RNA–Protein interactions for RNA: ENST00000556895.5

LINC01578-207, Transcript of long intergenic non-protein coding RNA 1578, humanhuman

TSL 2 BASIC

Gene LINC01578, Length 802 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01578-207ENST00000556895 NISCHQ9Y2I1 1504 aa69.79■■■■■ 8.76
LINC01578-207ENST00000556895 CCDC180Q9P1Z9 1646 aa62.36■■■■■ 7.57
LINC01578-207ENST00000556895 ABCC9O60706 1549 aa61.52■■■■■ 7.44
LINC01578-207ENST00000556895 RB1CC1Q8TDY2 1594 aa58.93■■■■■ 7.02
LINC01578-207ENST00000556895 NACADO15069 1562 aa58.69■■■■■ 6.99
LINC01578-207ENST00000556895 DCAF8L2P0C7V8 631 aa58.46■■■■■ 6.95
LINC01578-207ENST00000556895 MYO15BQ96JP2 1530 aa58.12■■■■■ 6.9
LINC01578-207ENST00000556895 ZCCHC6Q5VYS8 1495 aaKnown RBP58.04■■■■■ 6.88
LINC01578-207ENST00000556895 UNC13AQ9UPW8 1703 aa57.7■■■■■ 6.83
LINC01578-207ENST00000556895 DCAF1Q9Y4B6 1507 aa57.69■■■■■ 6.83
LINC01578-207ENST00000556895 PABPN1Q86U42 306 aaKnown RBP eCLIP57.33■■■■■ 6.77
LINC01578-207ENST00000556895 BICRAQ9NZM4 1560 aa57.2■■■■■ 6.75
LINC01578-207ENST00000556895 DNAJC5BQ9UF47 199 aa56.93■■■■■ 6.7
LINC01578-207ENST00000556895 SCRIBQ14160 1630 aa56.88■■■■■ 6.7
LINC01578-207ENST00000556895 SHROOM4Q9ULL8 1493 aa56.47■■■■■ 6.63
LINC01578-207ENST00000556895 EIF4G1Q04637 1599 aaKnown RBP55.72■■■■■ 6.51
LINC01578-207ENST00000556895 CC2D2AQ9P2K1 1620 aa55.64■■■■■ 6.5
LINC01578-207ENST00000556895 CECR2Q9BXF3 1484 aa55.31■■■■■ 6.45
LINC01578-207ENST00000556895 SMARCA4P51532 1647 aa54.33■■■■■ 6.29
LINC01578-207ENST00000556895 BAZ1AQ9NRL2 1556 aaPredicted RBP54.13■■■■■ 6.26
LINC01578-207ENST00000556895 NCAPD3P42695 1498 aa54.12■■■■■ 6.25
LINC01578-207ENST00000556895 ATAD2BQ9ULI0 1458 aa54.1■■■■■ 6.25
LINC01578-207ENST00000556895 SMARCA2P51531 1590 aa54.03■■■■■ 6.24
LINC01578-207ENST00000556895 HMGXB3Q12766 1538 aa53.88■■■■■ 6.22
LINC01578-207ENST00000556895 MROH2BQ7Z745 1585 aa53.8■■■■■ 6.2
LINC01578-207ENST00000556895 PEG3Q9GZU2 1588 aa53.76■■■■■ 6.2
LINC01578-207ENST00000556895 BAZ1BQ9UIG0 1483 aaKnown RBP53.65■■■■■ 6.18
LINC01578-207ENST00000556895 WIZO95785 1651 aa53.25■■■■■ 6.11
LINC01578-207ENST00000556895 NESP48681 1621 aa53.09■■■■■ 6.09
LINC01578-207ENST00000556895 ERCC6Q03468 1493 aa53.06■■■■■ 6.08
LINC01578-207ENST00000556895 RSF1Q96T23 1441 aaPredicted RBP52.93■■■■■ 6.06
LINC01578-207ENST00000556895 LAMC3Q9Y6N6 1575 aa52.85■■■■■ 6.05
LINC01578-207ENST00000556895 CUX2O14529 1486 aa52.68■■■■■ 6.02
LINC01578-207ENST00000556895 TOP2AP11388 1531 aaKnown RBP52.61■■■■■ 6.01
LINC01578-207ENST00000556895 KIF21AQ7Z4S6 1674 aa52.52■■■■■ 6
LINC01578-207ENST00000556895 CADPSQ9ULU8 1353 aa52.51■■■■■ 6
LINC01578-207ENST00000556895 THOC2Q8NI27 1593 aaKnown RBP52.46■■■■■ 5.99
LINC01578-207ENST00000556895 PDS5BQ9NTI5 1447 aa52.45■■■■■ 5.99
LINC01578-207ENST00000556895 CFTRP13569 1480 aa52.12■■■■■ 5.93
LINC01578-207ENST00000556895 MRC2Q9UBG0 1479 aa52■■■■■ 5.92
LINC01578-207ENST00000556895 FANCD2Q9BXW9 1451 aa51.97■■■■■ 5.91
LINC01578-207ENST00000556895 CEP164Q9UPV0 1460 aa51.97■■■■■ 5.91
LINC01578-207ENST00000556895 CCDC88BA6NC98 1476 aa51.94■■■■■ 5.91
LINC01578-207ENST00000556895 WDR62O43379 1518 aa51.88■■■■■ 5.9
LINC01578-207ENST00000556895 PRDM2Q13029 1718 aa51.82■■■■■ 5.89
LINC01578-207ENST00000556895 DNAJC5Q9H3Z4 198 aa51.63■■■■■ 5.86
LINC01578-207ENST00000556895 URB2Q14146 1524 aaKnown RBP51.51■■■■■ 5.84
LINC01578-207ENST00000556895 SUPT5HO00267 1087 aaKnown RBP51.15■■■■■ 5.78
LINC01578-207ENST00000556895 TOPBP1Q92547 1522 aa51.08■■■■■ 5.77
LINC01578-207ENST00000556895 DNMBPQ6XZF7 1577 aa51■■■■■ 5.75
LINC01578-207ENST00000556895 ABCC8Q09428 1581 aa50.98■■■■■ 5.75
LINC01578-207ENST00000556895 IFT140Q96RY7 1462 aa50.87■■■■■ 5.73
LINC01578-207ENST00000556895 ZNF608Q9ULD9 1512 aaPredicted RBP50.73■■■■■ 5.71
LINC01578-207ENST00000556895 POLA1P09884 1462 aaPredicted RBP50.62■■■■■ 5.69
LINC01578-207ENST00000556895 TARBP1Q13395 1621 aaKnown RBP50.6■■■■■ 5.69
LINC01578-207ENST00000556895 EIF4G3O43432 1585 aaKnown RBP50.57■■■■■ 5.69
LINC01578-207ENST00000556895 CUX1P39880 1505 aa50.52■■■■■ 5.68
LINC01578-207ENST00000556895 FGD5Q6ZNL6 1462 aa50.43■■■■■ 5.66
LINC01578-207ENST00000556895 RAD54L2Q9Y4B4 1467 aa50.4■■■■■ 5.66
LINC01578-207ENST00000556895 AQRO60306 1485 aaKnown RBP eCLIP50.34■■■■■ 5.651e-8■■■■□ 19.4
LINC01578-207ENST00000556895 SOGA1O94964 1423 aa50.34■■■■■ 5.65
LINC01578-207ENST00000556895 OSCARQ8IYS5 282 aa50.3■■■■■ 5.64
LINC01578-207ENST00000556895 WDR97A6NE52 1622 aa50.14■■■■■ 5.62
LINC01578-207ENST00000556895 TDRD9Q8NDG6 1382 aaKnown RBP50.14■■■■■ 5.62
LINC01578-207ENST00000556895 CHD1O14646 1710 aa50.07■■■■■ 5.61
LINC01578-207ENST00000556895 BIVM-ERCC5R4GMW8 1640 aa49.97■■■■■ 5.59
LINC01578-207ENST00000556895 WRNQ14191 1432 aaPredicted RBP eCLIP49.94■■■■■ 5.58
LINC01578-207ENST00000556895 TOP2BQ02880 1626 aa49.93■■■■■ 5.58
LINC01578-207ENST00000556895 SYNJ1O43426 1573 aa49.92■■■■■ 5.58
LINC01578-207ENST00000556895 SNAPC4Q5SXM2 1469 aa49.91■■■■■ 5.58
LINC01578-207ENST00000556895 ABCA10Q8WWZ4 1543 aa49.88■■■■■ 5.58
LINC01578-207ENST00000556895 GRIN2BQ13224 1484 aa49.85■■■■■ 5.57
LINC01578-207ENST00000556895 PBRM1Q86U86 1689 aa49.84■■■■■ 5.57
LINC01578-207ENST00000556895 FBLN2P98095 1184 aa49.81■■■■■ 5.56
LINC01578-207ENST00000556895 ABCA5Q8WWZ7 1642 aa49.8■■■■■ 5.56
LINC01578-207ENST00000556895 GAPVD1Q14C86 1478 aa49.78■■■■■ 5.56
LINC01578-207ENST00000556895 MAGI1Q96QZ7 1491 aaPredicted RBP49.78■■■■■ 5.56
LINC01578-207ENST00000556895 TRIM41Q8WV44 630 aa49.76■■■■■ 5.56
LINC01578-207ENST00000556895 RIMBP3CA6NJZ7 1639 aa49.73■■■■■ 5.55
LINC01578-207ENST00000556895 RIMBP3BA6NNM3 1639 aa49.73■■■■■ 5.55
LINC01578-207ENST00000556895 RIMBP3Q9UFD9 1639 aa49.73■■■■■ 5.55
LINC01578-207ENST00000556895 ARHGEF11O15085 1522 aa49.62■■■■■ 5.53
LINC01578-207ENST00000556895 SYNJ2O15056 1496 aa49.6■■■■■ 5.53
LINC01578-207ENST00000556895 CHMP7Q8WUX9 453 aaPredicted RBP49.56■■■■■ 5.52
LINC01578-207ENST00000556895 CLASP1Q7Z460 1538 aa49.45■■■■■ 5.51
LINC01578-207ENST00000556895 ADAMTS12P58397 1594 aa49.37■■■■■ 5.49
LINC01578-207ENST00000556895 ERICH3Q5RHP9 1530 aa49.28■■■■■ 5.48
LINC01578-207ENST00000556895 GRIN2AQ12879 1464 aa49.23■■■■■ 5.47
LINC01578-207ENST00000556895 ARAP1Q96P48 1450 aa49.18■■■■■ 5.46
LINC01578-207ENST00000556895 FHAD1B1AJZ9 1412 aa49.17■■■■■ 5.46
LINC01578-207ENST00000556895 CYB5RLQ6IPT4 315 aa49.1■■■■■ 5.45
LINC01578-207ENST00000556895 CEP170Q5SW79 1584 aa49.07■■■■■ 5.45
LINC01578-207ENST00000556895 NUP160Q12769 1436 aa49.01■■■■■ 5.44
LINC01578-207ENST00000556895 KIF27Q86VH2 1401 aa48.92■■■■■ 5.42
LINC01578-207ENST00000556895 CUL7Q14999 1698 aa48.78■■■■■ 5.4
LINC01578-207ENST00000556895 SHROOM2Q13796 1616 aa48.77■■■■■ 5.4
LINC01578-207ENST00000556895 ERCC6L2Q5T890 1561 aa48.75■■■■■ 5.39
LINC01578-207ENST00000556895 IGF1RP08069 1367 aa48.75■■■■■ 5.39
LINC01578-207ENST00000556895 RUSC2Q8N2Y8 1516 aa48.67■■■■■ 5.38
LINC01578-207ENST00000556895 CARMIL1Q5VZK9 1371 aa48.47■■■■■ 5.35
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms