RNA–Protein interactions for RNA: ENST00000339217.8

TCEA2-201, Transcript of transcription elongation factor A2, humanhuman

TSL 3

Gene TCEA2, Length 953 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCEA2-201ENST00000339217 NISCHQ9Y2I1 1504 aa64.88■■■■■ 7.98
TCEA2-201ENST00000339217 CCDC180Q9P1Z9 1646 aa57.98■■■■■ 6.87
TCEA2-201ENST00000339217 ABCC9O60706 1549 aa57.05■■■■■ 6.72
TCEA2-201ENST00000339217 RB1CC1Q8TDY2 1594 aa54.76■■■■■ 6.36
TCEA2-201ENST00000339217 NACADO15069 1562 aa54.6■■■■■ 6.33
TCEA2-201ENST00000339217 MYO15BQ96JP2 1530 aa54.2■■■■■ 6.27
TCEA2-201ENST00000339217 DCAF8L2P0C7V8 631 aa54.13■■■■■ 6.26
TCEA2-201ENST00000339217 ZCCHC6Q5VYS8 1495 aaKnown RBP53.96■■■■■ 6.23
TCEA2-201ENST00000339217 DCAF1Q9Y4B6 1507 aa53.75■■■■■ 6.2
TCEA2-201ENST00000339217 UNC13AQ9UPW8 1703 aa53.54■■■■■ 6.16
TCEA2-201ENST00000339217 PABPN1Q86U42 306 aaKnown RBP eCLIP53.16■■■■■ 6.1
TCEA2-201ENST00000339217 BICRAQ9NZM4 1560 aa53.15■■■■■ 6.1
TCEA2-201ENST00000339217 DNAJC5BQ9UF47 199 aa52.86■■■■■ 6.05
TCEA2-201ENST00000339217 SCRIBQ14160 1630 aa52.71■■■■■ 6.03
TCEA2-201ENST00000339217 SHROOM4Q9ULL8 1493 aa52.63■■■■■ 6.02
TCEA2-201ENST00000339217 EIF4G1Q04637 1599 aaKnown RBP51.76■■■■■ 5.88
TCEA2-201ENST00000339217 CC2D2AQ9P2K1 1620 aa51.66■■■■■ 5.86
TCEA2-201ENST00000339217 CECR2Q9BXF3 1484 aa51.36■■■■■ 5.81
TCEA2-201ENST00000339217 SMARCA4P51532 1647 aa50.45■■■■■ 5.67
TCEA2-201ENST00000339217 NCAPD3P42695 1498 aa50.39■■■■■ 5.66
TCEA2-201ENST00000339217 BAZ1AQ9NRL2 1556 aaPredicted RBP50.32■■■■■ 5.65
TCEA2-201ENST00000339217 ATAD2BQ9ULI0 1458 aa50.3■■■■■ 5.64
TCEA2-201ENST00000339217 SMARCA2P51531 1590 aa50.23■■■■■ 5.63
TCEA2-201ENST00000339217 HMGXB3Q12766 1538 aa50.11■■■■■ 5.61
TCEA2-201ENST00000339217 PEG3Q9GZU2 1588 aa50.05■■■■■ 5.6
TCEA2-201ENST00000339217 MROH2BQ7Z745 1585 aa49.96■■■■■ 5.59
TCEA2-201ENST00000339217 BAZ1BQ9UIG0 1483 aaKnown RBP49.82■■■■■ 5.57
TCEA2-201ENST00000339217 WIZO95785 1651 aa49.38■■■■■ 5.5
TCEA2-201ENST00000339217 NESP48681 1621 aa49.24■■■■■ 5.47
TCEA2-201ENST00000339217 ERCC6Q03468 1493 aa49.2■■■■■ 5.47
TCEA2-201ENST00000339217 RSF1Q96T23 1441 aaPredicted RBP49.2■■■■■ 5.47
TCEA2-201ENST00000339217 LAMC3Q9Y6N6 1575 aa49.14■■■■■ 5.46
TCEA2-201ENST00000339217 CUX2O14529 1486 aa49■■■■■ 5.44
TCEA2-201ENST00000339217 TOP2AP11388 1531 aaKnown RBP48.87■■■■■ 5.41
TCEA2-201ENST00000339217 CADPSQ9ULU8 1353 aa48.84■■■■■ 5.41
TCEA2-201ENST00000339217 PDS5BQ9NTI5 1447 aa48.77■■■■■ 5.4
TCEA2-201ENST00000339217 THOC2Q8NI27 1593 aaKnown RBP48.71■■■■■ 5.39
TCEA2-201ENST00000339217 KIF21AQ7Z4S6 1674 aa48.69■■■■■ 5.39
TCEA2-201ENST00000339217 CFTRP13569 1480 aa48.48■■■■■ 5.35
TCEA2-201ENST00000339217 MRC2Q9UBG0 1479 aa48.31■■■■■ 5.32
TCEA2-201ENST00000339217 FANCD2Q9BXW9 1451 aa48.26■■■■■ 5.32
TCEA2-201ENST00000339217 CCDC88BA6NC98 1476 aa48.25■■■■■ 5.31
TCEA2-201ENST00000339217 CEP164Q9UPV0 1460 aa48.25■■■■■ 5.31
TCEA2-201ENST00000339217 WDR62O43379 1518 aa48.22■■■■■ 5.31
TCEA2-201ENST00000339217 PRDM2Q13029 1718 aa48.11■■■■■ 5.29
TCEA2-201ENST00000339217 DNAJC5Q9H3Z4 198 aa48.05■■■■■ 5.28
TCEA2-201ENST00000339217 URB2Q14146 1524 aaKnown RBP47.83■■■■■ 5.25
TCEA2-201ENST00000339217 TOPBP1Q92547 1522 aa47.46■■■■■ 5.19
TCEA2-201ENST00000339217 ABCC8Q09428 1581 aa47.45■■■■■ 5.19
TCEA2-201ENST00000339217 DNMBPQ6XZF7 1577 aa47.37■■■■■ 5.17
TCEA2-201ENST00000339217 SUPT5HO00267 1087 aaKnown RBP47.35■■■■■ 5.17
TCEA2-201ENST00000339217 IFT140Q96RY7 1462 aa47.29■■■■■ 5.16
TCEA2-201ENST00000339217 ZNF608Q9ULD9 1512 aaPredicted RBP47.09■■■■■ 5.13
TCEA2-201ENST00000339217 TARBP1Q13395 1621 aaKnown RBP47.02■■■■■ 5.12
TCEA2-201ENST00000339217 POLA1P09884 1462 aaPredicted RBP47.02■■■■■ 5.12
TCEA2-201ENST00000339217 EIF4G3O43432 1585 aaKnown RBP46.91■■■■■ 5.1
TCEA2-201ENST00000339217 CUX1P39880 1505 aa46.89■■■■■ 5.1
TCEA2-201ENST00000339217 FGD5Q6ZNL6 1462 aa46.8■■■■■ 5.08
TCEA2-201ENST00000339217 OSCARQ8IYS5 282 aa46.77■■■■■ 5.08
TCEA2-201ENST00000339217 SOGA1O94964 1423 aa46.77■■■■■ 5.08
TCEA2-201ENST00000339217 RAD54L2Q9Y4B4 1467 aa46.76■■■■■ 5.08
TCEA2-201ENST00000339217 AQRO60306 1485 aaKnown RBP eCLIP46.73■■■■■ 5.07
TCEA2-201ENST00000339217 WDR97A6NE52 1622 aa46.68■■■■■ 5.06
TCEA2-201ENST00000339217 TDRD9Q8NDG6 1382 aaKnown RBP46.53■■■■■ 5.04
TCEA2-201ENST00000339217 CHD1O14646 1710 aa46.41■■■■■ 5.02
TCEA2-201ENST00000339217 BIVM-ERCC5R4GMW8 1640 aa46.41■■■■■ 5.02
TCEA2-201ENST00000339217 TOP2BQ02880 1626 aa46.39■■■■■ 5.02
TCEA2-201ENST00000339217 ABCA10Q8WWZ4 1543 aa46.38■■■■■ 5.02
TCEA2-201ENST00000339217 WRNQ14191 1432 aaPredicted RBP eCLIP46.37■■■■■ 5.01
TCEA2-201ENST00000339217 GRIN2BQ13224 1484 aa46.32■■■■■ 5.01
TCEA2-201ENST00000339217 SYNJ1O43426 1573 aa46.31■■■■■ 5
TCEA2-201ENST00000339217 SNAPC4Q5SXM2 1469 aa46.3■■■■■ 5
TCEA2-201ENST00000339217 MAGI1Q96QZ7 1491 aaPredicted RBP46.29■■■■■ 5
TCEA2-201ENST00000339217 ABCA5Q8WWZ7 1642 aa46.25■■■■■ 4.99
TCEA2-201ENST00000339217 GAPVD1Q14C86 1478 aa46.24■■■■■ 4.99
TCEA2-201ENST00000339217 PBRM1Q86U86 1689 aa46.2■■■■■ 4.99
TCEA2-201ENST00000339217 FBLN2P98095 1184 aa46.14■■■■■ 4.98
TCEA2-201ENST00000339217 RIMBP3CA6NJZ7 1639 aa46.14■■■■■ 4.98
TCEA2-201ENST00000339217 RIMBP3BA6NNM3 1639 aa46.14■■■■■ 4.98
TCEA2-201ENST00000339217 RIMBP3Q9UFD9 1639 aa46.14■■■■■ 4.98
TCEA2-201ENST00000339217 SYNJ2O15056 1496 aa46.1■■■■■ 4.97
TCEA2-201ENST00000339217 ARHGEF11O15085 1522 aa46.08■■■■■ 4.97
TCEA2-201ENST00000339217 TRIM41Q8WV44 630 aa46.06■■■■■ 4.96
TCEA2-201ENST00000339217 CHMP7Q8WUX9 453 aaPredicted RBP46.01■■■■■ 4.96
TCEA2-201ENST00000339217 CLASP1Q7Z460 1538 aa45.96■■■■■ 4.95
TCEA2-201ENST00000339217 ADAMTS12P58397 1594 aa45.83■■■■■ 4.93
TCEA2-201ENST00000339217 ERICH3Q5RHP9 1530 aa45.82■■■■■ 4.93
TCEA2-201ENST00000339217 GRIN2AQ12879 1464 aa45.73■■■■■ 4.91
TCEA2-201ENST00000339217 FHAD1B1AJZ9 1412 aa45.7■■■■■ 4.91
TCEA2-201ENST00000339217 ARAP1Q96P48 1450 aa45.68■■■■■ 4.9
TCEA2-201ENST00000339217 NUP160Q12769 1436 aa45.59■■■■■ 4.89
TCEA2-201ENST00000339217 CYB5RLQ6IPT4 315 aa45.55■■■■■ 4.88
TCEA2-201ENST00000339217 CEP170Q5SW79 1584 aa45.54■■■■■ 4.88
TCEA2-201ENST00000339217 KIF27Q86VH2 1401 aa45.44■■■■■ 4.87
TCEA2-201ENST00000339217 IGF1RP08069 1367 aa45.34■■■■■ 4.85
TCEA2-201ENST00000339217 SHROOM2Q13796 1616 aa45.34■■■■■ 4.85
TCEA2-201ENST00000339217 CUL7Q14999 1698 aa45.3■■■■■ 4.84
TCEA2-201ENST00000339217 ERCC6L2Q5T890 1561 aa45.2■■■■■ 4.83
TCEA2-201ENST00000339217 RUSC2Q8N2Y8 1516 aa45.17■■■■■ 4.82
TCEA2-201ENST00000339217 CARMIL1Q5VZK9 1371 aa45.03■■■■■ 4.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms