RNA–Protein interactions for RNA: ENST00000466353.1

PLXNB1-209, Transcript of plexin B1, humanhuman

TSL 3

Gene PLXNB1, Length 626 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNB1-209ENST00000466353 NISCHQ9Y2I1 1504 aa46.03■■■■■ 4.96
PLXNB1-209ENST00000466353 CCDC180Q9P1Z9 1646 aa40.97■■■■■ 4.15
PLXNB1-209ENST00000466353 ABCC9O60706 1549 aa40.62■■■■■ 4.09
PLXNB1-209ENST00000466353 RB1CC1Q8TDY2 1594 aa38.8■■■■□ 3.8
PLXNB1-209ENST00000466353 DCAF8L2P0C7V8 631 aa38.76■■■■□ 3.8
PLXNB1-209ENST00000466353 NACADO15069 1562 aa38.67■■■■□ 3.78
PLXNB1-209ENST00000466353 MYO15BQ96JP2 1530 aa38.28■■■■□ 3.72
PLXNB1-209ENST00000466353 ZCCHC6Q5VYS8 1495 aaKnown RBP38.23■■■■□ 3.71
PLXNB1-209ENST00000466353 DCAF1Q9Y4B6 1507 aa38■■■■□ 3.67
PLXNB1-209ENST00000466353 PABPN1Q86U42 306 aaKnown RBP eCLIP37.98■■■■□ 3.67
PLXNB1-209ENST00000466353 UNC13AQ9UPW8 1703 aa37.9■■■■□ 3.66
PLXNB1-209ENST00000466353 DNAJC5BQ9UF47 199 aa37.76■■■■□ 3.64
PLXNB1-209ENST00000466353 BICRAQ9NZM4 1560 aa37.71■■■■□ 3.63
PLXNB1-209ENST00000466353 SCRIBQ14160 1630 aa37.45■■■■□ 3.59
PLXNB1-209ENST00000466353 SHROOM4Q9ULL8 1493 aa37.13■■■■□ 3.54
PLXNB1-209ENST00000466353 EIF4G1Q04637 1599 aaKnown RBP36.71■■■■□ 3.47
PLXNB1-209ENST00000466353 CC2D2AQ9P2K1 1620 aa36.67■■■■□ 3.46
PLXNB1-209ENST00000466353 CECR2Q9BXF3 1484 aa36.51■■■■□ 3.44
PLXNB1-209ENST00000466353 SMARCA4P51532 1647 aa35.76■■■■□ 3.32
PLXNB1-209ENST00000466353 NCAPD3P42695 1498 aa35.75■■■■□ 3.31
PLXNB1-209ENST00000466353 ATAD2BQ9ULI0 1458 aa35.72■■■■□ 3.31
PLXNB1-209ENST00000466353 BAZ1AQ9NRL2 1556 aaPredicted RBP35.66■■■■□ 3.3
PLXNB1-209ENST00000466353 SMARCA2P51531 1590 aa35.58■■■■□ 3.29
PLXNB1-209ENST00000466353 MROH2BQ7Z745 1585 aa35.51■■■■□ 3.27
PLXNB1-209ENST00000466353 HMGXB3Q12766 1538 aa35.46■■■■□ 3.27
PLXNB1-209ENST00000466353 PEG3Q9GZU2 1588 aa35.39■■■■□ 3.26
PLXNB1-209ENST00000466353 BAZ1BQ9UIG0 1483 aaKnown RBP35.36■■■■□ 3.25
PLXNB1-209ENST00000466353 WIZO95785 1651 aa35.08■■■■□ 3.21
PLXNB1-209ENST00000466353 NESP48681 1621 aa35.06■■■■□ 3.2
PLXNB1-209ENST00000466353 ERCC6Q03468 1493 aa34.98■■■■□ 3.19
PLXNB1-209ENST00000466353 RSF1Q96T23 1441 aaPredicted RBP34.98■■■■□ 3.19
PLXNB1-209ENST00000466353 LAMC3Q9Y6N6 1575 aa34.8■■■■□ 3.16
PLXNB1-209ENST00000466353 CUX2O14529 1486 aa34.71■■■■□ 3.15
PLXNB1-209ENST00000466353 CADPSQ9ULU8 1353 aa34.71■■■■□ 3.15
PLXNB1-209ENST00000466353 TOP2AP11388 1531 aaKnown RBP34.64■■■■□ 3.14
PLXNB1-209ENST00000466353 PDS5BQ9NTI5 1447 aa34.62■■■■□ 3.13
PLXNB1-209ENST00000466353 KIF21AQ7Z4S6 1674 aa34.53■■■■□ 3.12
PLXNB1-209ENST00000466353 THOC2Q8NI27 1593 aaKnown RBP34.5■■■■□ 3.11
PLXNB1-209ENST00000466353 CFTRP13569 1480 aa34.39■■■■□ 3.1
PLXNB1-209ENST00000466353 CCDC88BA6NC98 1476 aa34.32■■■■□ 3.08
PLXNB1-209ENST00000466353 FANCD2Q9BXW9 1451 aa34.28■■■■□ 3.08
PLXNB1-209ENST00000466353 MRC2Q9UBG0 1479 aa34.28■■■■□ 3.08
PLXNB1-209ENST00000466353 CEP164Q9UPV0 1460 aa34.24■■■■□ 3.07
PLXNB1-209ENST00000466353 DNAJC5Q9H3Z4 198 aa34.23■■■■□ 3.07
PLXNB1-209ENST00000466353 WDR62O43379 1518 aa34.16■■■■□ 3.06
PLXNB1-209ENST00000466353 URB2Q14146 1524 aaKnown RBP33.99■■■■□ 3.03
PLXNB1-209ENST00000466353 PRDM2Q13029 1718 aa33.95■■■■□ 3.03
PLXNB1-209ENST00000466353 SUPT5HO00267 1087 aaKnown RBP33.88■■■■□ 3.01
PLXNB1-209ENST00000466353 TOPBP1Q92547 1522 aa33.69■■■□□ 2.98
PLXNB1-209ENST00000466353 ABCC8Q09428 1581 aa33.61■■■□□ 2.97
PLXNB1-209ENST00000466353 DNMBPQ6XZF7 1577 aa33.57■■■□□ 2.96
PLXNB1-209ENST00000466353 IFT140Q96RY7 1462 aa33.55■■■□□ 2.96
PLXNB1-209ENST00000466353 ZNF608Q9ULD9 1512 aaPredicted RBP33.5■■■□□ 2.95
PLXNB1-209ENST00000466353 POLA1P09884 1462 aaPredicted RBP33.38■■■□□ 2.93
PLXNB1-209ENST00000466353 TARBP1Q13395 1621 aaKnown RBP33.33■■■□□ 2.93
PLXNB1-209ENST00000466353 OSCARQ8IYS5 282 aa33.32■■■□□ 2.92
PLXNB1-209ENST00000466353 CUX1P39880 1505 aa33.31■■■□□ 2.92
PLXNB1-209ENST00000466353 RAD54L2Q9Y4B4 1467 aa33.31■■■□□ 2.92
PLXNB1-209ENST00000466353 AQRO60306 1485 aaKnown RBP eCLIP33.28■■■□□ 2.924e-7■■■■■ 31.4
PLXNB1-209ENST00000466353 SOGA1O94964 1423 aa33.28■■■□□ 2.92
PLXNB1-209ENST00000466353 EIF4G3O43432 1585 aaKnown RBP33.26■■■□□ 2.91
PLXNB1-209ENST00000466353 FGD5Q6ZNL6 1462 aa33.25■■■□□ 2.91
PLXNB1-209ENST00000466353 TDRD9Q8NDG6 1382 aaKnown RBP33.17■■■□□ 2.9
PLXNB1-209ENST00000466353 FBLN2P98095 1184 aa32.98■■■□□ 2.87
PLXNB1-209ENST00000466353 TRIM41Q8WV44 630 aa32.96■■■□□ 2.87
PLXNB1-209ENST00000466353 WRNQ14191 1432 aaPredicted RBP eCLIP32.95■■■□□ 2.87
PLXNB1-209ENST00000466353 WDR97A6NE52 1622 aa32.95■■■□□ 2.86
PLXNB1-209ENST00000466353 SNAPC4Q5SXM2 1469 aa32.91■■■□□ 2.86
PLXNB1-209ENST00000466353 CHD1O14646 1710 aa32.9■■■□□ 2.86
PLXNB1-209ENST00000466353 SYNJ1O43426 1573 aa32.88■■■□□ 2.85
PLXNB1-209ENST00000466353 ABCA10Q8WWZ4 1543 aa32.88■■■□□ 2.85
PLXNB1-209ENST00000466353 GRIN2BQ13224 1484 aa32.88■■■□□ 2.85
PLXNB1-209ENST00000466353 TOP2BQ02880 1626 aa32.88■■■□□ 2.85
PLXNB1-209ENST00000466353 BIVM-ERCC5R4GMW8 1640 aa32.85■■■□□ 2.85
PLXNB1-209ENST00000466353 GAPVD1Q14C86 1478 aa32.85■■■□□ 2.85
PLXNB1-209ENST00000466353 CHMP7Q8WUX9 453 aaPredicted RBP32.8■■■□□ 2.84
PLXNB1-209ENST00000466353 MAGI1Q96QZ7 1491 aaPredicted RBP32.8■■■□□ 2.84
PLXNB1-209ENST00000466353 ABCA5Q8WWZ7 1642 aa32.76■■■□□ 2.83
PLXNB1-209ENST00000466353 RIMBP3CA6NJZ7 1639 aa32.75■■■□□ 2.83
PLXNB1-209ENST00000466353 RIMBP3BA6NNM3 1639 aa32.75■■■□□ 2.83
PLXNB1-209ENST00000466353 RIMBP3Q9UFD9 1639 aa32.75■■■□□ 2.83
PLXNB1-209ENST00000466353 PBRM1Q86U86 1689 aa32.72■■■□□ 2.83
PLXNB1-209ENST00000466353 ARHGEF11O15085 1522 aa32.72■■■□□ 2.83
PLXNB1-209ENST00000466353 SYNJ2O15056 1496 aa32.7■■■□□ 2.83
PLXNB1-209ENST00000466353 CLASP1Q7Z460 1538 aa32.57■■■□□ 2.8
PLXNB1-209ENST00000466353 CYB5RLQ6IPT4 315 aa32.54■■■□□ 2.8
PLXNB1-209ENST00000466353 ADAMTS12P58397 1594 aa32.47■■■□□ 2.79
PLXNB1-209ENST00000466353 GRIN2AQ12879 1464 aa32.46■■■□□ 2.79
PLXNB1-209ENST00000466353 ERICH3Q5RHP9 1530 aa32.46■■■□□ 2.79
PLXNB1-209ENST00000466353 ARAP1Q96P48 1450 aa32.45■■■□□ 2.79
PLXNB1-209ENST00000466353 FHAD1B1AJZ9 1412 aa32.44■■■□□ 2.78
PLXNB1-209ENST00000466353 NUP160Q12769 1436 aa32.34■■■□□ 2.77
PLXNB1-209ENST00000466353 CEP170Q5SW79 1584 aa32.32■■■□□ 2.77
PLXNB1-209ENST00000466353 KIF27Q86VH2 1401 aa32.27■■■□□ 2.76
PLXNB1-209ENST00000466353 IGF1RP08069 1367 aa32.27■■■□□ 2.76
PLXNB1-209ENST00000466353 ERCC6L2Q5T890 1561 aa32.17■■■□□ 2.74
PLXNB1-209ENST00000466353 SHROOM2Q13796 1616 aa32.1■■■□□ 2.73
PLXNB1-209ENST00000466353 JPH4Q96JJ6 628 aa32.09■■■□□ 2.73
PLXNB1-209ENST00000466353 CARMIL1Q5VZK9 1371 aa32.05■■■□□ 2.72
PLXNB1-209ENST00000466353 CUL7Q14999 1698 aa32.05■■■□□ 2.72
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms