RNA–Protein interactions for RNA: ENST00000557682.6

LINC01578-209, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 2,683 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-209ENST00000557682 NISCHQ9Y2I1 1504 aa48.31■■■■■ 5.32
LINC01578-209ENST00000557682 SHROOM4Q9ULL8 1493 aa41.27■■■■■ 4.2
LINC01578-209ENST00000557682 CCDC180Q9P1Z9 1646 aa41.08■■■■■ 4.17
LINC01578-209ENST00000557682 ZCCHC6Q5VYS8 1495 aaKnown RBP40.81■■■■■ 4.12
LINC01578-209ENST00000557682 DCAF8L2P0C7V8 631 aa40.36■■■■■ 4.05
LINC01578-209ENST00000557682 SUPT5HO00267 1087 aaKnown RBP40.29■■■■■ 4.04
LINC01578-209ENST00000557682 DCAF1Q9Y4B6 1507 aa39.49■■■■□ 3.91
LINC01578-209ENST00000557682 CHIC1Q5VXU3 224 aa38.94■■■■□ 3.82
LINC01578-209ENST00000557682 MYO15BQ96JP2 1530 aa38.85■■■■□ 3.81
LINC01578-209ENST00000557682 SCRIBQ14160 1630 aa38.7■■■■□ 3.79
LINC01578-209ENST00000557682 ABCC9O60706 1549 aa38.54■■■■□ 3.76
LINC01578-209ENST00000557682 RSF1Q96T23 1441 aaPredicted RBP38.19■■■■□ 3.7
LINC01578-209ENST00000557682 NACADO15069 1562 aa38.06■■■■□ 3.68
LINC01578-209ENST00000557682 LOC105371045A0A1W2PR82 267 aa37.91■■■■□ 3.66
LINC01578-209ENST00000557682 CECR2Q9BXF3 1484 aa37.84■■■■□ 3.65
LINC01578-209ENST00000557682 RB1CC1Q8TDY2 1594 aa37.83■■■■□ 3.65
LINC01578-209ENST00000557682 MROH2BQ7Z745 1585 aa37.64■■■■□ 3.62
LINC01578-209ENST00000557682 PCGF6Q9BYE7 350 aa37.54■■■■□ 3.6
LINC01578-209ENST00000557682 WIZO95785 1651 aa37.44■■■■□ 3.58
LINC01578-209ENST00000557682 HRCP23327 699 aa37.44■■■■□ 3.58
LINC01578-209ENST00000557682 TRIM41Q8WV44 630 aa37.43■■■■□ 3.58
LINC01578-209ENST00000557682 FAM9AQ8IZU1 332 aaPredicted RBP37.29■■■■□ 3.56
LINC01578-209ENST00000557682 EHMT2Q96KQ7 1210 aa37.12■■■■□ 3.53
LINC01578-209ENST00000557682 UNC13AQ9UPW8 1703 aa37.09■■■■□ 3.53
LINC01578-209ENST00000557682 BAZ1AQ9NRL2 1556 aaPredicted RBP37.08■■■■□ 3.53
LINC01578-209ENST00000557682 PABPN1Q86U42 306 aaKnown RBP eCLIP36.87■■■■□ 3.49
LINC01578-209ENST00000557682 SMARCA4P51532 1647 aa36.86■■■■□ 3.49
LINC01578-209ENST00000557682 PPARGC1BQ86YN6 1023 aaKnown RBP36.75■■■■□ 3.47
LINC01578-209ENST00000557682 EIF4G1Q04637 1599 aaKnown RBP36.75■■■■□ 3.47
LINC01578-209ENST00000557682 TOP2AP11388 1531 aaKnown RBP36.73■■■■□ 3.47
LINC01578-209ENST00000557682 TRIM26Q12899 539 aaPredicted RBP36.72■■■■□ 3.47
LINC01578-209ENST00000557682 CCDC88BA6NC98 1476 aa36.64■■■■□ 3.46
LINC01578-209ENST00000557682 BICRAQ9NZM4 1560 aa36.63■■■■□ 3.45
LINC01578-209ENST00000557682 SMARCA2P51531 1590 aa36.58■■■■□ 3.45
LINC01578-209ENST00000557682 ABCC8Q09428 1581 aa36.57■■■■□ 3.44
LINC01578-209ENST00000557682 SOGA1O94964 1423 aa36.15■■■■□ 3.38
LINC01578-209ENST00000557682 PEG3Q9GZU2 1588 aa36.07■■■■□ 3.36
LINC01578-209ENST00000557682 RUSC2Q8N2Y8 1516 aa36.03■■■■□ 3.36
LINC01578-209ENST00000557682 ATAD2BQ9ULI0 1458 aa35.99■■■■□ 3.35
LINC01578-209ENST00000557682 BAZ1BQ9UIG0 1483 aaKnown RBP35.88■■■■□ 3.33
LINC01578-209ENST00000557682 WRNQ14191 1432 aaPredicted RBP eCLIP35.86■■■■□ 3.33
LINC01578-209ENST00000557682 TTBK1Q5TCY1 1321 aaPredicted RBP35.83■■■■□ 3.33
LINC01578-209ENST00000557682 CSRNP3Q8WYN3 585 aa35.81■■■■□ 3.32
LINC01578-209ENST00000557682 CEP162Q5TB80 1403 aa35.79■■■■□ 3.32
LINC01578-209ENST00000557682 SYNJ1O43426 1573 aa35.76■■■■□ 3.32
LINC01578-209ENST00000557682 UBTFP17480 764 aaKnown RBP35.72■■■■□ 3.31
LINC01578-209ENST00000557682 TNIKQ9UKE5 1360 aa35.65■■■■□ 3.3
LINC01578-209ENST00000557682 EEA1Q15075 1411 aa35.65■■■■□ 3.3
LINC01578-209ENST00000557682 ZEB1P37275 1124 aaPredicted RBP35.63■■■■□ 3.29
LINC01578-209ENST00000557682 GOLGA3Q08378 1498 aa35.52■■■■□ 3.28
LINC01578-209ENST00000557682 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP35.51■■■■□ 3.28
LINC01578-209ENST00000557682 CEP164Q9UPV0 1460 aa35.33■■■■□ 3.25
LINC01578-209ENST00000557682 CCER1Q8TC90 406 aaPredicted RBP35.29■■■■□ 3.24
LINC01578-209ENST00000557682 RANGAP1P46060 587 aaPredicted RBP35.28■■■■□ 3.24
LINC01578-209ENST00000557682 KIF21BO75037 1637 aa35.27■■■■□ 3.24
LINC01578-209ENST00000557682 NCAPD3P42695 1498 aa35.26■■■■□ 3.24
LINC01578-209ENST00000557682 RAPGEF2Q9Y4G8 1499 aa35.26■■■■□ 3.23
LINC01578-209ENST00000557682 TOP2BQ02880 1626 aa35.24■■■■□ 3.23
LINC01578-209ENST00000557682 HMGXB3Q12766 1538 aa35.22■■■■□ 3.23
LINC01578-209ENST00000557682 CLIP1P30622 1438 aa35.16■■■■□ 3.22
LINC01578-209ENST00000557682 PELP1Q8IZL8 1130 aaKnown RBP35.15■■■■□ 3.22
LINC01578-209ENST00000557682 BIVM-ERCC5R4GMW8 1640 aa35.09■■■■□ 3.21
LINC01578-209ENST00000557682 CUX1P39880 1505 aa35.04■■■■□ 3.2
LINC01578-209ENST00000557682 SCAF1Q9H7N4 1312 aaKnown RBP34.95■■■■□ 3.19
LINC01578-209ENST00000557682 CFTRP13569 1480 aa34.95■■■■□ 3.18
LINC01578-209ENST00000557682 VPS8Q8N3P4 1428 aa34.94■■■■□ 3.18
LINC01578-209ENST00000557682 HNRNPUL2Q1KMD3 747 aaKnown RBP34.85■■■■□ 3.17
LINC01578-209ENST00000557682 PRXQ9BXM0 1461 aa34.84■■■■□ 3.17
LINC01578-209ENST00000557682 APLP2Q06481 763 aa34.75■■■■□ 3.15
LINC01578-209ENST00000557682 ERICH3Q5RHP9 1530 aa34.73■■■■□ 3.15
LINC01578-209ENST00000557682 KIF27Q86VH2 1401 aa34.73■■■■□ 3.15
LINC01578-209ENST00000557682 ARAP1Q96P48 1450 aa34.65■■■■□ 3.14
LINC01578-209ENST00000557682 CC2D2AQ9P2K1 1620 aa34.62■■■■□ 3.13
LINC01578-209ENST00000557682 CADPSQ9ULU8 1353 aa34.62■■■■□ 3.13
LINC01578-209ENST00000557682 PRDM2Q13029 1718 aa34.57■■■■□ 3.13
LINC01578-209ENST00000557682 CUX2O14529 1486 aa34.54■■■■□ 3.12
LINC01578-209ENST00000557682 KANK4Q5T7N3 995 aaPredicted RBP34.52■■■■□ 3.12
LINC01578-209ENST00000557682 FGD5Q6ZNL6 1462 aa34.46■■■■□ 3.11
LINC01578-209ENST00000557682 IGF1RP08069 1367 aa34.43■■■■□ 3.1
LINC01578-209ENST00000557682 DIEXFQ68CQ4 756 aaKnown RBP34.41■■■■□ 3.1
LINC01578-209ENST00000557682 ARHGAP35Q9NRY4 1499 aa34.4■■■■□ 3.1
LINC01578-209ENST00000557682 ACIN1Q9UKV3 1341 aaKnown RBP34.39■■■■□ 3.1
LINC01578-209ENST00000557682 FANCD2Q9BXW9 1451 aa34.33■■■■□ 3.09
LINC01578-209ENST00000557682 NESP48681 1621 aa34.3■■■■□ 3.08
LINC01578-209ENST00000557682 NEUROD1Q13562 356 aa34.27■■■■□ 3.08
LINC01578-209ENST00000557682 CARMIL1Q5VZK9 1371 aa34.27■■■■□ 3.08
LINC01578-209ENST00000557682 RAD54L2Q9Y4B4 1467 aa34.21■■■■□ 3.07
LINC01578-209ENST00000557682 ZNF316A6NFI3 1004 aaPredicted RBP34.18■■■■□ 3.06
LINC01578-209ENST00000557682 CENPBP07199 599 aaPredicted RBP34.12■■■■□ 3.05
LINC01578-209ENST00000557682 P3H3Q8IVL6 736 aa34.11■■■■□ 3.05
LINC01578-209ENST00000557682 DNAJC5BQ9UF47 199 aa34.09■■■■□ 3.05
LINC01578-209ENST00000557682 ITGAEP38570 1179 aa34.08■■■■□ 3.05
LINC01578-209ENST00000557682 POLA1P09884 1462 aaPredicted RBP34.08■■■■□ 3.05
LINC01578-209ENST00000557682 TOPBP1Q92547 1522 aa34.08■■■■□ 3.05
LINC01578-209ENST00000557682 DNMBPQ6XZF7 1577 aa34.06■■■■□ 3.04
LINC01578-209ENST00000557682 RRBP1Q9P2E9 1410 aaKnown RBP34.06■■■■□ 3.04
LINC01578-209ENST00000557682 GTF3C3Q9Y5Q9 886 aa34.03■■■■□ 3.04
LINC01578-209ENST00000557682 DHX57Q6P158 1386 aaKnown RBP34.02■■■■□ 3.04
LINC01578-209ENST00000557682 CCNB3Q8WWL7 1395 aa33.98■■■■□ 3.03
LINC01578-209ENST00000557682 ABCA10Q8WWZ4 1543 aa33.95■■■■□ 3.03
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms