RNA–Protein interactions for RNA: ENST00000298316.6

ARF6-201, Transcript of ADP ribosylation factor 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARF6, Length 3,865 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARF6-201ENST00000298316 NISCHQ9Y2I1 1504 aa30.39■■■□□ 2.45
ARF6-201ENST00000298316 DCAF8L2P0C7V8 631 aa28.67■■■□□ 2.18
ARF6-201ENST00000298316 SHROOM4Q9ULL8 1493 aa27.84■■■□□ 2.05
ARF6-201ENST00000298316 SUPT5HO00267 1087 aaKnown RBP27.53■■■□□ 2
ARF6-201ENST00000298316 EHMT2Q96KQ7 1210 aa26.24■■□□□ 1.79
ARF6-201ENST00000298316 FAM9AQ8IZU1 332 aaPredicted RBP25.81■■□□□ 1.72
ARF6-201ENST00000298316 ABCC9O60706 1549 aa25.7■■□□□ 1.71
ARF6-201ENST00000298316 CHIC1Q5VXU3 224 aa25.33■■□□□ 1.65
ARF6-201ENST00000298316 TRIM41Q8WV44 630 aa25.33■■□□□ 1.65
ARF6-201ENST00000298316 ZCCHC6Q5VYS8 1495 aaKnown RBP25.32■■□□□ 1.64
ARF6-201ENST00000298316 PCGF6Q9BYE7 350 aa25.22■■□□□ 1.63
ARF6-201ENST00000298316 LOC105371045A0A1W2PR82 267 aa25.2■■□□□ 1.62
ARF6-201ENST00000298316 PABPN1Q86U42 306 aaKnown RBP eCLIP25.19■■□□□ 1.62
ARF6-201ENST00000298316 TTBK1Q5TCY1 1321 aaPredicted RBP25.18■■□□□ 1.62
ARF6-201ENST00000298316 CCDC180Q9P1Z9 1646 aa25.12■■□□□ 1.61
ARF6-201ENST00000298316 RANGAP1P46060 587 aaPredicted RBP25■■□□□ 1.59
ARF6-201ENST00000298316 PPARGC1BQ86YN6 1023 aaKnown RBP24.92■■□□□ 1.58
ARF6-201ENST00000298316 SCRIBQ14160 1630 aa24.86■■□□□ 1.57
ARF6-201ENST00000298316 UBTFP17480 764 aaKnown RBP24.65■■□□□ 1.54
ARF6-201ENST00000298316 APLP2Q06481 763 aa24.41■■□□□ 1.5
ARF6-201ENST00000298316 MYO15BQ96JP2 1530 aa24.25■■□□□ 1.47
ARF6-201ENST00000298316 RSF1Q96T23 1441 aaPredicted RBP24.24■■□□□ 1.47
ARF6-201ENST00000298316 ATP1B4Q9UN42 357 aaPredicted RBP24.22■■□□□ 1.47
ARF6-201ENST00000298316 TRIM26Q12899 539 aaPredicted RBP24.18■■□□□ 1.46
ARF6-201ENST00000298316 CECR2Q9BXF3 1484 aa24.16■■□□□ 1.46
ARF6-201ENST00000298316 CCER1Q8TC90 406 aaPredicted RBP24.11■■□□□ 1.45
ARF6-201ENST00000298316 HRCP23327 699 aa24.11■■□□□ 1.45
ARF6-201ENST00000298316 DCAF1Q9Y4B6 1507 aa24.11■■□□□ 1.45
ARF6-201ENST00000298316 NACADO15069 1562 aa24■■□□□ 1.43
ARF6-201ENST00000298316 RB1CC1Q8TDY2 1594 aa24■■□□□ 1.43
ARF6-201ENST00000298316 HNRNPUL2Q1KMD3 747 aaKnown RBP23.86■■□□□ 1.41
ARF6-201ENST00000298316 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP23.83■■□□□ 1.41
ARF6-201ENST00000298316 ITGAEP38570 1179 aa23.83■■□□□ 1.4
ARF6-201ENST00000298316 MROH2BQ7Z745 1585 aa23.79■■□□□ 1.4
ARF6-201ENST00000298316 CSRNP3Q8WYN3 585 aa23.76■■□□□ 1.39
ARF6-201ENST00000298316 PELP1Q8IZL8 1130 aaKnown RBP23.71■■□□□ 1.39
ARF6-201ENST00000298316 ZEB1P37275 1124 aaPredicted RBP23.66■■□□□ 1.38
ARF6-201ENST00000298316 P3H3Q8IVL6 736 aa23.53■■□□□ 1.36
ARF6-201ENST00000298316 BAZ1AQ9NRL2 1556 aaPredicted RBP23.5■■□□□ 1.35
ARF6-201ENST00000298316 WIZO95785 1651 aa23.5■■□□□ 1.35
ARF6-201ENST00000298316 BAZ1BQ9UIG0 1483 aaKnown RBP23.36■■□□□ 1.33
ARF6-201ENST00000298316 CCDC88BA6NC98 1476 aa23.35■■□□□ 1.33
ARF6-201ENST00000298316 ABCC8Q09428 1581 aa23.33■■□□□ 1.33
ARF6-201ENST00000298316 YTHDC1Q96MU7 727 aaKnown RBP23.31■■□□□ 1.32
ARF6-201ENST00000298316 ARID3CA6NKF2 412 aa23.3■■□□□ 1.32
ARF6-201ENST00000298316 SOGA1O94964 1423 aa23.28■■□□□ 1.32
ARF6-201ENST00000298316 WRNQ14191 1432 aaPredicted RBP eCLIP23.27■■□□□ 1.321e-8■■■■■ 36.1
ARF6-201ENST00000298316 FAM50AQ14320 339 aaKnown RBP23.24■■□□□ 1.31
ARF6-201ENST00000298316 FBLN2P98095 1184 aa23.22■■□□□ 1.31
ARF6-201ENST00000298316 CENPBP07199 599 aaPredicted RBP23.11■■□□□ 1.29
ARF6-201ENST00000298316 CEP162Q5TB80 1403 aa23.09■■□□□ 1.29
ARF6-201ENST00000298316 SMARCA4P51532 1647 aa23.05■■□□□ 1.28
ARF6-201ENST00000298316 CLIP1P30622 1438 aa23■■□□□ 1.27
ARF6-201ENST00000298316 TOP2AP11388 1531 aaKnown RBP23■■□□□ 1.27
ARF6-201ENST00000298316 RUSC2Q8N2Y8 1516 aa22.98■■□□□ 1.27
ARF6-201ENST00000298316 ATAD2BQ9ULI0 1458 aa22.97■■□□□ 1.27
ARF6-201ENST00000298316 NEUROD1Q13562 356 aa22.97■■□□□ 1.27
ARF6-201ENST00000298316 DIEXFQ68CQ4 756 aaKnown RBP22.94■■□□□ 1.26
ARF6-201ENST00000298316 GOLGA3Q08378 1498 aa22.9■■□□□ 1.26
ARF6-201ENST00000298316 MYT1Q01538 1121 aa22.87■■□□□ 1.25
ARF6-201ENST00000298316 TNIKQ9UKE5 1360 aa22.87■■□□□ 1.25
ARF6-201ENST00000298316 SCAF1Q9H7N4 1312 aaKnown RBP22.87■■□□□ 1.25
ARF6-201ENST00000298316 CNGB1Q14028 1251 aaPredicted RBP22.85■■□□□ 1.25
ARF6-201ENST00000298316 GTF3C3Q9Y5Q9 886 aa22.83■■□□□ 1.24
ARF6-201ENST00000298316 EEA1Q15075 1411 aa22.82■■□□□ 1.24
ARF6-201ENST00000298316 SMARCA2P51531 1590 aa22.8■■□□□ 1.24
ARF6-201ENST00000298316 TRIM52Q96A61 297 aa22.77■■□□□ 1.24
ARF6-201ENST00000298316 KIF27Q86VH2 1401 aa22.75■■□□□ 1.23
ARF6-201ENST00000298316 CEP164Q9UPV0 1460 aa22.74■■□□□ 1.23
ARF6-201ENST00000298316 POLR3GLQ9BT43 218 aa22.73■■□□□ 1.23
ARF6-201ENST00000298316 MYT1LQ9UL68 1186 aa22.71■■□□□ 1.23
ARF6-201ENST00000298316 CUX2O14529 1486 aa22.7■■□□□ 1.22
ARF6-201ENST00000298316 ZNF777Q9ULD5 760 aaPredicted RBP22.65■■□□□ 1.22
ARF6-201ENST00000298316 CHIC2Q9UKJ5 165 aa22.64■■□□□ 1.21
ARF6-201ENST00000298316 ZNF316A6NFI3 1004 aaPredicted RBP22.62■■□□□ 1.21
ARF6-201ENST00000298316 KANK4Q5T7N3 995 aaPredicted RBP22.61■■□□□ 1.21
ARF6-201ENST00000298316 BICRAQ9NZM4 1560 aa22.61■■□□□ 1.21
ARF6-201ENST00000298316 RAPGEF2Q9Y4G8 1499 aa22.59■■□□□ 1.21
ARF6-201ENST00000298316 TDRD9Q8NDG6 1382 aaKnown RBP22.58■■□□□ 1.2
ARF6-201ENST00000298316 CARMIL1Q5VZK9 1371 aa22.57■■□□□ 1.2
ARF6-201ENST00000298316 CADPSQ9ULU8 1353 aa22.56■■□□□ 1.2
ARF6-201ENST00000298316 DNAJC5BQ9UF47 199 aa22.54■■□□□ 1.2
ARF6-201ENST00000298316 ACIN1Q9UKV3 1341 aaKnown RBP22.54■■□□□ 1.2
ARF6-201ENST00000298316 CHMP7Q8WUX9 453 aaPredicted RBP22.52■■□□□ 1.2
ARF6-201ENST00000298316 ZNF326Q5BKZ1 582 aaKnown RBP22.5■■□□□ 1.19
ARF6-201ENST00000298316 EIF4G1Q04637 1599 aaKnown RBP22.5■■□□□ 1.19
ARF6-201ENST00000298316 HIRIP3Q9BW71 556 aaPredicted RBP22.46■■□□□ 1.19
ARF6-201ENST00000298316 MTUS2Q5JR59 1369 aa22.46■■□□□ 1.19
ARF6-201ENST00000298316 UNC13AQ9UPW8 1703 aa22.42■■□□□ 1.18
ARF6-201ENST00000298316 VPS8Q8N3P4 1428 aa22.4■■□□□ 1.18
ARF6-201ENST00000298316 RRP7BPQ9NSQ0 103 aa22.39■■□□□ 1.18
ARF6-201ENST00000298316 NCAPD3P42695 1498 aa22.38■■□□□ 1.17
ARF6-201ENST00000298316 SYNJ1O43426 1573 aa22.35■■□□□ 1.17
ARF6-201ENST00000298316 ERCC6Q03468 1493 aa22.3■■□□□ 1.16
ARF6-201ENST00000298316 FANCD2Q9BXW9 1451 aa22.3■■□□□ 1.16
ARF6-201ENST00000298316 NESP48681 1621 aa22.29■■□□□ 1.16
ARF6-201ENST00000298316 CDK11AQ9UQ88 783 aaPredicted RBP22.29■■□□□ 1.16
ARF6-201ENST00000298316 SIN3AQ96ST3 1273 aa22.28■■□□□ 1.16
ARF6-201ENST00000298316 RAD54L2Q9Y4B4 1467 aa22.28■■□□□ 1.16
ARF6-201ENST00000298316 MIER1Q8N108 512 aa22.25■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms