
NUP35-205ENST00000446612 PLPPR3Q6T4P5 718 aa20.3■□□□□ 0.84
NUP35-205ENST00000446612 PPP6R1Q9UPN7 881 aa20.11■□□□□ 0.81
NUP35-205ENST00000446612 MSH5O43196 834 aa20.03■□□□□ 0.8
NUP35-205ENST00000446612 ADRA2BP18089 450 aa19.96■□□□□ 0.79
NUP35-205ENST00000446612 PIAS4Q8N2W9 510 aaPredicted RBP19.96■□□□□ 0.79
NUP35-205ENST00000446612 POTEDQ86YR6 584 aa19.81■□□□□ 0.76
NUP35-205ENST00000446612 MAPK8IP2Q13387 824 aaPredicted RBP18.38■□□□□ 0.53
NUP35-205ENST00000446612 DMRT2Q9Y5R5 561 aa18.27■□□□□ 0.52
NUP35-205ENST00000446612 SCAF1Q9H7N4 1312 aaKnown RBP18.07■□□□□ 0.48
NUP35-205ENST00000446612 PPP4R3CPQ6ZMV5 832 aa17.82■□□□□ 0.44
NUP35-205ENST00000446612 HOXD11P31277 338 aaPredicted RBP17.59■□□□□ 0.41
NUP35-205ENST00000446612 CNKSR2Q8WXI2 1034 aa17.48■□□□□ 0.39
NUP35-205ENST00000446612 RNF216Q9NWF9 866 aaPredicted RBP17.37■□□□□ 0.37
NUP35-205ENST00000446612 DCAF8L1A6NGE4 600 aa17.29■□□□□ 0.36
NUP35-205ENST00000446612 CACNB1Q02641 598 aaPredicted RBP17.19■□□□□ 0.34
NUP35-205ENST00000446612 RNF39Q9H2S5 420 aa17.19■□□□□ 0.34
NUP35-205ENST00000446612 DNAJC5BQ9UF47 199 aa17■□□□□ 0.31
NUP35-205ENST00000446612 NCBP3Q53F19 620 aaKnown RBP16.98■□□□□ 0.31
NUP35-205ENST00000446612 NPM3O75607 178 aaKnown RBP16.91■□□□□ 0.3
NUP35-205ENST00000446612 C1QBPQ07021 282 aaKnown RBP16.85■□□□□ 0.29
NUP35-205ENST00000446612 GRWD1Q9BQ67 446 aaKnown RBP eCLIP16.57■□□□□ 0.24
NUP35-205ENST00000446612 KCNA4P22459 653 aa16.52■□□□□ 0.24
NUP35-205ENST00000446612 U3KPZ7 1027 aaPredicted RBP16.39■□□□□ 0.21
NUP35-205ENST00000446612 SLC4A2P04920 1241 aa16.24■□□□□ 0.19
NUP35-205ENST00000446612 SPINK5Q9NQ38 1064 aaPredicted RBP16.16■□□□□ 0.18
NUP35-205ENST00000446612 DSG3P32926 999 aa16.06■□□□□ 0.16
NUP35-205ENST00000446612 CAPN15O75808 1086 aa15.98■□□□□ 0.15
NUP35-205ENST00000446612 TRHP20396 242 aaPredicted RBP15.71■□□□□ 0.11
NUP35-205ENST00000446612 ZNF219Q9P2Y4 722 aaPredicted RBP15.7■□□□□ 0.1
NUP35-205ENST00000446612 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP15.69■□□□□ 0.1
NUP35-205ENST00000446612 HNRNPUL2Q1KMD3 747 aaKnown RBP15.69■□□□□ 0.1
NUP35-205ENST00000446612 ABCB7O75027 752 aa15.67■□□□□ 0.1
NUP35-205ENST00000446612 APLP2Q06481 763 aa15.67■□□□□ 0.1
NUP35-205ENST00000446612 SAMD1Q6SPF0 538 aaPredicted RBP15.65■□□□□ 0.1
NUP35-205ENST00000446612 MYCNP04198 464 aaPredicted RBP15.56■□□□□ 0.08
NUP35-205ENST00000446612 SLC4A1APQ9BWU0 796 aaKnown RBP15.47■□□□□ 0.07
NUP35-205ENST00000446612 POTEHQ6S545 545 aa15.45■□□□□ 0.06
NUP35-205ENST00000446612 FOXD4L1Q9NU39 408 aa15.37■□□□□ 0.05
NUP35-205ENST00000446612 ATF5Q9Y2D1 282 aaPredicted RBP15.36■□□□□ 0.05
NUP35-205ENST00000446612 POLA2Q14181 598 aa15.33■□□□□ 0.04
NUP35-205ENST00000446612 ZBTB22O15209 634 aa15.28■□□□□ 0.04
NUP35-205ENST00000446612 RBM42Q9BTD8 480 aaKnown RBP15.18■□□□□ 0.02
NUP35-205ENST00000446612 CHRDL2Q6WN34 429 aa14.96□□□□□ -0.01
NUP35-205ENST00000446612 ZBTB12Q9Y330 459 aaPredicted RBP14.94□□□□□ -0.02
NUP35-205ENST00000446612 ATXN8OSP0DMR3 200 aa14.92□□□□□ -0.02
NUP35-205ENST00000446612 AKT1S1Q96B36 256 aa14.89□□□□□ -0.03
NUP35-205ENST00000446612 OSCARQ8IYS5 282 aa14.88□□□□□ -0.03
NUP35-205ENST00000446612 REM2Q8IYK8 340 aaPredicted RBP14.78□□□□□ -0.04
NUP35-205ENST00000446612 MKRN4PQ13434 485 aaPredicted RBP14.65□□□□□ -0.06
NUP35-205ENST00000446612 PITPNM1O00562 1244 aa14.64□□□□□ -0.07
NUP35-205ENST00000446612 PIP4P2Q8N4L2 257 aa14.64□□□□□ -0.07
NUP35-205ENST00000446612 FXR2P51116 673 aaKnown RBP eCLIP14.56□□□□□ -0.08
NUP35-205ENST00000446612 SPDYE2BA6NHP3 402 aa14.54□□□□□ -0.08
NUP35-205ENST00000446612 SPDYE6P0CI01 402 aa14.54□□□□□ -0.08
NUP35-205ENST00000446612 SPDYE2Q495Y8 402 aa14.54□□□□□ -0.08
NUP35-205ENST00000446612 FBLN2P98095 1184 aa14.51□□□□□ -0.09
NUP35-205ENST00000446612 SP7Q8TDD2 431 aaPredicted RBP14.44□□□□□ -0.1
NUP35-205ENST00000446612 CSRNP3Q8WYN3 585 aa14.44□□□□□ -0.1
NUP35-205ENST00000446612 SSUH2Q9Y2M2 353 aa14.44□□□□□ -0.1
NUP35-205ENST00000446612 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
NUP35-205ENST00000446612 EVX2Q03828 476 aa14.29□□□□□ -0.12
NUP35-205ENST00000446612 SPDYE1Q8NFV5 336 aaPredicted RBP14.26□□□□□ -0.13
NUP35-205ENST00000446612 HAX1O00165 279 aa14.25□□□□□ -0.13
NUP35-205ENST00000446612 PRKAR2AP13861 404 aaKnown RBP14.19□□□□□ -0.14
NUP35-205ENST00000446612 CLEC11AQ9Y240 323 aa14.19□□□□□ -0.14
NUP35-205ENST00000446612 PABPN1Q86U42 306 aaKnown RBP eCLIP14.13□□□□□ -0.15
NUP35-205ENST00000446612 C19orf67A6NJJ6 358 aa14.09□□□□□ -0.15
NUP35-205ENST00000446612 CHADLQ6NUI6 762 aa14.05□□□□□ -0.16
NUP35-205ENST00000446612 EHMT2Q96KQ7 1210 aa14.05□□□□□ -0.16
NUP35-205ENST00000446612 PRR29P0C7W0 189 aa13.96□□□□□ -0.17
NUP35-205ENST00000446612 GABBR2O75899 941 aa13.87□□□□□ -0.19
NUP35-205ENST00000446612 FARP1Q9Y4F1 1045 aaPredicted RBP13.82□□□□□ -0.2
NUP35-205ENST00000446612 CREBZFQ9NS37 354 aa13.76□□□□□ -0.21
NUP35-205ENST00000446612 SPDYE4A6NLX3 237 aa13.75□□□□□ -0.21
NUP35-205ENST00000446612 CD44P16070 742 aaKnown RBP13.73□□□□□ -0.21
NUP35-205ENST00000446612 POTEIP0CG38 1075 aa13.69□□□□□ -0.22
NUP35-205ENST00000446612 STAG3Q9UJ98 1225 aa13.65□□□□□ -0.22
NUP35-205ENST00000446612 PROM2Q8N271 834 aa13.61□□□□□ -0.23
NUP35-205ENST00000446612 MNX1P50219 401 aaPredicted RBP13.6□□□□□ -0.23
NUP35-205ENST00000446612 ZNF579Q8NAF0 562 aaKnown RBP13.59□□□□□ -0.23
NUP35-205ENST00000446612 CLCN6P51797 869 aa13.52□□□□□ -0.25
NUP35-205ENST00000446612 LHX8Q68G74 356 aa13.51□□□□□ -0.25
NUP35-205ENST00000446612 ZRANB1Q9UGI0 708 aa13.5□□□□□ -0.25
NUP35-205ENST00000446612 GALR2O43603 387 aaPredicted RBP13.43□□□□□ -0.26
NUP35-205ENST00000446612 PHF12Q96QT6 1004 aa13.37□□□□□ -0.27
NUP35-205ENST00000446612 DCBLD2Q96PD2 775 aa13.32□□□□□ -0.28
NUP35-205ENST00000446612 NPM1P06748 294 aaKnown RBP eCLIP13.31□□□□□ -0.28
NUP35-205ENST00000446612 PAK3O75914 559 aaPredicted RBP13.25□□□□□ -0.29
NUP35-205ENST00000446612 PELP1Q8IZL8 1130 aaKnown RBP13.24□□□□□ -0.29
NUP35-205ENST00000446612 POTEB2H3BUK9 544 aa13.23□□□□□ -0.29
NUP35-205ENST00000446612 MS4A3Q96HJ5 214 aa13.21□□□□□ -0.29
NUP35-205ENST00000446612 CCDC61Q9Y6R9 512 aa13.2□□□□□ -0.3
NUP35-205ENST00000446612 ASTLQ6HA08 431 aaPredicted RBP13.16□□□□□ -0.3
NUP35-205ENST00000446612 OTUD5Q96G74 571 aa13.14□□□□□ -0.31
NUP35-205ENST00000446612 ATMINO43313 823 aaPredicted RBP13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 94.4 ms