RNA–Protein interactions for RNA: ENST00000453386.6

TRA2B-205, Transcript of transformer 2 beta homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRA2B, Length 2,952 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-205ENST00000453386 NISCHQ9Y2I1 1504 aa31.47■■■□□ 2.63
TRA2B-205ENST00000453386 SHROOM4Q9ULL8 1493 aa27.37■■□□□ 1.97
TRA2B-205ENST00000453386 SUPT5HO00267 1087 aaKnown RBP27.04■■□□□ 1.92
TRA2B-205ENST00000453386 ZCCHC6Q5VYS8 1495 aaKnown RBP26.64■■□□□ 1.86
TRA2B-205ENST00000453386 CCDC180Q9P1Z9 1646 aa26.42■■□□□ 1.82
TRA2B-205ENST00000453386 DCAF8L2P0C7V8 631 aa26.41■■□□□ 1.82
TRA2B-205ENST00000453386 CHIC1Q5VXU3 224 aa26.32■■□□□ 1.8
TRA2B-205ENST00000453386 MYO15BQ96JP2 1530 aa26.22■■□□□ 1.79
TRA2B-205ENST00000453386 HRCP23327 699 aa26.08■■□□□ 1.77
TRA2B-205ENST00000453386 PCGF6Q9BYE7 350 aa25.96■■□□□ 1.75
TRA2B-205ENST00000453386 DCAF1Q9Y4B6 1507 aa25.69■■□□□ 1.7
TRA2B-205ENST00000453386 LOC105371045A0A1W2PR82 267 aa25.66■■□□□ 1.7
TRA2B-205ENST00000453386 PPARGC1BQ86YN6 1023 aaKnown RBP25.59■■□□□ 1.69
TRA2B-205ENST00000453386 TRIM26Q12899 539 aaPredicted RBP25.29■■□□□ 1.64
TRA2B-205ENST00000453386 ABCC9O60706 1549 aa25.18■■□□□ 1.62
TRA2B-205ENST00000453386 RSF1Q96T23 1441 aaPredicted RBP25.1■■□□□ 1.61
TRA2B-205ENST00000453386 TRIM41Q8WV44 630 aa25.1■■□□□ 1.61
TRA2B-205ENST00000453386 SCRIBQ14160 1630 aa25.05■■□□□ 1.6
TRA2B-205ENST00000453386 FAM9AQ8IZU1 332 aaPredicted RBP25.01■■□□□ 1.59
TRA2B-205ENST00000453386 EHMT2Q96KQ7 1210 aa24.88■■□□□ 1.57
TRA2B-205ENST00000453386 ZEB1P37275 1124 aaPredicted RBP24.87■■□□□ 1.57
TRA2B-205ENST00000453386 RB1CC1Q8TDY2 1594 aa24.84■■□□□ 1.57
TRA2B-205ENST00000453386 CECR2Q9BXF3 1484 aa24.62■■□□□ 1.53
TRA2B-205ENST00000453386 MROH2BQ7Z745 1585 aa24.53■■□□□ 1.52
TRA2B-205ENST00000453386 NACADO15069 1562 aa24.46■■□□□ 1.51
TRA2B-205ENST00000453386 WIZO95785 1651 aa24.39■■□□□ 1.49
TRA2B-205ENST00000453386 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP24.3■■□□□ 1.48
TRA2B-205ENST00000453386 CCER1Q8TC90 406 aaPredicted RBP24.27■■□□□ 1.48
TRA2B-205ENST00000453386 SCAF1Q9H7N4 1312 aaKnown RBP24.27■■□□□ 1.48
TRA2B-205ENST00000453386 BAZ1AQ9NRL2 1556 aaPredicted RBP24.19■■□□□ 1.46
TRA2B-205ENST00000453386 TTBK1Q5TCY1 1321 aaPredicted RBP24.15■■□□□ 1.46
TRA2B-205ENST00000453386 PELP1Q8IZL8 1130 aaKnown RBP24.12■■□□□ 1.45
TRA2B-205ENST00000453386 EIF4G1Q04637 1599 aaKnown RBP24.06■■□□□ 1.44
TRA2B-205ENST00000453386 ABCC8Q09428 1581 aa24.03■■□□□ 1.44
TRA2B-205ENST00000453386 CCDC88BA6NC98 1476 aa24.02■■□□□ 1.44
TRA2B-205ENST00000453386 TOP2AP11388 1531 aaKnown RBP23.96■■□□□ 1.43
TRA2B-205ENST00000453386 CEP162Q5TB80 1403 aa23.95■■□□□ 1.42
TRA2B-205ENST00000453386 DIEXFQ68CQ4 756 aaKnown RBP23.94■■□□□ 1.42
TRA2B-205ENST00000453386 ACIN1Q9UKV3 1341 aaKnown RBP23.93■■□□□ 1.42
TRA2B-205ENST00000453386 SOGA1O94964 1423 aa23.92■■□□□ 1.42
TRA2B-205ENST00000453386 WRNQ14191 1432 aaPredicted RBP eCLIP23.92■■□□□ 1.42
TRA2B-205ENST00000453386 UBTFP17480 764 aaKnown RBP23.91■■□□□ 1.42
TRA2B-205ENST00000453386 NEUROD1Q13562 356 aa23.89■■□□□ 1.42
TRA2B-205ENST00000453386 CSRNP3Q8WYN3 585 aa23.87■■□□□ 1.41
TRA2B-205ENST00000453386 SMARCA4P51532 1647 aa23.86■■□□□ 1.41
TRA2B-205ENST00000453386 TNIKQ9UKE5 1360 aa23.86■■□□□ 1.41
TRA2B-205ENST00000453386 SMARCA2P51531 1590 aa23.85■■□□□ 1.41
TRA2B-205ENST00000453386 CENPBP07199 599 aaPredicted RBP23.78■■□□□ 1.4
TRA2B-205ENST00000453386 RUSC2Q8N2Y8 1516 aa23.77■■□□□ 1.4
TRA2B-205ENST00000453386 EEA1Q15075 1411 aa23.74■■□□□ 1.39
TRA2B-205ENST00000453386 GTF3C3Q9Y5Q9 886 aa23.71■■□□□ 1.39
TRA2B-205ENST00000453386 GOLGA3Q08378 1498 aa23.65■■□□□ 1.38
TRA2B-205ENST00000453386 ZNF316A6NFI3 1004 aaPredicted RBP23.64■■□□□ 1.37
TRA2B-205ENST00000453386 PABPN1Q86U42 306 aaKnown RBP eCLIP23.64■■□□□ 1.37
TRA2B-205ENST00000453386 HNRNPUL2Q1KMD3 747 aaKnown RBP23.59■■□□□ 1.37
TRA2B-205ENST00000453386 UNC13AQ9UPW8 1703 aa23.57■■□□□ 1.36
TRA2B-205ENST00000453386 YTHDC1Q96MU7 727 aaKnown RBP23.49■■□□□ 1.35
TRA2B-205ENST00000453386 CEP164Q9UPV0 1460 aa23.47■■□□□ 1.35
TRA2B-205ENST00000453386 RANGAP1P46060 587 aaPredicted RBP23.46■■□□□ 1.35
TRA2B-205ENST00000453386 APLP2Q06481 763 aa23.46■■□□□ 1.35
TRA2B-205ENST00000453386 CLIP1P30622 1438 aa23.45■■□□□ 1.34
TRA2B-205ENST00000453386 SYNJ1O43426 1573 aa23.39■■□□□ 1.33
TRA2B-205ENST00000453386 MIER1Q8N108 512 aa23.38■■□□□ 1.33
TRA2B-205ENST00000453386 VPS8Q8N3P4 1428 aa23.35■■□□□ 1.33
TRA2B-205ENST00000453386 KIF21BO75037 1637 aa23.34■■□□□ 1.33
TRA2B-205ENST00000453386 BICRAQ9NZM4 1560 aa23.33■■□□□ 1.33
TRA2B-205ENST00000453386 PEG3Q9GZU2 1588 aa23.3■■□□□ 1.32
TRA2B-205ENST00000453386 RAPGEF2Q9Y4G8 1499 aa23.29■■□□□ 1.32
TRA2B-205ENST00000453386 ATAD2BQ9ULI0 1458 aa23.24■■□□□ 1.31
TRA2B-205ENST00000453386 BAZ1BQ9UIG0 1483 aaKnown RBP23.24■■□□□ 1.31
TRA2B-205ENST00000453386 TOP2BQ02880 1626 aa23.03■■□□□ 1.28
TRA2B-205ENST00000453386 KANK4Q5T7N3 995 aaPredicted RBP23.03■■□□□ 1.28
TRA2B-205ENST00000453386 DHX57Q6P158 1386 aaKnown RBP23.01■■□□□ 1.27
TRA2B-205ENST00000453386 CLSPNQ9HAW4 1339 aa23.01■■□□□ 1.27
TRA2B-205ENST00000453386 MYT1Q01538 1121 aa22.95■■□□□ 1.27
TRA2B-205ENST00000453386 PRXQ9BXM0 1461 aa22.95■■□□□ 1.27
TRA2B-205ENST00000453386 ARAP1Q96P48 1450 aa22.95■■□□□ 1.26
TRA2B-205ENST00000453386 ERICH3Q5RHP9 1530 aa22.92■■□□□ 1.26
TRA2B-205ENST00000453386 ITGAEP38570 1179 aa22.89■■□□□ 1.25
TRA2B-205ENST00000453386 BIVM-ERCC5R4GMW8 1640 aa22.88■■□□□ 1.25
TRA2B-205ENST00000453386 KIF27Q86VH2 1401 aa22.84■■□□□ 1.25
TRA2B-205ENST00000453386 RRBP1Q9P2E9 1410 aaKnown RBP22.82■■□□□ 1.24
TRA2B-205ENST00000453386 CCNB3Q8WWL7 1395 aa22.79■■□□□ 1.24
TRA2B-205ENST00000453386 CUX1P39880 1505 aa22.79■■□□□ 1.24
TRA2B-205ENST00000453386 SUPT16HQ9Y5B9 1047 aaKnown RBP22.72■■□□□ 1.23
TRA2B-205ENST00000453386 ARHGAP35Q9NRY4 1499 aa22.72■■□□□ 1.23
TRA2B-205ENST00000453386 NCAPD3P42695 1498 aa22.69■■□□□ 1.22
TRA2B-205ENST00000453386 CUX2O14529 1486 aa22.67■■□□□ 1.22
TRA2B-205ENST00000453386 RAB3GAP2Q9H2M9 1393 aa22.64■■□□□ 1.22
TRA2B-205ENST00000453386 HMGXB3Q12766 1538 aa22.64■■□□□ 1.21
TRA2B-205ENST00000453386 CFTRP13569 1480 aa22.62■■□□□ 1.21
TRA2B-205ENST00000453386 KCNH8Q96L42 1107 aa22.58■■□□□ 1.21
TRA2B-205ENST00000453386 IGF1RP08069 1367 aa22.57■■□□□ 1.2
TRA2B-205ENST00000453386 FAM50AQ14320 339 aaKnown RBP22.56■■□□□ 1.2
TRA2B-205ENST00000453386 ATP1B4Q9UN42 357 aaPredicted RBP22.53■■□□□ 1.2
TRA2B-205ENST00000453386 SETD5Q9C0A6 1442 aa22.52■■□□□ 1.2
TRA2B-205ENST00000453386 SIN3AQ96ST3 1273 aa22.51■■□□□ 1.19
TRA2B-205ENST00000453386 CARMIL1Q5VZK9 1371 aa22.51■■□□□ 1.19
TRA2B-205ENST00000453386 MAPKBP1O60336 1514 aa22.5■■□□□ 1.19
TRA2B-205ENST00000453386 P3H3Q8IVL6 736 aa22.5■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 85.4 ms