RNA–Protein interactions for RNA: ENST00000455063.5

NUP35-207, Transcript of nucleoporin 35, humanhuman

TSL 5

Gene NUP35, Length 342 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-207ENST00000455063 AEBP2Q6ZN18 517 aaPredicted RBP23.3■■□□□ 1.32
NUP35-207ENST00000455063 CHIC1Q5VXU3 224 aa21.73■■□□□ 1.07
NUP35-207ENST00000455063 SENP3Q9H4L4 574 aaPredicted RBP20.02■□□□□ 0.8
NUP35-207ENST00000455063 PHF23Q9BUL5 403 aaPredicted RBP19.61■□□□□ 0.73
NUP35-207ENST00000455063 POTEDQ86YR6 584 aa19.35■□□□□ 0.69
NUP35-207ENST00000455063 FOXD1Q16676 465 aa18.79■□□□□ 0.6
NUP35-207ENST00000455063 MSH5O43196 834 aa17.97■□□□□ 0.47
NUP35-207ENST00000455063 PIAS4Q8N2W9 510 aaPredicted RBP17.33■□□□□ 0.36
NUP35-207ENST00000455063 PPP6R1Q9UPN7 881 aa16.78■□□□□ 0.28
NUP35-207ENST00000455063 ADRA2BP18089 450 aa16.67■□□□□ 0.26
NUP35-207ENST00000455063 PLPPR3Q6T4P5 718 aa16.37■□□□□ 0.21
NUP35-207ENST00000455063 CACNB1Q02641 598 aaPredicted RBP16.09■□□□□ 0.17
NUP35-207ENST00000455063 DMRT2Q9Y5R5 561 aa15.71■□□□□ 0.11
NUP35-207ENST00000455063 MAPK8IP2Q13387 824 aaPredicted RBP15.63■□□□□ 0.09
NUP35-207ENST00000455063 RNF39Q9H2S5 420 aa15.25■□□□□ 0.03
NUP35-207ENST00000455063 SCAF1Q9H7N4 1312 aaKnown RBP15.2■□□□□ 0.02
NUP35-207ENST00000455063 DCAF8L1A6NGE4 600 aa15.17■□□□□ 0.02
NUP35-207ENST00000455063 C1QBPQ07021 282 aaKnown RBP14.95□□□□□ -0.02
NUP35-207ENST00000455063 POTEHQ6S545 545 aa14.95□□□□□ -0.02
NUP35-207ENST00000455063 HOXD11P31277 338 aaPredicted RBP14.7□□□□□ -0.06
NUP35-207ENST00000455063 DNAJC5BQ9UF47 199 aa14.36□□□□□ -0.11
NUP35-207ENST00000455063 RNF216Q9NWF9 866 aaPredicted RBP14.32□□□□□ -0.12
NUP35-207ENST00000455063 PPP4R3CPQ6ZMV5 832 aa14.22□□□□□ -0.13
NUP35-207ENST00000455063 CNKSR2Q8WXI2 1034 aa14.19□□□□□ -0.14
NUP35-207ENST00000455063 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.04□□□□□ -0.16
NUP35-207ENST00000455063 DSG3P32926 999 aa13.93□□□□□ -0.18
NUP35-207ENST00000455063 CAPN15O75808 1086 aa13.78□□□□□ -0.2
NUP35-207ENST00000455063 SPINK5Q9NQ38 1064 aaPredicted RBP13.76□□□□□ -0.21
NUP35-207ENST00000455063 U3KPZ7 1027 aaPredicted RBP13.63□□□□□ -0.23
NUP35-207ENST00000455063 SP7Q8TDD2 431 aaPredicted RBP13.53□□□□□ -0.24
NUP35-207ENST00000455063 CHRDL2Q6WN34 429 aa13.45□□□□□ -0.26
NUP35-207ENST00000455063 ABCB7O75027 752 aa13.4□□□□□ -0.26
NUP35-207ENST00000455063 NCBP3Q53F19 620 aaKnown RBP13.34□□□□□ -0.27
NUP35-207ENST00000455063 TRHP20396 242 aaPredicted RBP13.32□□□□□ -0.28
NUP35-207ENST00000455063 RBM42Q9BTD8 480 aaKnown RBP13.31□□□□□ -0.28
NUP35-207ENST00000455063 ZNF219Q9P2Y4 722 aaPredicted RBP13.22□□□□□ -0.29
NUP35-207ENST00000455063 NPM3O75607 178 aaKnown RBP13.18□□□□□ -0.3
NUP35-207ENST00000455063 APLP2Q06481 763 aa13.11□□□□□ -0.31
NUP35-207ENST00000455063 HAX1O00165 279 aa12.96□□□□□ -0.33
NUP35-207ENST00000455063 PIP4P2Q8N4L2 257 aa12.92□□□□□ -0.34
NUP35-207ENST00000455063 SLC4A2P04920 1241 aa12.85□□□□□ -0.35
NUP35-207ENST00000455063 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.84□□□□□ -0.35
NUP35-207ENST00000455063 HNRNPUL2Q1KMD3 747 aaKnown RBP12.84□□□□□ -0.35
NUP35-207ENST00000455063 PLSCR2Q9NRY7 297 aa12.79□□□□□ -0.36
NUP35-207ENST00000455063 AKT1S1Q96B36 256 aa12.78□□□□□ -0.36
NUP35-207ENST00000455063 EVX2Q03828 476 aa12.73□□□□□ -0.37
NUP35-207ENST00000455063 SAMD1Q6SPF0 538 aaPredicted RBP12.73□□□□□ -0.37
NUP35-207ENST00000455063 POLA2Q14181 598 aa12.71□□□□□ -0.37
NUP35-207ENST00000455063 REM2Q8IYK8 340 aaPredicted RBP12.68□□□□□ -0.38
NUP35-207ENST00000455063 LHX8Q68G74 356 aa12.67□□□□□ -0.38
NUP35-207ENST00000455063 FXR2P51116 673 aaKnown RBP eCLIP12.65□□□□□ -0.38
NUP35-207ENST00000455063 PITPNM1O00562 1244 aa12.58□□□□□ -0.4
NUP35-207ENST00000455063 GABBR2O75899 941 aa12.37□□□□□ -0.43
NUP35-207ENST00000455063 OSCARQ8IYS5 282 aa12.37□□□□□ -0.43
NUP35-207ENST00000455063 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
NUP35-207ENST00000455063 C19orf67A6NJJ6 358 aa12.28□□□□□ -0.44
NUP35-207ENST00000455063 PRKAR2AP13861 404 aaKnown RBP12.24□□□□□ -0.45
NUP35-207ENST00000455063 MYCNP04198 464 aaPredicted RBP12.2□□□□□ -0.46
NUP35-207ENST00000455063 POTEIP0CG38 1075 aa12.1□□□□□ -0.47
NUP35-207ENST00000455063 ATF5Q9Y2D1 282 aaPredicted RBP12.03□□□□□ -0.48
NUP35-207ENST00000455063 KCNA4P22459 653 aa12.01□□□□□ -0.49
NUP35-207ENST00000455063 POTEMA6NI47 508 aa12□□□□□ -0.49
NUP35-207ENST00000455063 CLEC11AQ9Y240 323 aa12□□□□□ -0.49
NUP35-207ENST00000455063 SPDYE1Q8NFV5 336 aaPredicted RBP11.94□□□□□ -0.5
NUP35-207ENST00000455063 POTEGQ6S5H5 508 aa11.93□□□□□ -0.5
NUP35-207ENST00000455063 SPDYE2BA6NHP3 402 aa11.88□□□□□ -0.51
NUP35-207ENST00000455063 SPDYE6P0CI01 402 aa11.88□□□□□ -0.51
NUP35-207ENST00000455063 SPDYE2Q495Y8 402 aa11.88□□□□□ -0.51
NUP35-207ENST00000455063 CHADLQ6NUI6 762 aa11.88□□□□□ -0.51
NUP35-207ENST00000455063 OTUD5Q96G74 571 aa11.86□□□□□ -0.51
NUP35-207ENST00000455063 DCBLD2Q96PD2 775 aa11.83□□□□□ -0.52
NUP35-207ENST00000455063 PCDH10Q9P2E7 1040 aa11.8□□□□□ -0.52
NUP35-207ENST00000455063 CD44P16070 742 aaKnown RBP11.78□□□□□ -0.52
NUP35-207ENST00000455063 CLCN6P51797 869 aa11.75□□□□□ -0.53
NUP35-207ENST00000455063 POTEB2H3BUK9 544 aa11.69□□□□□ -0.54
NUP35-207ENST00000455063 PRR29P0C7W0 189 aa11.63□□□□□ -0.55
NUP35-207ENST00000455063 FBLN2P98095 1184 aa11.61□□□□□ -0.55
NUP35-207ENST00000455063 SSUH2Q9Y2M2 353 aa11.61□□□□□ -0.55
NUP35-207ENST00000455063 ZNF692Q9BU19 519 aaPredicted RBP11.58□□□□□ -0.56
NUP35-207ENST00000455063 FARP1Q9Y4F1 1045 aaPredicted RBP11.57□□□□□ -0.56
NUP35-207ENST00000455063 ZNF579Q8NAF0 562 aaKnown RBP11.54□□□□□ -0.56
NUP35-207ENST00000455063 FOXD4L1Q9NU39 408 aa11.51□□□□□ -0.57
NUP35-207ENST00000455063 GALR2O43603 387 aaPredicted RBP11.5□□□□□ -0.57
NUP35-207ENST00000455063 LCE2DQ5TA82 110 aaPredicted RBP11.49□□□□□ -0.57
NUP35-207ENST00000455063 ZRANB1Q9UGI0 708 aa11.46□□□□□ -0.57
NUP35-207ENST00000455063 MKRN4PQ13434 485 aaPredicted RBP11.41□□□□□ -0.58
NUP35-207ENST00000455063 FAM163AQ96GL9 167 aaPredicted RBP11.41□□□□□ -0.58
NUP35-207ENST00000455063 PABPN1Q86U42 306 aaKnown RBP eCLIP11.39□□□□□ -0.59
NUP35-207ENST00000455063 PELP1Q8IZL8 1130 aaKnown RBP11.36□□□□□ -0.59
NUP35-207ENST00000455063 POTEJP0CG39 1038 aa11.35□□□□□ -0.59
NUP35-207ENST00000455063 MAMSTRQ6ZN01 415 aa11.3□□□□□ -0.6
NUP35-207ENST00000455063 METRNQ9UJH8 293 aa11.29□□□□□ -0.6
NUP35-207ENST00000455063 CDAN1Q8IWY9 1227 aa11.28□□□□□ -0.6
NUP35-207ENST00000455063 ATXN8OSP0DMR3 200 aa11.23□□□□□ -0.61
NUP35-207ENST00000455063 PHF12Q96QT6 1004 aa11.23□□□□□ -0.61
NUP35-207ENST00000455063 SLC39A7Q92504 469 aa11.2□□□□□ -0.62
NUP35-207ENST00000455063 SCUBE2Q9NQ36 999 aa11.2□□□□□ -0.62
NUP35-207ENST00000455063 C7P10643 843 aa11.19□□□□□ -0.62
NUP35-207ENST00000455063 ASTLQ6HA08 431 aaPredicted RBP11.15□□□□□ -0.62
NUP35-207ENST00000455063 ATMINO43313 823 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms