RNA–Protein interactions for RNA: ENST00000479162.5

NUP35-209, Transcript of nucleoporin 35, humanhuman

TSL 2

Gene NUP35, Length 2,828 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-209ENST00000479162 NISCHQ9Y2I1 1504 aa19.53■□□□□ 0.72
NUP35-209ENST00000479162 PELP1Q8IZL8 1130 aaKnown RBP19.3■□□□□ 0.68
NUP35-209ENST00000479162 MYT1Q01538 1121 aa19.13■□□□□ 0.65
NUP35-209ENST00000479162 TTBK1Q5TCY1 1321 aaPredicted RBP18.49■□□□□ 0.55
NUP35-209ENST00000479162 PRKCSHP14314 528 aaPredicted RBP18.02■□□□□ 0.47
NUP35-209ENST00000479162 SLC24A1O60721 1099 aa17.92■□□□□ 0.46
NUP35-209ENST00000479162 ERICH6Q7L0X2 663 aa17.76■□□□□ 0.43
NUP35-209ENST00000479162 APLP2Q06481 763 aa17.66■□□□□ 0.42
NUP35-209ENST00000479162 CCDC180Q9P1Z9 1646 aa17.63■□□□□ 0.41
NUP35-209ENST00000479162 BCL11AQ9H165 835 aa17.39■□□□□ 0.38
NUP35-209ENST00000479162 HRCP23327 699 aa17.34■□□□□ 0.37
NUP35-209ENST00000479162 SCAF1Q9H7N4 1312 aaKnown RBP17.2■□□□□ 0.34
NUP35-209ENST00000479162 FAM9AQ8IZU1 332 aaPredicted RBP17.12■□□□□ 0.33
NUP35-209ENST00000479162 DAXXQ9UER7 740 aaPredicted RBP17.09■□□□□ 0.33
NUP35-209ENST00000479162 CENPBP07199 599 aaPredicted RBP16.78■□□□□ 0.28
NUP35-209ENST00000479162 PPARGC1BQ86YN6 1023 aaKnown RBP16.71■□□□□ 0.27
NUP35-209ENST00000479162 EIF5BO60841 1220 aaKnown RBP16.68■□□□□ 0.26
NUP35-209ENST00000479162 MYO15BQ96JP2 1530 aa16.55■□□□□ 0.24
NUP35-209ENST00000479162 DCAF1Q9Y4B6 1507 aa16.47■□□□□ 0.23
NUP35-209ENST00000479162 ABCC9O60706 1549 aa16.45■□□□□ 0.22
NUP35-209ENST00000479162 NACADO15069 1562 aa16.39■□□□□ 0.21
NUP35-209ENST00000479162 ACIN1Q9UKV3 1341 aaKnown RBP16.38■□□□□ 0.21
NUP35-209ENST00000479162 ZCCHC6Q5VYS8 1495 aaKnown RBP16.37■□□□□ 0.21
NUP35-209ENST00000479162 ANP32EQ9BTT0 268 aa16.37■□□□□ 0.21
NUP35-209ENST00000479162 RB1CC1Q8TDY2 1594 aa16.3■□□□□ 0.2
NUP35-209ENST00000479162 GTF3C3Q9Y5Q9 886 aa16.27■□□□□ 0.19
NUP35-209ENST00000479162 PLEKHG5O94827 1062 aa16.23■□□□□ 0.19
NUP35-209ENST00000479162 UBE2Q2Q8WVN8 375 aa16.21■□□□□ 0.19
NUP35-209ENST00000479162 NEUROD1Q13562 356 aa16.16■□□□□ 0.18
NUP35-209ENST00000479162 CSRNP3Q8WYN3 585 aa16.14■□□□□ 0.17
NUP35-209ENST00000479162 PCGF6Q9BYE7 350 aa16.11■□□□□ 0.17
NUP35-209ENST00000479162 ANO8Q9HCE9 1232 aaPredicted RBP16.05■□□□□ 0.16
NUP35-209ENST00000479162 PODXL2Q9NZ53 605 aa16.03■□□□□ 0.16
NUP35-209ENST00000479162 ZEB1P37275 1124 aaPredicted RBP16■□□□□ 0.15
NUP35-209ENST00000479162 SHROOM4Q9ULL8 1493 aa15.98■□□□□ 0.15
NUP35-209ENST00000479162 UNC13AQ9UPW8 1703 aa15.95■□□□□ 0.14
NUP35-209ENST00000479162 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
NUP35-209ENST00000479162 NCBP3Q53F19 620 aaKnown RBP15.82■□□□□ 0.12
NUP35-209ENST00000479162 BICRAQ9NZM4 1560 aa15.76■□□□□ 0.11
NUP35-209ENST00000479162 RANGAP1P46060 587 aaPredicted RBP15.65■□□□□ 0.1
NUP35-209ENST00000479162 SALL2Q9Y467 1007 aaPredicted RBP15.65■□□□□ 0.1
NUP35-209ENST00000479162 SCRIBQ14160 1630 aa15.62■□□□□ 0.09
NUP35-209ENST00000479162 ERICH6BQ5W0A0 696 aa15.59■□□□□ 0.09
NUP35-209ENST00000479162 CCDC136Q96JN2 1154 aa15.58■□□□□ 0.08
NUP35-209ENST00000479162 ARXQ96QS3 562 aa15.58■□□□□ 0.08
NUP35-209ENST00000479162 KLHL34Q8N239 644 aa15.56■□□□□ 0.08
NUP35-209ENST00000479162 NEFLP07196 543 aa15.55■□□□□ 0.08
NUP35-209ENST00000479162 TSHZ2Q9NRE2 1034 aa15.48■□□□□ 0.07
NUP35-209ENST00000479162 PDIA4P13667 645 aaKnown RBP15.46■□□□□ 0.07
NUP35-209ENST00000479162 DCAF8L2P0C7V8 631 aa15.46■□□□□ 0.07
NUP35-209ENST00000479162 MYT1LQ9UL68 1186 aa15.44■□□□□ 0.06
NUP35-209ENST00000479162 PDE4CQ08493 712 aa15.43■□□□□ 0.06
NUP35-209ENST00000479162 TRIM26Q12899 539 aaPredicted RBP15.3■□□□□ 0.04
NUP35-209ENST00000479162 TIMELESSQ9UNS1 1208 aa15.29■□□□□ 0.04
NUP35-209ENST00000479162 CLSPNQ9HAW4 1339 aa15.28■□□□□ 0.04
NUP35-209ENST00000479162 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.28■□□□□ 0.04
NUP35-209ENST00000479162 EIF4G1Q04637 1599 aaKnown RBP15.28■□□□□ 0.04
NUP35-209ENST00000479162 DEKP35659 375 aaKnown RBP15.24■□□□□ 0.03
NUP35-209ENST00000479162 AEBP2Q6ZN18 517 aaPredicted RBP15.24■□□□□ 0.03
NUP35-209ENST00000479162 FGD1P98174 961 aa15.23■□□□□ 0.03
NUP35-209ENST00000479162 DIEXFQ68CQ4 756 aaKnown RBP15.23■□□□□ 0.03
NUP35-209ENST00000479162 CHIC1Q5VXU3 224 aa15.22■□□□□ 0.03
NUP35-209ENST00000479162 PLPPR3Q6T4P5 718 aa15.21■□□□□ 0.03
NUP35-209ENST00000479162 PEG3Q9GZU2 1588 aa15.21■□□□□ 0.03
NUP35-209ENST00000479162 RTN4Q9NQC3 1192 aaKnown RBP15.21■□□□□ 0.03
NUP35-209ENST00000479162 BAZ1AQ9NRL2 1556 aaPredicted RBP15.18■□□□□ 0.02
NUP35-209ENST00000479162 PABPN1Q86U42 306 aaKnown RBP eCLIP15.17■□□□□ 0.02
NUP35-209ENST00000479162 SMARCA4P51532 1647 aa15.17■□□□□ 0.02
NUP35-209ENST00000479162 GLIPR1L2Q4G1C9 344 aa15.16■□□□□ 0.02
NUP35-209ENST00000479162 BCL11BQ9C0K0 894 aaPredicted RBP15.16■□□□□ 0.02
NUP35-209ENST00000479162 CC2D2AQ9P2K1 1620 aa15.14■□□□□ 0.01
NUP35-209ENST00000479162 SUPT16HQ9Y5B9 1047 aaKnown RBP15.13■□□□□ 0.01
NUP35-209ENST00000479162 A0A0U1RQG5 324 aaPredicted RBP15.11■□□□□ 0.01
NUP35-209ENST00000479162 TAF7LQ5H9L4 462 aa15.11■□□□□ 0.01
NUP35-209ENST00000479162 HMGXB3Q12766 1538 aa15.09■□□□□ 0.01
NUP35-209ENST00000479162 SMARCA2P51531 1590 aa15.09■□□□□ 0.01
NUP35-209ENST00000479162 AAMPQ13685 434 aa15.07■□□□□ 0
NUP35-209ENST00000479162 ZMYND15Q9H091 742 aa15.07■□□□□ 0
NUP35-209ENST00000479162 YTHDC1Q96MU7 727 aaKnown RBP15.06■□□□□ 0
NUP35-209ENST00000479162 HOMEZQ8IX15 550 aa15.03■□□□□ -0
NUP35-209ENST00000479162 NCAPD3P42695 1498 aa15.02■□□□□ -0
NUP35-209ENST00000479162 RBM10P98175 930 aaKnown RBP14.98□□□□□ -0.01
NUP35-209ENST00000479162 TULP1O00294 542 aaPredicted RBP14.98□□□□□ -0.01
NUP35-209ENST00000479162 RBM19Q9Y4C8 960 aaKnown RBP14.98□□□□□ -0.01
NUP35-209ENST00000479162 CECR2Q9BXF3 1484 aa14.96□□□□□ -0.01
NUP35-209ENST00000479162 ATAD2BQ9ULI0 1458 aa14.95□□□□□ -0.02
NUP35-209ENST00000479162 MSH5O43196 834 aa14.95□□□□□ -0.02
NUP35-209ENST00000479162 VSIG10Q8N0Z9 540 aa14.93□□□□□ -0.02
NUP35-209ENST00000479162 MROH2BQ7Z745 1585 aa14.92□□□□□ -0.02
NUP35-209ENST00000479162 EHMT2Q96KQ7 1210 aa14.92□□□□□ -0.02
NUP35-209ENST00000479162 IL27Q8NEV9 243 aa14.91□□□□□ -0.02
NUP35-209ENST00000479162 RSPH6AQ9H0K4 717 aa14.87□□□□□ -0.03
NUP35-209ENST00000479162 TOP2AP11388 1531 aaKnown RBP14.82□□□□□ -0.04
NUP35-209ENST00000479162 DNAJC5BQ9UF47 199 aa14.82□□□□□ -0.04
NUP35-209ENST00000479162 FANCIQ9NVI1 1328 aa14.81□□□□□ -0.04
NUP35-209ENST00000479162 CHMP4AQ9BY43 222 aa14.8□□□□□ -0.04
NUP35-209ENST00000479162 RSF1Q96T23 1441 aaPredicted RBP14.8□□□□□ -0.04
NUP35-209ENST00000479162 BRD2P25440 801 aaKnown RBP14.79□□□□□ -0.04
NUP35-209ENST00000479162 BAZ1BQ9UIG0 1483 aaKnown RBP14.79□□□□□ -0.04
NUP35-209ENST00000479162 DHX37Q8IY37 1157 aaKnown RBP14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 75.6 ms