RNA–Protein interactions for RNA: ENST00000553829.1

LINC01578-201, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 732 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-201ENST00000553829 NISCHQ9Y2I1 1504 aa70.93■■■■■ 8.95
LINC01578-201ENST00000553829 CCDC180Q9P1Z9 1646 aa63.19■■■■■ 7.71
LINC01578-201ENST00000553829 ABCC9O60706 1549 aa62.1■■■■■ 7.53
LINC01578-201ENST00000553829 RB1CC1Q8TDY2 1594 aa59.62■■■■■ 7.13
LINC01578-201ENST00000553829 NACADO15069 1562 aa59.5■■■■■ 7.12
LINC01578-201ENST00000553829 DCAF8L2P0C7V8 631 aa59.43■■■■■ 7.1
LINC01578-201ENST00000553829 MYO15BQ96JP2 1530 aa59.05■■■■■ 7.04
LINC01578-201ENST00000553829 ZCCHC6Q5VYS8 1495 aaKnown RBP58.98■■■■■ 7.03
LINC01578-201ENST00000553829 DCAF1Q9Y4B6 1507 aa58.68■■■■■ 6.98
LINC01578-201ENST00000553829 UNC13AQ9UPW8 1703 aa58.33■■■■■ 6.93
LINC01578-201ENST00000553829 PABPN1Q86U42 306 aaKnown RBP eCLIP58.02■■■■■ 6.88
LINC01578-201ENST00000553829 BICRAQ9NZM4 1560 aa57.85■■■■■ 6.85
LINC01578-201ENST00000553829 SCRIBQ14160 1630 aa57.58■■■■■ 6.81
LINC01578-201ENST00000553829 DNAJC5BQ9UF47 199 aa57.37■■■■■ 6.77
LINC01578-201ENST00000553829 SHROOM4Q9ULL8 1493 aa57.17■■■■■ 6.74
LINC01578-201ENST00000553829 EIF4G1Q04637 1599 aaKnown RBP56.33■■■■■ 6.61
LINC01578-201ENST00000553829 CC2D2AQ9P2K1 1620 aa56.19■■■■■ 6.59
LINC01578-201ENST00000553829 CECR2Q9BXF3 1484 aa55.84■■■■■ 6.53
LINC01578-201ENST00000553829 SMARCA4P51532 1647 aa55.09■■■■■ 6.41
LINC01578-201ENST00000553829 BAZ1AQ9NRL2 1556 aaPredicted RBP54.98■■■■■ 6.39
LINC01578-201ENST00000553829 NCAPD3P42695 1498 aa54.92■■■■■ 6.38
LINC01578-201ENST00000553829 ATAD2BQ9ULI0 1458 aa54.88■■■■■ 6.38
LINC01578-201ENST00000553829 SMARCA2P51531 1590 aa54.8■■■■■ 6.36
LINC01578-201ENST00000553829 MROH2BQ7Z745 1585 aa54.65■■■■■ 6.34
LINC01578-201ENST00000553829 PEG3Q9GZU2 1588 aa54.58■■■■■ 6.33
LINC01578-201ENST00000553829 HMGXB3Q12766 1538 aa54.57■■■■■ 6.33
LINC01578-201ENST00000553829 BAZ1BQ9UIG0 1483 aaKnown RBP54.38■■■■■ 6.3
LINC01578-201ENST00000553829 WIZO95785 1651 aa54.07■■■■■ 6.25
LINC01578-201ENST00000553829 RSF1Q96T23 1441 aaPredicted RBP53.93■■■■■ 6.22
LINC01578-201ENST00000553829 NESP48681 1621 aa53.66■■■■■ 6.18
LINC01578-201ENST00000553829 ERCC6Q03468 1493 aa53.53■■■■■ 6.16
LINC01578-201ENST00000553829 LAMC3Q9Y6N6 1575 aa53.5■■■■■ 6.16
LINC01578-201ENST00000553829 TOP2AP11388 1531 aaKnown RBP53.43■■■■■ 6.14
LINC01578-201ENST00000553829 CADPSQ9ULU8 1353 aa53.3■■■■■ 6.12
LINC01578-201ENST00000553829 PDS5BQ9NTI5 1447 aa53.16■■■■■ 6.1
LINC01578-201ENST00000553829 CUX2O14529 1486 aa53.1■■■■■ 6.09
LINC01578-201ENST00000553829 KIF21AQ7Z4S6 1674 aa53.04■■■■■ 6.08
LINC01578-201ENST00000553829 CFTRP13569 1480 aa52.9■■■■■ 6.06
LINC01578-201ENST00000553829 THOC2Q8NI27 1593 aaKnown RBP52.89■■■■■ 6.06
LINC01578-201ENST00000553829 CCDC88BA6NC98 1476 aa52.86■■■■■ 6.05
LINC01578-201ENST00000553829 FANCD2Q9BXW9 1451 aa52.65■■■■■ 6.02
LINC01578-201ENST00000553829 CEP164Q9UPV0 1460 aa52.61■■■■■ 6.01
LINC01578-201ENST00000553829 MRC2Q9UBG0 1479 aa52.59■■■■■ 6.01
LINC01578-201ENST00000553829 PRDM2Q13029 1718 aa52.51■■■■■ 6
LINC01578-201ENST00000553829 WDR62O43379 1518 aa52.43■■■■■ 5.98
LINC01578-201ENST00000553829 SUPT5HO00267 1087 aaKnown RBP52.35■■■■■ 5.97
LINC01578-201ENST00000553829 URB2Q14146 1524 aaKnown RBP52.15■■■■■ 5.94
LINC01578-201ENST00000553829 DNAJC5Q9H3Z4 198 aa51.92■■■■■ 5.9
LINC01578-201ENST00000553829 ABCC8Q09428 1581 aa51.81■■■■■ 5.88
LINC01578-201ENST00000553829 TOPBP1Q92547 1522 aa51.79■■■■■ 5.88
LINC01578-201ENST00000553829 DNMBPQ6XZF7 1577 aa51.69■■■■■ 5.86
LINC01578-201ENST00000553829 IFT140Q96RY7 1462 aa51.53■■■■■ 5.84
LINC01578-201ENST00000553829 POLA1P09884 1462 aaPredicted RBP51.32■■■■■ 5.81
LINC01578-201ENST00000553829 ZNF608Q9ULD9 1512 aaPredicted RBP51.32■■■■■ 5.81
LINC01578-201ENST00000553829 CUX1P39880 1505 aa51.28■■■■■ 5.8
LINC01578-201ENST00000553829 TARBP1Q13395 1621 aaKnown RBP51.27■■■■■ 5.8
LINC01578-201ENST00000553829 FGD5Q6ZNL6 1462 aa51.15■■■■■ 5.78
LINC01578-201ENST00000553829 SOGA1O94964 1423 aa51.14■■■■■ 5.78
LINC01578-201ENST00000553829 RAD54L2Q9Y4B4 1467 aa51.11■■■■■ 5.77
LINC01578-201ENST00000553829 EIF4G3O43432 1585 aaKnown RBP51.08■■■■■ 5.77
LINC01578-201ENST00000553829 AQRO60306 1485 aaKnown RBP eCLIP51.02■■■■■ 5.762e-20■■■■■ 27.6
LINC01578-201ENST00000553829 OSCARQ8IYS5 282 aa50.93■■■■■ 5.74
LINC01578-201ENST00000553829 TDRD9Q8NDG6 1382 aaKnown RBP50.88■■■■■ 5.74
LINC01578-201ENST00000553829 WRNQ14191 1432 aaPredicted RBP eCLIP50.84■■■■■ 5.73
LINC01578-201ENST00000553829 WDR97A6NE52 1622 aa50.83■■■■■ 5.73
LINC01578-201ENST00000553829 BIVM-ERCC5R4GMW8 1640 aa50.77■■■■■ 5.72
LINC01578-201ENST00000553829 TOP2BQ02880 1626 aa50.76■■■■■ 5.72
LINC01578-201ENST00000553829 SYNJ1O43426 1573 aa50.71■■■■■ 5.71
LINC01578-201ENST00000553829 ABCA10Q8WWZ4 1543 aa50.65■■■■■ 5.7
LINC01578-201ENST00000553829 GRIN2BQ13224 1484 aa50.55■■■■■ 5.68
LINC01578-201ENST00000553829 CHD1O14646 1710 aa50.54■■■■■ 5.68
LINC01578-201ENST00000553829 GAPVD1Q14C86 1478 aa50.52■■■■■ 5.68
LINC01578-201ENST00000553829 SNAPC4Q5SXM2 1469 aa50.49■■■■■ 5.67
LINC01578-201ENST00000553829 FBLN2P98095 1184 aa50.48■■■■■ 5.67
LINC01578-201ENST00000553829 ABCA5Q8WWZ7 1642 aa50.46■■■■■ 5.67
LINC01578-201ENST00000553829 MAGI1Q96QZ7 1491 aaPredicted RBP50.45■■■■■ 5.67
LINC01578-201ENST00000553829 PBRM1Q86U86 1689 aa50.43■■■■■ 5.66
LINC01578-201ENST00000553829 CHMP7Q8WUX9 453 aaPredicted RBP50.31■■■■■ 5.64
LINC01578-201ENST00000553829 SYNJ2O15056 1496 aa50.26■■■■■ 5.64
LINC01578-201ENST00000553829 RIMBP3CA6NJZ7 1639 aa50.08■■■■■ 5.61
LINC01578-201ENST00000553829 RIMBP3BA6NNM3 1639 aa50.08■■■■■ 5.61
LINC01578-201ENST00000553829 RIMBP3Q9UFD9 1639 aa50.08■■■■■ 5.61
LINC01578-201ENST00000553829 ERICH3Q5RHP9 1530 aa50.05■■■■■ 5.6
LINC01578-201ENST00000553829 ARHGEF11O15085 1522 aa50.02■■■■■ 5.6
LINC01578-201ENST00000553829 TRIM41Q8WV44 630 aa50.02■■■■■ 5.6
LINC01578-201ENST00000553829 ADAMTS12P58397 1594 aa49.97■■■■■ 5.59
LINC01578-201ENST00000553829 CLASP1Q7Z460 1538 aa49.96■■■■■ 5.59
LINC01578-201ENST00000553829 FHAD1B1AJZ9 1412 aa49.93■■■■■ 5.58
LINC01578-201ENST00000553829 GRIN2AQ12879 1464 aa49.89■■■■■ 5.58
LINC01578-201ENST00000553829 KIF27Q86VH2 1401 aa49.81■■■■■ 5.56
LINC01578-201ENST00000553829 NUP160Q12769 1436 aa49.69■■■■■ 5.55
LINC01578-201ENST00000553829 IGF1RP08069 1367 aa49.69■■■■■ 5.55
LINC01578-201ENST00000553829 CEP170Q5SW79 1584 aa49.66■■■■■ 5.54
LINC01578-201ENST00000553829 CYB5RLQ6IPT4 315 aa49.65■■■■■ 5.54
LINC01578-201ENST00000553829 ARAP1Q96P48 1450 aa49.59■■■■■ 5.53
LINC01578-201ENST00000553829 CUL7Q14999 1698 aa49.52■■■■■ 5.52
LINC01578-201ENST00000553829 CARMIL1Q5VZK9 1371 aa49.38■■■■■ 5.5
LINC01578-201ENST00000553829 SHROOM2Q13796 1616 aa49.36■■■■■ 5.49
LINC01578-201ENST00000553829 RUSC2Q8N2Y8 1516 aa49.29■■■■■ 5.48
LINC01578-201ENST00000553829 JPH4Q96JJ6 628 aa49.26■■■■■ 5.48
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms