RNA–Protein interactions for RNA: ENST00000485560.5

ZNF248-206, Transcript of zinc finger protein 248, humanhuman

TSL 1 (best)

Gene ZNF248, Length 1,705 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF248-206ENST00000485560 NISCHQ9Y2I1 1504 aa37.52■■■■□ 3.6
ZNF248-206ENST00000485560 CCDC180Q9P1Z9 1646 aa32.95■■■□□ 2.87
ZNF248-206ENST00000485560 ABCC9O60706 1549 aa31.48■■■□□ 2.63
ZNF248-206ENST00000485560 ZCCHC6Q5VYS8 1495 aaKnown RBP31.43■■■□□ 2.62
ZNF248-206ENST00000485560 DCAF8L2P0C7V8 631 aa31.07■■■□□ 2.56
ZNF248-206ENST00000485560 DCAF1Q9Y4B6 1507 aa31.02■■■□□ 2.56
ZNF248-206ENST00000485560 MYO15BQ96JP2 1530 aa30.81■■■□□ 2.52
ZNF248-206ENST00000485560 NACADO15069 1562 aa30.75■■■□□ 2.51
ZNF248-206ENST00000485560 RB1CC1Q8TDY2 1594 aa30.59■■■□□ 2.49
ZNF248-206ENST00000485560 SHROOM4Q9ULL8 1493 aa30.28■■■□□ 2.44
ZNF248-206ENST00000485560 SCRIBQ14160 1630 aa30.21■■■□□ 2.43
ZNF248-206ENST00000485560 UNC13AQ9UPW8 1703 aa30.05■■■□□ 2.4
ZNF248-206ENST00000485560 BICRAQ9NZM4 1560 aa29.7■■■□□ 2.34
ZNF248-206ENST00000485560 PABPN1Q86U42 306 aaKnown RBP eCLIP29.59■■■□□ 2.33
ZNF248-206ENST00000485560 CECR2Q9BXF3 1484 aa29.19■■■□□ 2.26
ZNF248-206ENST00000485560 BAZ1AQ9NRL2 1556 aaPredicted RBP29■■■□□ 2.23
ZNF248-206ENST00000485560 MROH2BQ7Z745 1585 aa28.97■■■□□ 2.23
ZNF248-206ENST00000485560 SMARCA4P51532 1647 aa28.95■■■□□ 2.23
ZNF248-206ENST00000485560 RSF1Q96T23 1441 aaPredicted RBP28.93■■■□□ 2.22
ZNF248-206ENST00000485560 SUPT5HO00267 1087 aaKnown RBP28.92■■■□□ 2.22
ZNF248-206ENST00000485560 EIF4G1Q04637 1599 aaKnown RBP28.82■■■□□ 2.2
ZNF248-206ENST00000485560 WIZO95785 1651 aa28.74■■■□□ 2.19
ZNF248-206ENST00000485560 PEG3Q9GZU2 1588 aa28.61■■■□□ 2.17
ZNF248-206ENST00000485560 ATAD2BQ9ULI0 1458 aa28.55■■■□□ 2.16
ZNF248-206ENST00000485560 SMARCA2P51531 1590 aa28.53■■■□□ 2.16
ZNF248-206ENST00000485560 CC2D2AQ9P2K1 1620 aa28.51■■■□□ 2.15
ZNF248-206ENST00000485560 DNAJC5BQ9UF47 199 aa28.51■■■□□ 2.15
ZNF248-206ENST00000485560 TOP2AP11388 1531 aaKnown RBP28.41■■■□□ 2.14
ZNF248-206ENST00000485560 NCAPD3P42695 1498 aa28.37■■■□□ 2.13
ZNF248-206ENST00000485560 BAZ1BQ9UIG0 1483 aaKnown RBP28.36■■■□□ 2.13
ZNF248-206ENST00000485560 HMGXB3Q12766 1538 aa28.31■■■□□ 2.12
ZNF248-206ENST00000485560 CCDC88BA6NC98 1476 aa28.1■■■□□ 2.09
ZNF248-206ENST00000485560 CFTRP13569 1480 aa27.63■■■□□ 2.01
ZNF248-206ENST00000485560 CADPSQ9ULU8 1353 aa27.6■■■□□ 2.01
ZNF248-206ENST00000485560 PRDM2Q13029 1718 aa27.56■■■□□ 2
ZNF248-206ENST00000485560 NESP48681 1621 aa27.52■■■□□ 2
ZNF248-206ENST00000485560 LAMC3Q9Y6N6 1575 aa27.49■■□□□ 1.99
ZNF248-206ENST00000485560 CHIC1Q5VXU3 224 aa27.47■■□□□ 1.99
ZNF248-206ENST00000485560 ABCC8Q09428 1581 aa27.4■■□□□ 1.98
ZNF248-206ENST00000485560 FANCD2Q9BXW9 1451 aa27.31■■□□□ 1.96
ZNF248-206ENST00000485560 PDS5BQ9NTI5 1447 aa27.26■■□□□ 1.95
ZNF248-206ENST00000485560 WRNQ14191 1432 aaPredicted RBP eCLIP27.24■■□□□ 1.95
ZNF248-206ENST00000485560 KIF21AQ7Z4S6 1674 aa27.24■■□□□ 1.95
ZNF248-206ENST00000485560 TRIM41Q8WV44 630 aa27.22■■□□□ 1.95
ZNF248-206ENST00000485560 CEP164Q9UPV0 1460 aa27.18■■□□□ 1.94
ZNF248-206ENST00000485560 SYNJ1O43426 1573 aa27.18■■□□□ 1.94
ZNF248-206ENST00000485560 CUX1P39880 1505 aa27.12■■□□□ 1.93
ZNF248-206ENST00000485560 TOP2BQ02880 1626 aa27.1■■□□□ 1.93
ZNF248-206ENST00000485560 BIVM-ERCC5R4GMW8 1640 aa27.09■■□□□ 1.93
ZNF248-206ENST00000485560 ERCC6Q03468 1493 aa27.02■■□□□ 1.92
ZNF248-206ENST00000485560 URB2Q14146 1524 aaKnown RBP27■■□□□ 1.91
ZNF248-206ENST00000485560 DNMBPQ6XZF7 1577 aa27■■□□□ 1.91
ZNF248-206ENST00000485560 TOPBP1Q92547 1522 aa26.98■■□□□ 1.91
ZNF248-206ENST00000485560 MRC2Q9UBG0 1479 aa26.95■■□□□ 1.9
ZNF248-206ENST00000485560 FGD5Q6ZNL6 1462 aa26.88■■□□□ 1.89
ZNF248-206ENST00000485560 THOC2Q8NI27 1593 aaKnown RBP26.88■■□□□ 1.89
ZNF248-206ENST00000485560 WDR62O43379 1518 aa26.84■■□□□ 1.89
ZNF248-206ENST00000485560 POLA1P09884 1462 aaPredicted RBP26.81■■□□□ 1.88
ZNF248-206ENST00000485560 SOGA1O94964 1423 aa26.77■■□□□ 1.88
ZNF248-206ENST00000485560 RAD54L2Q9Y4B4 1467 aa26.72■■□□□ 1.87
ZNF248-206ENST00000485560 RUSC2Q8N2Y8 1516 aa26.71■■□□□ 1.87
ZNF248-206ENST00000485560 FAM9AQ8IZU1 332 aaPredicted RBP26.71■■□□□ 1.87
ZNF248-206ENST00000485560 CUX2O14529 1486 aa26.65■■□□□ 1.86
ZNF248-206ENST00000485560 WDR97A6NE52 1622 aa26.64■■□□□ 1.85
ZNF248-206ENST00000485560 TARBP1Q13395 1621 aaKnown RBP26.63■■□□□ 1.85
ZNF248-206ENST00000485560 ABCA10Q8WWZ4 1543 aa26.63■■□□□ 1.85
ZNF248-206ENST00000485560 EEA1Q15075 1411 aa26.61■■□□□ 1.85
ZNF248-206ENST00000485560 KIF27Q86VH2 1401 aa26.58■■□□□ 1.85
ZNF248-206ENST00000485560 IFT140Q96RY7 1462 aa26.55■■□□□ 1.84
ZNF248-206ENST00000485560 CSRNP3Q8WYN3 585 aa26.51■■□□□ 1.83
ZNF248-206ENST00000485560 TDRD9Q8NDG6 1382 aaKnown RBP26.48■■□□□ 1.83
ZNF248-206ENST00000485560 ABCA5Q8WWZ7 1642 aa26.48■■□□□ 1.83
ZNF248-206ENST00000485560 ZNF608Q9ULD9 1512 aaPredicted RBP26.43■■□□□ 1.82
ZNF248-206ENST00000485560 GAPVD1Q14C86 1478 aa26.41■■□□□ 1.82
ZNF248-206ENST00000485560 LOC105371045A0A1W2PR82 267 aa26.41■■□□□ 1.82
ZNF248-206ENST00000485560 AQRO60306 1485 aaKnown RBP eCLIP26.39■■□□□ 1.82
ZNF248-206ENST00000485560 IGF1RP08069 1367 aa26.39■■□□□ 1.81
ZNF248-206ENST00000485560 PBRM1Q86U86 1689 aa26.36■■□□□ 1.81
ZNF248-206ENST00000485560 EIF4G3O43432 1585 aaKnown RBP26.36■■□□□ 1.81
ZNF248-206ENST00000485560 EHMT2Q96KQ7 1210 aa26.35■■□□□ 1.81
ZNF248-206ENST00000485560 KIF21BO75037 1637 aa26.33■■□□□ 1.81
ZNF248-206ENST00000485560 ERICH3Q5RHP9 1530 aa26.31■■□□□ 1.8
ZNF248-206ENST00000485560 PRXQ9BXM0 1461 aa26.3■■□□□ 1.8
ZNF248-206ENST00000485560 GRIN2BQ13224 1484 aa26.27■■□□□ 1.8
ZNF248-206ENST00000485560 CUL7Q14999 1698 aa26.26■■□□□ 1.79
ZNF248-206ENST00000485560 CARMIL1Q5VZK9 1371 aa26.25■■□□□ 1.79
ZNF248-206ENST00000485560 RAPGEF2Q9Y4G8 1499 aa26.25■■□□□ 1.79
ZNF248-206ENST00000485560 GOLGA3Q08378 1498 aa26.24■■□□□ 1.79
ZNF248-206ENST00000485560 ADAMTS12P58397 1594 aa26.15■■□□□ 1.78
ZNF248-206ENST00000485560 SNAPC4Q5SXM2 1469 aa26.14■■□□□ 1.78
ZNF248-206ENST00000485560 UBTFP17480 764 aaKnown RBP26.13■■□□□ 1.77
ZNF248-206ENST00000485560 FHAD1B1AJZ9 1412 aa26.11■■□□□ 1.77
ZNF248-206ENST00000485560 MAGI1Q96QZ7 1491 aaPredicted RBP26.09■■□□□ 1.77
ZNF248-206ENST00000485560 TNIKQ9UKE5 1360 aa26.07■■□□□ 1.76
ZNF248-206ENST00000485560 SYNJ2O15056 1496 aa26■■□□□ 1.75
ZNF248-206ENST00000485560 CTTNBP2Q8WZ74 1663 aa25.95■■□□□ 1.75
ZNF248-206ENST00000485560 GRIN2AQ12879 1464 aa25.95■■□□□ 1.75
ZNF248-206ENST00000485560 CHMP7Q8WUX9 453 aaPredicted RBP25.94■■□□□ 1.74
ZNF248-206ENST00000485560 FBLN2P98095 1184 aa25.91■■□□□ 1.74
ZNF248-206ENST00000485560 CHD1O14646 1710 aa25.91■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 2132.9 ms