RNA–Protein interactions for RNA: ENST00000497330.5

NUP35-210, Transcript of nucleoporin 35, humanhuman

TSL 5

Gene NUP35, Length 544 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-210ENST00000497330 AEBP2Q6ZN18 517 aaPredicted RBP14.88□□□□□ -0.03
NUP35-210ENST00000497330 CHIC1Q5VXU3 224 aa14.7□□□□□ -0.06
NUP35-210ENST00000497330 NISCHQ9Y2I1 1504 aa13.11□□□□□ -0.31
NUP35-210ENST00000497330 PHF23Q9BUL5 403 aaPredicted RBP13.01□□□□□ -0.33
NUP35-210ENST00000497330 SENP3Q9H4L4 574 aaPredicted RBP12.61□□□□□ -0.39
NUP35-210ENST00000497330 PLPPR3Q6T4P5 718 aa12.03□□□□□ -0.48
NUP35-210ENST00000497330 ABCC9O60706 1549 aa11.84□□□□□ -0.51
NUP35-210ENST00000497330 CCDC180Q9P1Z9 1646 aa11.79□□□□□ -0.52
NUP35-210ENST00000497330 FOXD1Q16676 465 aa11.77□□□□□ -0.53
NUP35-210ENST00000497330 ADRA2BP18089 450 aa11.47□□□□□ -0.57
NUP35-210ENST00000497330 PPP6R1Q9UPN7 881 aa11.43□□□□□ -0.58
NUP35-210ENST00000497330 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
NUP35-210ENST00000497330 DNAJC5BQ9UF47 199 aa11.17□□□□□ -0.62
NUP35-210ENST00000497330 NACADO15069 1562 aa11.16□□□□□ -0.62
NUP35-210ENST00000497330 PIAS4Q8N2W9 510 aaPredicted RBP11.06□□□□□ -0.64
NUP35-210ENST00000497330 DCAF8L2P0C7V8 631 aa11.04□□□□□ -0.64
NUP35-210ENST00000497330 MYO15BQ96JP2 1530 aa11.01□□□□□ -0.65
NUP35-210ENST00000497330 MSH5O43196 834 aa11.01□□□□□ -0.65
NUP35-210ENST00000497330 PABPN1Q86U42 306 aaKnown RBP eCLIP11.01□□□□□ -0.65
NUP35-210ENST00000497330 UNC13AQ9UPW8 1703 aa11.01□□□□□ -0.65
NUP35-210ENST00000497330 BICRAQ9NZM4 1560 aa10.94□□□□□ -0.66
NUP35-210ENST00000497330 ZCCHC6Q5VYS8 1495 aaKnown RBP10.87□□□□□ -0.67
NUP35-210ENST00000497330 DCAF1Q9Y4B6 1507 aa10.84□□□□□ -0.67
NUP35-210ENST00000497330 POTEDQ86YR6 584 aa10.81□□□□□ -0.68
NUP35-210ENST00000497330 SHROOM4Q9ULL8 1493 aa10.8□□□□□ -0.68
NUP35-210ENST00000497330 KCNA4P22459 653 aa10.77□□□□□ -0.69
NUP35-210ENST00000497330 SCRIBQ14160 1630 aa10.73□□□□□ -0.69
NUP35-210ENST00000497330 CC2D2AQ9P2K1 1620 aa10.7□□□□□ -0.7
NUP35-210ENST00000497330 PPP4R3CPQ6ZMV5 832 aa10.7□□□□□ -0.7
NUP35-210ENST00000497330 CECR2Q9BXF3 1484 aa10.68□□□□□ -0.7
NUP35-210ENST00000497330 EIF4G1Q04637 1599 aaKnown RBP10.68□□□□□ -0.7
NUP35-210ENST00000497330 NCBP3Q53F19 620 aaKnown RBP10.43□□□□□ -0.74
NUP35-210ENST00000497330 EHMT2Q96KQ7 1210 aa10.37□□□□□ -0.75
NUP35-210ENST00000497330 SCAF1Q9H7N4 1312 aaKnown RBP10.36□□□□□ -0.75
NUP35-210ENST00000497330 MAPK8IP2Q13387 824 aaPredicted RBP10.35□□□□□ -0.75
NUP35-210ENST00000497330 NPM3O75607 178 aaKnown RBP10.32□□□□□ -0.76
NUP35-210ENST00000497330 NCAPD3P42695 1498 aa10.31□□□□□ -0.76
NUP35-210ENST00000497330 DNAJC5Q9H3Z4 198 aa10.3□□□□□ -0.76
NUP35-210ENST00000497330 CNKSR2Q8WXI2 1034 aa10.28□□□□□ -0.76
NUP35-210ENST00000497330 SLC4A1APQ9BWU0 796 aaKnown RBP10.28□□□□□ -0.76
NUP35-210ENST00000497330 ATAD2BQ9ULI0 1458 aa10.27□□□□□ -0.77
NUP35-210ENST00000497330 CUX2O14529 1486 aa10.24□□□□□ -0.77
NUP35-210ENST00000497330 SMARCA4P51532 1647 aa10.24□□□□□ -0.77
NUP35-210ENST00000497330 HMGXB3Q12766 1538 aa10.23□□□□□ -0.77
NUP35-210ENST00000497330 SMARCA2P51531 1590 aa10.23□□□□□ -0.77
NUP35-210ENST00000497330 ERCC6Q03468 1493 aa10.23□□□□□ -0.77
NUP35-210ENST00000497330 BAZ1AQ9NRL2 1556 aaPredicted RBP10.18□□□□□ -0.78
NUP35-210ENST00000497330 NESP48681 1621 aa10.16□□□□□ -0.78
NUP35-210ENST00000497330 PEG3Q9GZU2 1588 aa10.16□□□□□ -0.78
NUP35-210ENST00000497330 BAZ1BQ9UIG0 1483 aaKnown RBP10.16□□□□□ -0.78
NUP35-210ENST00000497330 MROH2BQ7Z745 1585 aa10.1□□□□□ -0.79
NUP35-210ENST00000497330 LAMC3Q9Y6N6 1575 aa10.09□□□□□ -0.79
NUP35-210ENST00000497330 THOC2Q8NI27 1593 aaKnown RBP10.08□□□□□ -0.8
NUP35-210ENST00000497330 CSRNP3Q8WYN3 585 aa10.03□□□□□ -0.8
NUP35-210ENST00000497330 KIF21AQ7Z4S6 1674 aa10.02□□□□□ -0.8
NUP35-210ENST00000497330 PDS5BQ9NTI5 1447 aa10.02□□□□□ -0.81
NUP35-210ENST00000497330 DMRT2Q9Y5R5 561 aa10.01□□□□□ -0.81
NUP35-210ENST00000497330 RNF216Q9NWF9 866 aaPredicted RBP10□□□□□ -0.81
NUP35-210ENST00000497330 CADPSQ9ULU8 1353 aa9.99□□□□□ -0.81
NUP35-210ENST00000497330 WIZO95785 1651 aa9.97□□□□□ -0.81
NUP35-210ENST00000497330 MRC2Q9UBG0 1479 aa9.94□□□□□ -0.82
NUP35-210ENST00000497330 WDR62O43379 1518 aa9.93□□□□□ -0.82
NUP35-210ENST00000497330 ZBTB22O15209 634 aa9.91□□□□□ -0.82
NUP35-210ENST00000497330 CEP164Q9UPV0 1460 aa9.89□□□□□ -0.83
NUP35-210ENST00000497330 HOXD11P31277 338 aaPredicted RBP9.88□□□□□ -0.83
NUP35-210ENST00000497330 CFTRP13569 1480 aa9.87□□□□□ -0.83
NUP35-210ENST00000497330 FANCD2Q9BXW9 1451 aa9.87□□□□□ -0.83
NUP35-210ENST00000497330 RSF1Q96T23 1441 aaPredicted RBP9.87□□□□□ -0.83
NUP35-210ENST00000497330 TOP2AP11388 1531 aaKnown RBP9.85□□□□□ -0.83
NUP35-210ENST00000497330 TRIM41Q8WV44 630 aa9.8□□□□□ -0.84
NUP35-210ENST00000497330 URB2Q14146 1524 aaKnown RBP9.8□□□□□ -0.84
NUP35-210ENST00000497330 FOXD4L1Q9NU39 408 aa9.77□□□□□ -0.85
NUP35-210ENST00000497330 PRDM2Q13029 1718 aa9.76□□□□□ -0.85
NUP35-210ENST00000497330 DCAF8L1A6NGE4 600 aa9.75□□□□□ -0.85
NUP35-210ENST00000497330 OSCARQ8IYS5 282 aa9.75□□□□□ -0.85
NUP35-210ENST00000497330 CCDC88BA6NC98 1476 aa9.73□□□□□ -0.85
NUP35-210ENST00000497330 IFT140Q96RY7 1462 aa9.7□□□□□ -0.86
NUP35-210ENST00000497330 SLC4A2P04920 1241 aa9.69□□□□□ -0.86
NUP35-210ENST00000497330 ZNF608Q9ULD9 1512 aaPredicted RBP9.69□□□□□ -0.86
NUP35-210ENST00000497330 TOPBP1Q92547 1522 aa9.68□□□□□ -0.86
NUP35-210ENST00000497330 ABCC8Q09428 1581 aa9.65□□□□□ -0.86
NUP35-210ENST00000497330 RIMBP3CA6NJZ7 1639 aa9.64□□□□□ -0.87
NUP35-210ENST00000497330 RIMBP3BA6NNM3 1639 aa9.64□□□□□ -0.87
NUP35-210ENST00000497330 RIMBP3Q9UFD9 1639 aa9.64□□□□□ -0.87
NUP35-210ENST00000497330 DNMBPQ6XZF7 1577 aa9.64□□□□□ -0.87
NUP35-210ENST00000497330 EIF4G3O43432 1585 aaKnown RBP9.63□□□□□ -0.87
NUP35-210ENST00000497330 TARBP1Q13395 1621 aaKnown RBP9.61□□□□□ -0.87
NUP35-210ENST00000497330 ARHGEF11O15085 1522 aa9.61□□□□□ -0.87
NUP35-210ENST00000497330 AQRO60306 1485 aaKnown RBP eCLIP9.59□□□□□ -0.874e-6■■■□□ 15.5
NUP35-210ENST00000497330 POLA1P09884 1462 aaPredicted RBP9.59□□□□□ -0.87
NUP35-210ENST00000497330 CHD1O14646 1710 aa9.56□□□□□ -0.88
NUP35-210ENST00000497330 RAD54L2Q9Y4B4 1467 aa9.53□□□□□ -0.88
NUP35-210ENST00000497330 CACNB1Q02641 598 aaPredicted RBP9.53□□□□□ -0.88
NUP35-210ENST00000497330 GRWD1Q9BQ67 446 aaKnown RBP eCLIP9.53□□□□□ -0.88
NUP35-210ENST00000497330 SOGA1O94964 1423 aa9.52□□□□□ -0.89
NUP35-210ENST00000497330 CYB5RLQ6IPT4 315 aa9.52□□□□□ -0.89
NUP35-210ENST00000497330 TDRD9Q8NDG6 1382 aaKnown RBP9.51□□□□□ -0.89
NUP35-210ENST00000497330 FBLN2P98095 1184 aa9.51□□□□□ -0.89
NUP35-210ENST00000497330 WDR97A6NE52 1622 aa9.51□□□□□ -0.89
NUP35-210ENST00000497330 FGD5Q6ZNL6 1462 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms