RNA–Protein interactions for RNA: ENST00000442895.6

NUP35-204, Transcript of nucleoporin 35, humanhuman

TSL 4

Gene NUP35, Length 616 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-204ENST00000442895 AEBP2Q6ZN18 517 aaPredicted RBP16.64■□□□□ 0.25
NUP35-204ENST00000442895 CHIC1Q5VXU3 224 aa15.67■□□□□ 0.1
NUP35-204ENST00000442895 SENP3Q9H4L4 574 aaPredicted RBP14.44□□□□□ -0.1
NUP35-204ENST00000442895 PHF23Q9BUL5 403 aaPredicted RBP14.11□□□□□ -0.15
NUP35-204ENST00000442895 POTEDQ86YR6 584 aa14.1□□□□□ -0.15
NUP35-204ENST00000442895 FOXD1Q16676 465 aa13.5□□□□□ -0.25
NUP35-204ENST00000442895 MSH5O43196 834 aa13.04□□□□□ -0.32
NUP35-204ENST00000442895 PIAS4Q8N2W9 510 aaPredicted RBP12.47□□□□□ -0.41
NUP35-204ENST00000442895 PPP6R1Q9UPN7 881 aa11.95□□□□□ -0.5
NUP35-204ENST00000442895 ADRA2BP18089 450 aa11.91□□□□□ -0.5
NUP35-204ENST00000442895 CACNB1Q02641 598 aaPredicted RBP11.74□□□□□ -0.53
NUP35-204ENST00000442895 PLPPR3Q6T4P5 718 aa11.69□□□□□ -0.54
NUP35-204ENST00000442895 DMRT2Q9Y5R5 561 aa11.28□□□□□ -0.6
NUP35-204ENST00000442895 MAPK8IP2Q13387 824 aaPredicted RBP11.18□□□□□ -0.62
NUP35-204ENST00000442895 SCAF1Q9H7N4 1312 aaKnown RBP11.01□□□□□ -0.65
NUP35-204ENST00000442895 DCAF8L1A6NGE4 600 aa11□□□□□ -0.65
NUP35-204ENST00000442895 RNF39Q9H2S5 420 aa10.98□□□□□ -0.65
NUP35-204ENST00000442895 POTEHQ6S545 545 aa10.92□□□□□ -0.66
NUP35-204ENST00000442895 C1QBPQ07021 282 aaKnown RBP10.83□□□□□ -0.68
NUP35-204ENST00000442895 HOXD11P31277 338 aaPredicted RBP10.51□□□□□ -0.73
NUP35-204ENST00000442895 DNAJC5BQ9UF47 199 aa10.32□□□□□ -0.76
NUP35-204ENST00000442895 RNF216Q9NWF9 866 aaPredicted RBP10.25□□□□□ -0.77
NUP35-204ENST00000442895 GRWD1Q9BQ67 446 aaKnown RBP eCLIP10.14□□□□□ -0.79
NUP35-204ENST00000442895 CNKSR2Q8WXI2 1034 aa10.13□□□□□ -0.79
NUP35-204ENST00000442895 PPP4R3CPQ6ZMV5 832 aa10.11□□□□□ -0.79
NUP35-204ENST00000442895 DSG3P32926 999 aa10.01□□□□□ -0.81
NUP35-204ENST00000442895 CAPN15O75808 1086 aa9.96□□□□□ -0.82
NUP35-204ENST00000442895 SP7Q8TDD2 431 aaPredicted RBP9.84□□□□□ -0.83
NUP35-204ENST00000442895 SPINK5Q9NQ38 1064 aaPredicted RBP9.84□□□□□ -0.83
NUP35-204ENST00000442895 CHRDL2Q6WN34 429 aa9.74□□□□□ -0.85
NUP35-204ENST00000442895 U3KPZ7 1027 aaPredicted RBP9.71□□□□□ -0.86
NUP35-204ENST00000442895 RBM42Q9BTD8 480 aaKnown RBP9.66□□□□□ -0.86
NUP35-204ENST00000442895 ABCB7O75027 752 aa9.61□□□□□ -0.87
NUP35-204ENST00000442895 TRHP20396 242 aaPredicted RBP9.59□□□□□ -0.87
NUP35-204ENST00000442895 NCBP3Q53F19 620 aaKnown RBP9.56□□□□□ -0.88
NUP35-204ENST00000442895 ZNF219Q9P2Y4 722 aaPredicted RBP9.52□□□□□ -0.89
NUP35-204ENST00000442895 APLP2Q06481 763 aa9.51□□□□□ -0.89
NUP35-204ENST00000442895 HAX1O00165 279 aa9.45□□□□□ -0.9
NUP35-204ENST00000442895 PLSCR2Q9NRY7 297 aa9.44□□□□□ -0.9
NUP35-204ENST00000442895 NPM3O75607 178 aaKnown RBP9.3□□□□□ -0.92
NUP35-204ENST00000442895 PIP4P2Q8N4L2 257 aa9.3□□□□□ -0.92
NUP35-204ENST00000442895 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.27□□□□□ -0.93
NUP35-204ENST00000442895 HNRNPUL2Q1KMD3 747 aaKnown RBP9.27□□□□□ -0.93
NUP35-204ENST00000442895 LHX8Q68G74 356 aa9.24□□□□□ -0.93
NUP35-204ENST00000442895 NISCHQ9Y2I1 1504 aa9.23□□□□□ -0.93
NUP35-204ENST00000442895 AKT1S1Q96B36 256 aa9.21□□□□□ -0.94
NUP35-204ENST00000442895 SAMD1Q6SPF0 538 aaPredicted RBP9.15□□□□□ -0.94
NUP35-204ENST00000442895 EVX2Q03828 476 aa9.14□□□□□ -0.95
NUP35-204ENST00000442895 REM2Q8IYK8 340 aaPredicted RBP9.13□□□□□ -0.95
NUP35-204ENST00000442895 POLA2Q14181 598 aa9.11□□□□□ -0.95
NUP35-204ENST00000442895 FXR2P51116 673 aaKnown RBP eCLIP9.09□□□□□ -0.95
NUP35-204ENST00000442895 SLC4A2P04920 1241 aa9.07□□□□□ -0.96
NUP35-204ENST00000442895 PITPNM1O00562 1244 aa9.02□□□□□ -0.97
NUP35-204ENST00000442895 GABBR2O75899 941 aa8.94□□□□□ -0.98
NUP35-204ENST00000442895 ZBTB12Q9Y330 459 aaPredicted RBP8.9□□□□□ -0.98
NUP35-204ENST00000442895 C19orf67A6NJJ6 358 aa8.84□□□□□ -0.99
NUP35-204ENST00000442895 OSCARQ8IYS5 282 aa8.82□□□□□ -1
NUP35-204ENST00000442895 PRKAR2AP13861 404 aaKnown RBP8.81□□□□□ -1
NUP35-204ENST00000442895 POTEMA6NI47 508 aa8.74□□□□□ -1.01
NUP35-204ENST00000442895 POTEGQ6S5H5 508 aa8.69□□□□□ -1.02
NUP35-204ENST00000442895 PCDH10Q9P2E7 1040 aa8.68□□□□□ -1.02
NUP35-204ENST00000442895 POTEIP0CG38 1075 aa8.67□□□□□ -1.02
NUP35-204ENST00000442895 MYCNP04198 464 aaPredicted RBP8.66□□□□□ -1.02
NUP35-204ENST00000442895 EHMT2Q96KQ7 1210 aa8.66□□□□□ -1.02
NUP35-204ENST00000442895 CLEC11AQ9Y240 323 aa8.65□□□□□ -1.02
NUP35-204ENST00000442895 KCNA4P22459 653 aa8.61□□□□□ -1.03
NUP35-204ENST00000442895 DCBLD2Q96PD2 775 aa8.61□□□□□ -1.03
NUP35-204ENST00000442895 SPDYE1Q8NFV5 336 aaPredicted RBP8.6□□□□□ -1.03
NUP35-204ENST00000442895 CLCN6P51797 869 aa8.57□□□□□ -1.04
NUP35-204ENST00000442895 OTUD5Q96G74 571 aa8.56□□□□□ -1.04
NUP35-204ENST00000442895 SPDYE2BA6NHP3 402 aa8.51□□□□□ -1.05
NUP35-204ENST00000442895 SPDYE6P0CI01 402 aa8.51□□□□□ -1.05
NUP35-204ENST00000442895 SPDYE2Q495Y8 402 aa8.51□□□□□ -1.05
NUP35-204ENST00000442895 CHADLQ6NUI6 762 aa8.5□□□□□ -1.05
NUP35-204ENST00000442895 CD44P16070 742 aaKnown RBP8.49□□□□□ -1.05
NUP35-204ENST00000442895 ATF5Q9Y2D1 282 aaPredicted RBP8.46□□□□□ -1.06
NUP35-204ENST00000442895 PRR29P0C7W0 189 aa8.39□□□□□ -1.07
NUP35-204ENST00000442895 POTEB2H3BUK9 544 aa8.37□□□□□ -1.07
NUP35-204ENST00000442895 FBLN2P98095 1184 aa8.34□□□□□ -1.07
NUP35-204ENST00000442895 FAM163AQ96GL9 167 aaPredicted RBP8.33□□□□□ -1.08
NUP35-204ENST00000442895 SLC4A1APQ9BWU0 796 aaKnown RBP8.33□□□□□ -1.08
NUP35-204ENST00000442895 ZNF692Q9BU19 519 aaPredicted RBP8.31□□□□□ -1.08
NUP35-204ENST00000442895 FARP1Q9Y4F1 1045 aaPredicted RBP8.31□□□□□ -1.08
NUP35-204ENST00000442895 CSRNP3Q8WYN3 585 aa8.3□□□□□ -1.08
NUP35-204ENST00000442895 ZNF579Q8NAF0 562 aaKnown RBP8.27□□□□□ -1.09
NUP35-204ENST00000442895 MAMSTRQ6ZN01 415 aa8.26□□□□□ -1.09
NUP35-204ENST00000442895 ZRANB1Q9UGI0 708 aa8.26□□□□□ -1.09
NUP35-204ENST00000442895 GALR2O43603 387 aaPredicted RBP8.23□□□□□ -1.09
NUP35-204ENST00000442895 SSUH2Q9Y2M2 353 aa8.23□□□□□ -1.09
NUP35-204ENST00000442895 LCE2DQ5TA82 110 aaPredicted RBP8.21□□□□□ -1.1
NUP35-204ENST00000442895 CDAN1Q8IWY9 1227 aa8.21□□□□□ -1.1
NUP35-204ENST00000442895 CCDC180Q9P1Z9 1646 aa8.18□□□□□ -1.1
NUP35-204ENST00000442895 SCUBE2Q9NQ36 999 aa8.15□□□□□ -1.1
NUP35-204ENST00000442895 PABPN1Q86U42 306 aaKnown RBP eCLIP8.13□□□□□ -1.11
NUP35-204ENST00000442895 PELP1Q8IZL8 1130 aaKnown RBP8.13□□□□□ -1.11
NUP35-204ENST00000442895 METRNQ9UJH8 293 aa8.13□□□□□ -1.11
NUP35-204ENST00000442895 C7P10643 843 aa8.11□□□□□ -1.11
NUP35-204ENST00000442895 FOXD4L1Q9NU39 408 aa8.11□□□□□ -1.11
NUP35-204ENST00000442895 POTEJP0CG39 1038 aa8.1□□□□□ -1.11
NUP35-204ENST00000442895 SLC39A7Q92504 469 aa8.09□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.6 ms