RNA–Protein interactions for RNA: ENST00000382191.4

TRA2B-203, Transcript of transformer 2 beta homolog, humanhuman

TSL 2 BASIC

Gene TRA2B, Length 976 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-203ENST00000382191 NISCHQ9Y2I1 1504 aa50.15■■■■■ 5.62
TRA2B-203ENST00000382191 CCDC180Q9P1Z9 1646 aa44.95■■■■■ 4.79
TRA2B-203ENST00000382191 ABCC9O60706 1549 aa44.65■■■■■ 4.74
TRA2B-203ENST00000382191 RB1CC1Q8TDY2 1594 aa42.66■■■■■ 4.42
TRA2B-203ENST00000382191 NACADO15069 1562 aa42.44■■■■■ 4.39
TRA2B-203ENST00000382191 DCAF8L2P0C7V8 631 aa42.08■■■■■ 4.33
TRA2B-203ENST00000382191 MYO15BQ96JP2 1530 aa41.99■■■■■ 4.31
TRA2B-203ENST00000382191 DNAJC5BQ9UF47 199 aa41.71■■■■■ 4.27
TRA2B-203ENST00000382191 UNC13AQ9UPW8 1703 aa41.67■■■■■ 4.26
TRA2B-203ENST00000382191 ZCCHC6Q5VYS8 1495 aaKnown RBP41.61■■■■■ 4.25
TRA2B-203ENST00000382191 PABPN1Q86U42 306 aaKnown RBP eCLIP41.57■■■■■ 4.25
TRA2B-203ENST00000382191 DCAF1Q9Y4B6 1507 aa41.5■■■■■ 4.23
TRA2B-203ENST00000382191 BICRAQ9NZM4 1560 aa41.42■■■■■ 4.22
TRA2B-203ENST00000382191 SHROOM4Q9ULL8 1493 aa40.96■■■■■ 4.15
TRA2B-203ENST00000382191 SCRIBQ14160 1630 aa40.88■■■■■ 4.13
TRA2B-203ENST00000382191 CC2D2AQ9P2K1 1620 aa40.38■■■■■ 4.06
TRA2B-203ENST00000382191 EIF4G1Q04637 1599 aaKnown RBP40.37■■■■■ 4.05
TRA2B-203ENST00000382191 CECR2Q9BXF3 1484 aa40.23■■■■■ 4.03
TRA2B-203ENST00000382191 NCAPD3P42695 1498 aa39.18■■■■□ 3.86
TRA2B-203ENST00000382191 SMARCA4P51532 1647 aa39.07■■■■□ 3.85
TRA2B-203ENST00000382191 ATAD2BQ9ULI0 1458 aa39.05■■■■□ 3.84
TRA2B-203ENST00000382191 SMARCA2P51531 1590 aa38.98■■■■□ 3.83
TRA2B-203ENST00000382191 BAZ1AQ9NRL2 1556 aaPredicted RBP38.92■■■■□ 3.82
TRA2B-203ENST00000382191 HMGXB3Q12766 1538 aa38.92■■■■□ 3.82
TRA2B-203ENST00000382191 PEG3Q9GZU2 1588 aa38.75■■■■□ 3.79
TRA2B-203ENST00000382191 BAZ1BQ9UIG0 1483 aaKnown RBP38.67■■■■□ 3.78
TRA2B-203ENST00000382191 MROH2BQ7Z745 1585 aa38.61■■■■□ 3.77
TRA2B-203ENST00000382191 ERCC6Q03468 1493 aa38.54■■■■□ 3.76
TRA2B-203ENST00000382191 CUX2O14529 1486 aa38.48■■■■□ 3.75
TRA2B-203ENST00000382191 NESP48681 1621 aa38.42■■■■□ 3.74
TRA2B-203ENST00000382191 LAMC3Q9Y6N6 1575 aa38.26■■■■□ 3.72
TRA2B-203ENST00000382191 DNAJC5Q9H3Z4 198 aa38.19■■■■□ 3.7
TRA2B-203ENST00000382191 WIZO95785 1651 aa38.14■■■■□ 3.7
TRA2B-203ENST00000382191 THOC2Q8NI27 1593 aaKnown RBP38.05■■■■□ 3.68
TRA2B-203ENST00000382191 PDS5BQ9NTI5 1447 aa38.01■■■■□ 3.68
TRA2B-203ENST00000382191 CADPSQ9ULU8 1353 aa37.96■■■■□ 3.67
TRA2B-203ENST00000382191 KIF21AQ7Z4S6 1674 aa37.95■■■■□ 3.67
TRA2B-203ENST00000382191 RSF1Q96T23 1441 aaPredicted RBP37.9■■■■□ 3.66
TRA2B-203ENST00000382191 TOP2AP11388 1531 aaKnown RBP37.72■■■■□ 3.63
TRA2B-203ENST00000382191 MRC2Q9UBG0 1479 aa37.67■■■■□ 3.62
TRA2B-203ENST00000382191 CFTRP13569 1480 aa37.6■■■■□ 3.61
TRA2B-203ENST00000382191 WDR62O43379 1518 aa37.59■■■■□ 3.61
TRA2B-203ENST00000382191 CEP164Q9UPV0 1460 aa37.55■■■■□ 3.6
TRA2B-203ENST00000382191 FANCD2Q9BXW9 1451 aa37.52■■■■□ 3.6
TRA2B-203ENST00000382191 CCDC88BA6NC98 1476 aa37.26■■■■□ 3.56
TRA2B-203ENST00000382191 PRDM2Q13029 1718 aa37.24■■■■□ 3.55
TRA2B-203ENST00000382191 URB2Q14146 1524 aaKnown RBP37.2■■■■□ 3.55
TRA2B-203ENST00000382191 TOPBP1Q92547 1522 aa36.84■■■■□ 3.49
TRA2B-203ENST00000382191 ABCC8Q09428 1581 aa36.82■■■■□ 3.48
TRA2B-203ENST00000382191 IFT140Q96RY7 1462 aa36.81■■■■□ 3.48
TRA2B-203ENST00000382191 DNMBPQ6XZF7 1577 aa36.74■■■■□ 3.47
TRA2B-203ENST00000382191 OSCARQ8IYS5 282 aa36.71■■■■□ 3.47
TRA2B-203ENST00000382191 ZNF608Q9ULD9 1512 aaPredicted RBP36.69■■■■□ 3.46
TRA2B-203ENST00000382191 EIF4G3O43432 1585 aaKnown RBP36.52■■■■□ 3.44
TRA2B-203ENST00000382191 TARBP1Q13395 1621 aaKnown RBP36.52■■■■□ 3.44
TRA2B-203ENST00000382191 TRIM41Q8WV44 630 aa36.49■■■■□ 3.43
TRA2B-203ENST00000382191 POLA1P09884 1462 aaPredicted RBP36.48■■■■□ 3.43
TRA2B-203ENST00000382191 AQRO60306 1485 aaKnown RBP eCLIP36.37■■■■□ 3.412e-7■■■■□ 20.5
TRA2B-203ENST00000382191 RAD54L2Q9Y4B4 1467 aa36.31■■■■□ 3.4
TRA2B-203ENST00000382191 SOGA1O94964 1423 aa36.3■■■■□ 3.4
TRA2B-203ENST00000382191 CUX1P39880 1505 aa36.28■■■■□ 3.4
TRA2B-203ENST00000382191 FGD5Q6ZNL6 1462 aa36.26■■■■□ 3.4
TRA2B-203ENST00000382191 SUPT5HO00267 1087 aaKnown RBP36.25■■■■□ 3.39
TRA2B-203ENST00000382191 WDR97A6NE52 1622 aa36.22■■■■□ 3.39
TRA2B-203ENST00000382191 RIMBP3CA6NJZ7 1639 aa36.21■■■■□ 3.39
TRA2B-203ENST00000382191 RIMBP3BA6NNM3 1639 aa36.21■■■■□ 3.39
TRA2B-203ENST00000382191 RIMBP3Q9UFD9 1639 aa36.21■■■■□ 3.39
TRA2B-203ENST00000382191 CHD1O14646 1710 aa36.2■■■■□ 3.38
TRA2B-203ENST00000382191 TDRD9Q8NDG6 1382 aaKnown RBP36.17■■■■□ 3.38
TRA2B-203ENST00000382191 ARHGEF11O15085 1522 aa36.13■■■■□ 3.37
TRA2B-203ENST00000382191 FBLN2P98095 1184 aa36.03■■■■□ 3.36
TRA2B-203ENST00000382191 SNAPC4Q5SXM2 1469 aa36.02■■■■□ 3.36
TRA2B-203ENST00000382191 GRIN2BQ13224 1484 aa35.99■■■■□ 3.35
TRA2B-203ENST00000382191 MAGI1Q96QZ7 1491 aaPredicted RBP35.99■■■■□ 3.35
TRA2B-203ENST00000382191 ABCA10Q8WWZ4 1543 aa35.9■■■■□ 3.34
TRA2B-203ENST00000382191 GAPVD1Q14C86 1478 aa35.87■■■■□ 3.33
TRA2B-203ENST00000382191 CHMP7Q8WUX9 453 aaPredicted RBP35.85■■■■□ 3.33
TRA2B-203ENST00000382191 SYNJ2O15056 1496 aa35.85■■■■□ 3.33
TRA2B-203ENST00000382191 PBRM1Q86U86 1689 aa35.84■■■■□ 3.33
TRA2B-203ENST00000382191 CLASP1Q7Z460 1538 aa35.83■■■■□ 3.33
TRA2B-203ENST00000382191 ABCA5Q8WWZ7 1642 aa35.83■■■■□ 3.33
TRA2B-203ENST00000382191 SYNJ1O43426 1573 aa35.81■■■■□ 3.32
TRA2B-203ENST00000382191 ARAP1Q96P48 1450 aa35.79■■■■□ 3.32
TRA2B-203ENST00000382191 CYB5RLQ6IPT4 315 aa35.78■■■■□ 3.32
TRA2B-203ENST00000382191 BIVM-ERCC5R4GMW8 1640 aa35.78■■■■□ 3.32
TRA2B-203ENST00000382191 WRNQ14191 1432 aaPredicted RBP eCLIP35.77■■■■□ 3.32
TRA2B-203ENST00000382191 TOP2BQ02880 1626 aa35.77■■■■□ 3.32
TRA2B-203ENST00000382191 ADAMTS12P58397 1594 aa35.53■■■■□ 3.28
TRA2B-203ENST00000382191 GRIN2AQ12879 1464 aa35.52■■■■□ 3.28
TRA2B-203ENST00000382191 ERICH3Q5RHP9 1530 aa35.47■■■■□ 3.27
TRA2B-203ENST00000382191 FHAD1B1AJZ9 1412 aa35.44■■■■□ 3.26
TRA2B-203ENST00000382191 NUP160Q12769 1436 aa35.42■■■■□ 3.26
TRA2B-203ENST00000382191 CEP170Q5SW79 1584 aa35.38■■■■□ 3.25
TRA2B-203ENST00000382191 TRHP20396 242 aaPredicted RBP35.3■■■■□ 3.24
TRA2B-203ENST00000382191 SHROOM2Q13796 1616 aa35.24■■■■□ 3.23
TRA2B-203ENST00000382191 ERCC6L2Q5T890 1561 aa35.23■■■■□ 3.23
TRA2B-203ENST00000382191 KIF27Q86VH2 1401 aa35.06■■■■□ 3.2
TRA2B-203ENST00000382191 IGF1RP08069 1367 aa35.02■■■■□ 3.2
TRA2B-203ENST00000382191 RUSC2Q8N2Y8 1516 aa35.02■■■■□ 3.2
TRA2B-203ENST00000382191 PRG4Q92954 1404 aaPredicted RBP35.01■■■■□ 3.2
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms