RNA–Protein interactions for RNA: ENST00000525774.5

LRRC8D-205, Transcript of leucine rich repeat containing 8 VRAC subunit D, humanhuman

TSL 4

Gene LRRC8D, Length 588 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC8D-205ENST00000525774 NISCHQ9Y2I1 1504 aa59.5■■■■■ 7.12
LRRC8D-205ENST00000525774 CCDC180Q9P1Z9 1646 aa53.06■■■■■ 6.08
LRRC8D-205ENST00000525774 ABCC9O60706 1549 aa52.18■■■■■ 5.94
LRRC8D-205ENST00000525774 RB1CC1Q8TDY2 1594 aa50.09■■■■■ 5.61
LRRC8D-205ENST00000525774 NACADO15069 1562 aa50■■■■■ 5.59
LRRC8D-205ENST00000525774 MYO15BQ96JP2 1530 aa49.7■■■■■ 5.55
LRRC8D-205ENST00000525774 DCAF8L2P0C7V8 631 aa49.59■■■■■ 5.53
LRRC8D-205ENST00000525774 ZCCHC6Q5VYS8 1495 aaKnown RBP49.5■■■■■ 5.52
LRRC8D-205ENST00000525774 DCAF1Q9Y4B6 1507 aa49.31■■■■■ 5.48
LRRC8D-205ENST00000525774 UNC13AQ9UPW8 1703 aa48.92■■■■■ 5.42
LRRC8D-205ENST00000525774 PABPN1Q86U42 306 aaKnown RBP eCLIP48.67■■■■■ 5.38
LRRC8D-205ENST00000525774 BICRAQ9NZM4 1560 aa48.67■■■■■ 5.38
LRRC8D-205ENST00000525774 DNAJC5BQ9UF47 199 aa48.35■■■■■ 5.33
LRRC8D-205ENST00000525774 SCRIBQ14160 1630 aa48.25■■■■■ 5.32
LRRC8D-205ENST00000525774 SHROOM4Q9ULL8 1493 aa48.18■■■■■ 5.3
LRRC8D-205ENST00000525774 EIF4G1Q04637 1599 aaKnown RBP47.36■■■■■ 5.17
LRRC8D-205ENST00000525774 CC2D2AQ9P2K1 1620 aa47.23■■■■■ 5.15
LRRC8D-205ENST00000525774 CECR2Q9BXF3 1484 aa46.97■■■■■ 5.11
LRRC8D-205ENST00000525774 SMARCA4P51532 1647 aa46.21■■■■■ 4.99
LRRC8D-205ENST00000525774 NCAPD3P42695 1498 aa46.19■■■■■ 4.99
LRRC8D-205ENST00000525774 BAZ1AQ9NRL2 1556 aaPredicted RBP46.12■■■■■ 4.97
LRRC8D-205ENST00000525774 ATAD2BQ9ULI0 1458 aa46.11■■■■■ 4.97
LRRC8D-205ENST00000525774 SMARCA2P51531 1590 aa46.01■■■■■ 4.96
LRRC8D-205ENST00000525774 HMGXB3Q12766 1538 aa45.89■■■■■ 4.94
LRRC8D-205ENST00000525774 PEG3Q9GZU2 1588 aa45.88■■■■■ 4.94
LRRC8D-205ENST00000525774 MROH2BQ7Z745 1585 aa45.82■■■■■ 4.93
LRRC8D-205ENST00000525774 BAZ1BQ9UIG0 1483 aaKnown RBP45.62■■■■■ 4.89
LRRC8D-205ENST00000525774 WIZO95785 1651 aa45.24■■■■■ 4.83
LRRC8D-205ENST00000525774 RSF1Q96T23 1441 aaPredicted RBP45.18■■■■■ 4.82
LRRC8D-205ENST00000525774 NESP48681 1621 aa45.08■■■■■ 4.81
LRRC8D-205ENST00000525774 ERCC6Q03468 1493 aa44.97■■■■■ 4.79
LRRC8D-205ENST00000525774 LAMC3Q9Y6N6 1575 aa44.95■■■■■ 4.79
LRRC8D-205ENST00000525774 TOP2AP11388 1531 aaKnown RBP44.8■■■■■ 4.76
LRRC8D-205ENST00000525774 CUX2O14529 1486 aa44.78■■■■■ 4.76
LRRC8D-205ENST00000525774 CADPSQ9ULU8 1353 aa44.76■■■■■ 4.76
LRRC8D-205ENST00000525774 PDS5BQ9NTI5 1447 aa44.65■■■■■ 4.74
LRRC8D-205ENST00000525774 THOC2Q8NI27 1593 aaKnown RBP44.52■■■■■ 4.72
LRRC8D-205ENST00000525774 KIF21AQ7Z4S6 1674 aa44.49■■■■■ 4.71
LRRC8D-205ENST00000525774 CFTRP13569 1480 aa44.46■■■■■ 4.71
LRRC8D-205ENST00000525774 CCDC88BA6NC98 1476 aa44.27■■■■■ 4.68
LRRC8D-205ENST00000525774 MRC2Q9UBG0 1479 aa44.21■■■■■ 4.67
LRRC8D-205ENST00000525774 FANCD2Q9BXW9 1451 aa44.21■■■■■ 4.67
LRRC8D-205ENST00000525774 CEP164Q9UPV0 1460 aa44.16■■■■■ 4.66
LRRC8D-205ENST00000525774 WDR62O43379 1518 aa44.12■■■■■ 4.65
LRRC8D-205ENST00000525774 PRDM2Q13029 1718 aa43.97■■■■■ 4.63
LRRC8D-205ENST00000525774 DNAJC5Q9H3Z4 198 aa43.87■■■■■ 4.61
LRRC8D-205ENST00000525774 URB2Q14146 1524 aaKnown RBP43.82■■■■■ 4.61
LRRC8D-205ENST00000525774 SUPT5HO00267 1087 aaKnown RBP43.52■■■■■ 4.56
LRRC8D-205ENST00000525774 TOPBP1Q92547 1522 aa43.48■■■■■ 4.55
LRRC8D-205ENST00000525774 ABCC8Q09428 1581 aa43.47■■■■■ 4.55
LRRC8D-205ENST00000525774 DNMBPQ6XZF7 1577 aa43.38■■■■■ 4.54
LRRC8D-205ENST00000525774 IFT140Q96RY7 1462 aa43.31■■■■■ 4.52
LRRC8D-205ENST00000525774 ZNF608Q9ULD9 1512 aaPredicted RBP43.12■■■■■ 4.49
LRRC8D-205ENST00000525774 POLA1P09884 1462 aaPredicted RBP43.08■■■■■ 4.49
LRRC8D-205ENST00000525774 TARBP1Q13395 1621 aaKnown RBP43.06■■■■■ 4.48
LRRC8D-205ENST00000525774 CUX1P39880 1505 aa43.01■■■■■ 4.48
LRRC8D-205ENST00000525774 EIF4G3O43432 1585 aaKnown RBP42.9■■■■■ 4.46
LRRC8D-205ENST00000525774 FGD5Q6ZNL6 1462 aa42.88■■■■■ 4.46
LRRC8D-205ENST00000525774 SOGA1O94964 1423 aa42.87■■■■■ 4.45
LRRC8D-205ENST00000525774 RAD54L2Q9Y4B4 1467 aa42.86■■■■■ 4.45
LRRC8D-205ENST00000525774 AQRO60306 1485 aaKnown RBP eCLIP42.81■■■■■ 4.446e-6■■■■□ 23.2
LRRC8D-205ENST00000525774 OSCARQ8IYS5 282 aa42.79■■■■■ 4.44
LRRC8D-205ENST00000525774 WDR97A6NE52 1622 aa42.73■■■■■ 4.43
LRRC8D-205ENST00000525774 TDRD9Q8NDG6 1382 aaKnown RBP42.65■■■■■ 4.42
LRRC8D-205ENST00000525774 WRNQ14191 1432 aaPredicted RBP eCLIP42.56■■■■■ 4.41e-13■■■■■ 64
LRRC8D-205ENST00000525774 TOP2BQ02880 1626 aa42.53■■■■■ 4.4
LRRC8D-205ENST00000525774 BIVM-ERCC5R4GMW8 1640 aa42.53■■■■■ 4.4
LRRC8D-205ENST00000525774 ABCA10Q8WWZ4 1543 aa42.53■■■■■ 4.4
LRRC8D-205ENST00000525774 SYNJ1O43426 1573 aa42.47■■■■■ 4.39
LRRC8D-205ENST00000525774 GRIN2BQ13224 1484 aa42.44■■■■■ 4.38
LRRC8D-205ENST00000525774 SNAPC4Q5SXM2 1469 aa42.39■■■■■ 4.38
LRRC8D-205ENST00000525774 CHD1O14646 1710 aa42.39■■■■■ 4.38
LRRC8D-205ENST00000525774 MAGI1Q96QZ7 1491 aaPredicted RBP42.38■■■■■ 4.38
LRRC8D-205ENST00000525774 GAPVD1Q14C86 1478 aa42.37■■■■■ 4.37
LRRC8D-205ENST00000525774 ABCA5Q8WWZ7 1642 aa42.36■■■■■ 4.37
LRRC8D-205ENST00000525774 PBRM1Q86U86 1689 aa42.25■■■■■ 4.35
LRRC8D-205ENST00000525774 FBLN2P98095 1184 aa42.22■■■■■ 4.35
LRRC8D-205ENST00000525774 SYNJ2O15056 1496 aa42.22■■■■■ 4.35
LRRC8D-205ENST00000525774 RIMBP3CA6NJZ7 1639 aa42.13■■■■■ 4.34
LRRC8D-205ENST00000525774 RIMBP3BA6NNM3 1639 aa42.13■■■■■ 4.34
LRRC8D-205ENST00000525774 RIMBP3Q9UFD9 1639 aa42.13■■■■■ 4.34
LRRC8D-205ENST00000525774 CHMP7Q8WUX9 453 aaPredicted RBP42.13■■■■■ 4.33
LRRC8D-205ENST00000525774 ARHGEF11O15085 1522 aa42.12■■■■■ 4.33
LRRC8D-205ENST00000525774 CLASP1Q7Z460 1538 aa42.05■■■■■ 4.32
LRRC8D-205ENST00000525774 TRIM41Q8WV44 630 aa42.03■■■■■ 4.32
LRRC8D-205ENST00000525774 ERICH3Q5RHP9 1530 aa42■■■■■ 4.31
LRRC8D-205ENST00000525774 ADAMTS12P58397 1594 aa41.96■■■■■ 4.31
LRRC8D-205ENST00000525774 FHAD1B1AJZ9 1412 aa41.9■■■■■ 4.3
LRRC8D-205ENST00000525774 GRIN2AQ12879 1464 aa41.89■■■■■ 4.3
LRRC8D-205ENST00000525774 NUP160Q12769 1436 aa41.78■■■■■ 4.28
LRRC8D-205ENST00000525774 ARAP1Q96P48 1450 aa41.77■■■■■ 4.28
LRRC8D-205ENST00000525774 KIF27Q86VH2 1401 aa41.69■■■■■ 4.27
LRRC8D-205ENST00000525774 CEP170Q5SW79 1584 aa41.69■■■■■ 4.26
LRRC8D-205ENST00000525774 CYB5RLQ6IPT4 315 aa41.66■■■■■ 4.26
LRRC8D-205ENST00000525774 IGF1RP08069 1367 aa41.65■■■■■ 4.26
LRRC8D-205ENST00000525774 SHROOM2Q13796 1616 aa41.5■■■■■ 4.23
LRRC8D-205ENST00000525774 CUL7Q14999 1698 aa41.48■■■■■ 4.23
LRRC8D-205ENST00000525774 ERCC6L2Q5T890 1561 aa41.37■■■■■ 4.21
LRRC8D-205ENST00000525774 RUSC2Q8N2Y8 1516 aa41.34■■■■■ 4.21
LRRC8D-205ENST00000525774 CARMIL1Q5VZK9 1371 aa41.33■■■■■ 4.21
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms