RNA–Protein interactions for RNA: ENST00000456380.5

TRA2B-206, Transcript of transformer 2 beta homolog, humanhuman

TSL 5

Gene TRA2B, Length 1,697 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-206ENST00000456380 NISCHQ9Y2I1 1504 aa31.28■■■□□ 2.6
TRA2B-206ENST00000456380 ABCC9O60706 1549 aa28.26■■■□□ 2.11
TRA2B-206ENST00000456380 CCDC180Q9P1Z9 1646 aa28.04■■■□□ 2.08
TRA2B-206ENST00000456380 RB1CC1Q8TDY2 1594 aa26.79■■□□□ 1.88
TRA2B-206ENST00000456380 DNAJC5BQ9UF47 199 aa26.72■■□□□ 1.87
TRA2B-206ENST00000456380 NACADO15069 1562 aa26.59■■□□□ 1.85
TRA2B-206ENST00000456380 DCAF8L2P0C7V8 631 aa26.51■■□□□ 1.83
TRA2B-206ENST00000456380 PABPN1Q86U42 306 aaKnown RBP eCLIP26.35■■□□□ 1.81
TRA2B-206ENST00000456380 MYO15BQ96JP2 1530 aa26.19■■□□□ 1.78
TRA2B-206ENST00000456380 UNC13AQ9UPW8 1703 aa26.16■■□□□ 1.78
TRA2B-206ENST00000456380 BICRAQ9NZM4 1560 aa26.06■■□□□ 1.76
TRA2B-206ENST00000456380 ZCCHC6Q5VYS8 1495 aaKnown RBP25.89■■□□□ 1.73
TRA2B-206ENST00000456380 DCAF1Q9Y4B6 1507 aa25.81■■□□□ 1.72
TRA2B-206ENST00000456380 SHROOM4Q9ULL8 1493 aa25.65■■□□□ 1.7
TRA2B-206ENST00000456380 SCRIBQ14160 1630 aa25.59■■□□□ 1.69
TRA2B-206ENST00000456380 CC2D2AQ9P2K1 1620 aa25.5■■□□□ 1.67
TRA2B-206ENST00000456380 CECR2Q9BXF3 1484 aa25.47■■□□□ 1.67
TRA2B-206ENST00000456380 EIF4G1Q04637 1599 aaKnown RBP25.41■■□□□ 1.66
TRA2B-206ENST00000456380 NCAPD3P42695 1498 aa24.6■■□□□ 1.53
TRA2B-206ENST00000456380 DNAJC5Q9H3Z4 198 aa24.59■■□□□ 1.53
TRA2B-206ENST00000456380 ATAD2BQ9ULI0 1458 aa24.5■■□□□ 1.51
TRA2B-206ENST00000456380 SMARCA4P51532 1647 aa24.4■■□□□ 1.5
TRA2B-206ENST00000456380 ERCC6Q03468 1493 aa24.39■■□□□ 1.5
TRA2B-206ENST00000456380 CUX2O14529 1486 aa24.38■■□□□ 1.49
TRA2B-206ENST00000456380 SMARCA2P51531 1590 aa24.38■■□□□ 1.49
TRA2B-206ENST00000456380 HMGXB3Q12766 1538 aa24.35■■□□□ 1.49
TRA2B-206ENST00000456380 BAZ1AQ9NRL2 1556 aaPredicted RBP24.26■■□□□ 1.47
TRA2B-206ENST00000456380 NESP48681 1621 aa24.25■■□□□ 1.47
TRA2B-206ENST00000456380 BAZ1BQ9UIG0 1483 aaKnown RBP24.23■■□□□ 1.47
TRA2B-206ENST00000456380 PEG3Q9GZU2 1588 aa24.17■■□□□ 1.46
TRA2B-206ENST00000456380 MROH2BQ7Z745 1585 aa24.11■■□□□ 1.45
TRA2B-206ENST00000456380 LAMC3Q9Y6N6 1575 aa24.01■■□□□ 1.43
TRA2B-206ENST00000456380 THOC2Q8NI27 1593 aaKnown RBP23.98■■□□□ 1.43
TRA2B-206ENST00000456380 PDS5BQ9NTI5 1447 aa23.91■■□□□ 1.42
TRA2B-206ENST00000456380 KIF21AQ7Z4S6 1674 aa23.87■■□□□ 1.41
TRA2B-206ENST00000456380 CADPSQ9ULU8 1353 aa23.85■■□□□ 1.41
TRA2B-206ENST00000456380 WIZO95785 1651 aa23.79■■□□□ 1.4
TRA2B-206ENST00000456380 MRC2Q9UBG0 1479 aa23.7■■□□□ 1.38
TRA2B-206ENST00000456380 WDR62O43379 1518 aa23.64■■□□□ 1.37
TRA2B-206ENST00000456380 RSF1Q96T23 1441 aaPredicted RBP23.59■■□□□ 1.37
TRA2B-206ENST00000456380 CEP164Q9UPV0 1460 aa23.58■■□□□ 1.36
TRA2B-206ENST00000456380 FANCD2Q9BXW9 1451 aa23.56■■□□□ 1.36
TRA2B-206ENST00000456380 CFTRP13569 1480 aa23.54■■□□□ 1.36
TRA2B-206ENST00000456380 TOP2AP11388 1531 aaKnown RBP23.47■■□□□ 1.35
TRA2B-206ENST00000456380 TRIM41Q8WV44 630 aa23.44■■□□□ 1.34
TRA2B-206ENST00000456380 URB2Q14146 1524 aaKnown RBP23.38■■□□□ 1.33
TRA2B-206ENST00000456380 OSCARQ8IYS5 282 aa23.31■■□□□ 1.32
TRA2B-206ENST00000456380 CCDC88BA6NC98 1476 aa23.25■■□□□ 1.31
TRA2B-206ENST00000456380 PRDM2Q13029 1718 aa23.16■■□□□ 1.3
TRA2B-206ENST00000456380 ZNF608Q9ULD9 1512 aaPredicted RBP23.13■■□□□ 1.29
TRA2B-206ENST00000456380 IFT140Q96RY7 1462 aa23.12■■□□□ 1.29
TRA2B-206ENST00000456380 TOPBP1Q92547 1522 aa23.1■■□□□ 1.29
TRA2B-206ENST00000456380 ABCC8Q09428 1581 aa23.02■■□□□ 1.27
TRA2B-206ENST00000456380 DNMBPQ6XZF7 1577 aa22.97■■□□□ 1.27
TRA2B-206ENST00000456380 RIMBP3CA6NJZ7 1639 aa22.96■■□□□ 1.27
TRA2B-206ENST00000456380 RIMBP3BA6NNM3 1639 aa22.96■■□□□ 1.27
TRA2B-206ENST00000456380 RIMBP3Q9UFD9 1639 aa22.96■■□□□ 1.27
TRA2B-206ENST00000456380 EIF4G3O43432 1585 aaKnown RBP22.93■■□□□ 1.26
TRA2B-206ENST00000456380 AQRO60306 1485 aaKnown RBP eCLIP22.91■■□□□ 1.262e-7■■■■□ 20.5
TRA2B-206ENST00000456380 ARHGEF11O15085 1522 aa22.89■■□□□ 1.26
TRA2B-206ENST00000456380 TARBP1Q13395 1621 aaKnown RBP22.89■■□□□ 1.25
TRA2B-206ENST00000456380 POLA1P09884 1462 aaPredicted RBP22.86■■□□□ 1.25
TRA2B-206ENST00000456380 RAD54L2Q9Y4B4 1467 aa22.8■■□□□ 1.24
TRA2B-206ENST00000456380 FBLN2P98095 1184 aa22.79■■□□□ 1.24
TRA2B-206ENST00000456380 CYB5RLQ6IPT4 315 aa22.79■■□□□ 1.24
TRA2B-206ENST00000456380 SOGA1O94964 1423 aa22.77■■□□□ 1.24
TRA2B-206ENST00000456380 CHD1O14646 1710 aa22.76■■□□□ 1.23
TRA2B-206ENST00000456380 TDRD9Q8NDG6 1382 aaKnown RBP22.76■■□□□ 1.23
TRA2B-206ENST00000456380 FGD5Q6ZNL6 1462 aa22.69■■□□□ 1.22
TRA2B-206ENST00000456380 ARAP1Q96P48 1450 aa22.67■■□□□ 1.22
TRA2B-206ENST00000456380 CUX1P39880 1505 aa22.66■■□□□ 1.22
TRA2B-206ENST00000456380 SNAPC4Q5SXM2 1469 aa22.64■■□□□ 1.22
TRA2B-206ENST00000456380 CHMP7Q8WUX9 453 aaPredicted RBP22.6■■□□□ 1.21
TRA2B-206ENST00000456380 WDR97A6NE52 1622 aa22.6■■□□□ 1.21
TRA2B-206ENST00000456380 GRIN2BQ13224 1484 aa22.56■■□□□ 1.2
TRA2B-206ENST00000456380 MAGI1Q96QZ7 1491 aaPredicted RBP22.56■■□□□ 1.2
TRA2B-206ENST00000456380 TRHP20396 242 aaPredicted RBP22.56■■□□□ 1.2
TRA2B-206ENST00000456380 CLASP1Q7Z460 1538 aa22.54■■□□□ 1.2
TRA2B-206ENST00000456380 SYNJ1O43426 1573 aa22.5■■□□□ 1.19
TRA2B-206ENST00000456380 SYNJ2O15056 1496 aa22.5■■□□□ 1.19
TRA2B-206ENST00000456380 SUPT5HO00267 1087 aaKnown RBP22.47■■□□□ 1.19
TRA2B-206ENST00000456380 GAPVD1Q14C86 1478 aa22.47■■□□□ 1.19
TRA2B-206ENST00000456380 ABCA10Q8WWZ4 1543 aa22.43■■□□□ 1.18
TRA2B-206ENST00000456380 PBRM1Q86U86 1689 aa22.39■■□□□ 1.18
TRA2B-206ENST00000456380 ABCA5Q8WWZ7 1642 aa22.37■■□□□ 1.17
TRA2B-206ENST00000456380 WRNQ14191 1432 aaPredicted RBP eCLIP22.32■■□□□ 1.16
TRA2B-206ENST00000456380 GRIN2AQ12879 1464 aa22.27■■□□□ 1.15
TRA2B-206ENST00000456380 TOP2BQ02880 1626 aa22.23■■□□□ 1.15
TRA2B-206ENST00000456380 ERCC6L2Q5T890 1561 aa22.21■■□□□ 1.15
TRA2B-206ENST00000456380 NUP160Q12769 1436 aa22.21■■□□□ 1.15
TRA2B-206ENST00000456380 ADAMTS12P58397 1594 aa22.21■■□□□ 1.15
TRA2B-206ENST00000456380 BIVM-ERCC5R4GMW8 1640 aa22.21■■□□□ 1.15
TRA2B-206ENST00000456380 CEP170Q5SW79 1584 aa22.19■■□□□ 1.14
TRA2B-206ENST00000456380 FHAD1B1AJZ9 1412 aa22.18■■□□□ 1.14
TRA2B-206ENST00000456380 ERICH3Q5RHP9 1530 aa22.12■■□□□ 1.13
TRA2B-206ENST00000456380 SHROOM2Q13796 1616 aa22.09■■□□□ 1.13
TRA2B-206ENST00000456380 JPH4Q96JJ6 628 aa22.02■■□□□ 1.12
TRA2B-206ENST00000456380 PRG4Q92954 1404 aaPredicted RBP22.02■■□□□ 1.12
TRA2B-206ENST00000456380 AEBP2Q6ZN18 517 aaPredicted RBP21.98■■□□□ 1.11
TRA2B-206ENST00000456380 RUSC2Q8N2Y8 1516 aa21.9■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms