RNA–Protein interactions for RNA: ENST00000409798.5

NUP35-203, Transcript of nucleoporin 35, humanhuman

TSL 2 BASIC

Gene NUP35, Length 1,470 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP35-203ENST00000409798 AEBP2Q6ZN18 517 aaPredicted RBP18.64■□□□□ 0.57
NUP35-203ENST00000409798 CHIC1Q5VXU3 224 aa17.55■□□□□ 0.4
NUP35-203ENST00000409798 SENP3Q9H4L4 574 aaPredicted RBP15.97■□□□□ 0.15
NUP35-203ENST00000409798 PHF23Q9BUL5 403 aaPredicted RBP15.72■□□□□ 0.11
NUP35-203ENST00000409798 POTEDQ86YR6 584 aa15.4■□□□□ 0.06
NUP35-203ENST00000409798 FOXD1Q16676 465 aa14.91□□□□□ -0.02
NUP35-203ENST00000409798 PLPPR3Q6T4P5 718 aa14.31□□□□□ -0.12
NUP35-203ENST00000409798 MSH5O43196 834 aa14.08□□□□□ -0.16
NUP35-203ENST00000409798 PIAS4Q8N2W9 510 aaPredicted RBP13.87□□□□□ -0.19
NUP35-203ENST00000409798 PPP6R1Q9UPN7 881 aa13.72□□□□□ -0.21
NUP35-203ENST00000409798 ADRA2BP18089 450 aa13.66□□□□□ -0.22
NUP35-203ENST00000409798 CACNB1Q02641 598 aaPredicted RBP12.65□□□□□ -0.38
NUP35-203ENST00000409798 MAPK8IP2Q13387 824 aaPredicted RBP12.65□□□□□ -0.38
NUP35-203ENST00000409798 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
NUP35-203ENST00000409798 PPP4R3CPQ6ZMV5 832 aa12.58□□□□□ -0.4
NUP35-203ENST00000409798 SCAF1Q9H7N4 1312 aaKnown RBP12.53□□□□□ -0.4
NUP35-203ENST00000409798 KCNA4P22459 653 aa12.33□□□□□ -0.44
NUP35-203ENST00000409798 NCBP3Q53F19 620 aaKnown RBP12.32□□□□□ -0.44
NUP35-203ENST00000409798 CNKSR2Q8WXI2 1034 aa12.24□□□□□ -0.45
NUP35-203ENST00000409798 DCAF8L1A6NGE4 600 aa12.14□□□□□ -0.47
NUP35-203ENST00000409798 NPM3O75607 178 aaKnown RBP12.08□□□□□ -0.47
NUP35-203ENST00000409798 HOXD11P31277 338 aaPredicted RBP12.02□□□□□ -0.49
NUP35-203ENST00000409798 RNF216Q9NWF9 866 aaPredicted RBP12□□□□□ -0.49
NUP35-203ENST00000409798 RNF39Q9H2S5 420 aa11.97□□□□□ -0.49
NUP35-203ENST00000409798 POTEHQ6S545 545 aa11.88□□□□□ -0.51
NUP35-203ENST00000409798 DNAJC5BQ9UF47 199 aa11.81□□□□□ -0.52
NUP35-203ENST00000409798 C1QBPQ07021 282 aaKnown RBP11.8□□□□□ -0.52
NUP35-203ENST00000409798 SLC4A1APQ9BWU0 796 aaKnown RBP11.78□□□□□ -0.52
NUP35-203ENST00000409798 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.49□□□□□ -0.57
NUP35-203ENST00000409798 EHMT2Q96KQ7 1210 aa11.48□□□□□ -0.57
NUP35-203ENST00000409798 SLC4A2P04920 1241 aa11.38□□□□□ -0.59
NUP35-203ENST00000409798 FOXD4L1Q9NU39 408 aa11.38□□□□□ -0.59
NUP35-203ENST00000409798 ZBTB22O15209 634 aa11.33□□□□□ -0.6
NUP35-203ENST00000409798 CSRNP3Q8WYN3 585 aa11.33□□□□□ -0.6
NUP35-203ENST00000409798 MYCNP04198 464 aaPredicted RBP11.19□□□□□ -0.62
NUP35-203ENST00000409798 U3KPZ7 1027 aaPredicted RBP11.18□□□□□ -0.62
NUP35-203ENST00000409798 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.12□□□□□ -0.63
NUP35-203ENST00000409798 CAPN15O75808 1086 aa11.12□□□□□ -0.63
NUP35-203ENST00000409798 HNRNPUL2Q1KMD3 747 aaKnown RBP11.12□□□□□ -0.63
NUP35-203ENST00000409798 DSG3P32926 999 aa11.12□□□□□ -0.63
NUP35-203ENST00000409798 SPINK5Q9NQ38 1064 aaPredicted RBP11.12□□□□□ -0.63
NUP35-203ENST00000409798 SAMD1Q6SPF0 538 aaPredicted RBP11.06□□□□□ -0.64
NUP35-203ENST00000409798 ATXN8OSP0DMR3 200 aa11.01□□□□□ -0.65
NUP35-203ENST00000409798 APLP2Q06481 763 aa11□□□□□ -0.65
NUP35-203ENST00000409798 TRHP20396 242 aaPredicted RBP10.88□□□□□ -0.67
NUP35-203ENST00000409798 ABCB7O75027 752 aa10.83□□□□□ -0.68
NUP35-203ENST00000409798 ZNF219Q9P2Y4 722 aaPredicted RBP10.83□□□□□ -0.68
NUP35-203ENST00000409798 ATF5Q9Y2D1 282 aaPredicted RBP10.81□□□□□ -0.68
NUP35-203ENST00000409798 SP7Q8TDD2 431 aaPredicted RBP10.62□□□□□ -0.71
NUP35-203ENST00000409798 RBM42Q9BTD8 480 aaKnown RBP10.62□□□□□ -0.71
NUP35-203ENST00000409798 POLA2Q14181 598 aa10.59□□□□□ -0.71
NUP35-203ENST00000409798 CHRDL2Q6WN34 429 aa10.51□□□□□ -0.73
NUP35-203ENST00000409798 ZBTB12Q9Y330 459 aaPredicted RBP10.49□□□□□ -0.73
NUP35-203ENST00000409798 FBLN2P98095 1184 aa10.45□□□□□ -0.74
NUP35-203ENST00000409798 MKRN4PQ13434 485 aaPredicted RBP10.37□□□□□ -0.75
NUP35-203ENST00000409798 PLSCR2Q9NRY7 297 aa10.32□□□□□ -0.76
NUP35-203ENST00000409798 AKT1S1Q96B36 256 aa10.31□□□□□ -0.76
NUP35-203ENST00000409798 FKBP8Q14318 412 aa10.25□□□□□ -0.77
NUP35-203ENST00000409798 REM2Q8IYK8 340 aaPredicted RBP10.23□□□□□ -0.77
NUP35-203ENST00000409798 OSCARQ8IYS5 282 aa10.23□□□□□ -0.77
NUP35-203ENST00000409798 SPDYE4A6NLX3 237 aa10.2□□□□□ -0.78
NUP35-203ENST00000409798 SPDYE2BA6NHP3 402 aa10.19□□□□□ -0.78
NUP35-203ENST00000409798 SPDYE6P0CI01 402 aa10.19□□□□□ -0.78
NUP35-203ENST00000409798 SPDYE2Q495Y8 402 aa10.19□□□□□ -0.78
NUP35-203ENST00000409798 PIP4P2Q8N4L2 257 aa10.19□□□□□ -0.78
NUP35-203ENST00000409798 HAX1O00165 279 aa10.12□□□□□ -0.79
NUP35-203ENST00000409798 ZNF692Q9BU19 519 aaPredicted RBP10.12□□□□□ -0.79
NUP35-203ENST00000409798 PITPNM1O00562 1244 aa10.1□□□□□ -0.79
NUP35-203ENST00000409798 SSUH2Q9Y2M2 353 aa10.1□□□□□ -0.79
NUP35-203ENST00000409798 FXR2P51116 673 aaKnown RBP eCLIP10.08□□□□□ -0.8
NUP35-203ENST00000409798 PROM2Q8N271 834 aa10.06□□□□□ -0.8
NUP35-203ENST00000409798 PABPN1Q86U42 306 aaKnown RBP eCLIP9.98□□□□□ -0.81
NUP35-203ENST00000409798 LHX8Q68G74 356 aa9.97□□□□□ -0.81
NUP35-203ENST00000409798 EVX2Q03828 476 aa9.95□□□□□ -0.82
NUP35-203ENST00000409798 FBXO3Q9UK99 471 aa9.94□□□□□ -0.82
NUP35-203ENST00000409798 STAG3Q9UJ98 1225 aa9.89□□□□□ -0.83
NUP35-203ENST00000409798 SPDYE1Q8NFV5 336 aaPredicted RBP9.87□□□□□ -0.83
NUP35-203ENST00000409798 AMER1Q5JTC6 1135 aaPredicted RBP9.86□□□□□ -0.83
NUP35-203ENST00000409798 PRKAR2AP13861 404 aaKnown RBP9.85□□□□□ -0.83
NUP35-203ENST00000409798 CLEC11AQ9Y240 323 aa9.85□□□□□ -0.83
NUP35-203ENST00000409798 RTN4Q9NQC3 1192 aaKnown RBP9.84□□□□□ -0.83
NUP35-203ENST00000409798 SLC24A1O60721 1099 aa9.78□□□□□ -0.84
NUP35-203ENST00000409798 C19orf67A6NJJ6 358 aa9.77□□□□□ -0.85
NUP35-203ENST00000409798 VASPP50552 380 aaPredicted RBP9.76□□□□□ -0.85
NUP35-203ENST00000409798 PRR29P0C7W0 189 aa9.72□□□□□ -0.85
NUP35-203ENST00000409798 GABBR2O75899 941 aa9.71□□□□□ -0.86
NUP35-203ENST00000409798 CHADLQ6NUI6 762 aa9.67□□□□□ -0.86
NUP35-203ENST00000409798 PLEKHG5O94827 1062 aa9.66□□□□□ -0.86
NUP35-203ENST00000409798 MIER1Q8N108 512 aa9.66□□□□□ -0.86
NUP35-203ENST00000409798 PLCD3Q8N3E9 789 aa9.66□□□□□ -0.86
NUP35-203ENST00000409798 ZBTB47Q9UFB7 747 aaPredicted RBP9.62□□□□□ -0.87
NUP35-203ENST00000409798 IFNLR1Q8IU57 520 aaPredicted RBP9.6□□□□□ -0.87
NUP35-203ENST00000409798 CREBZFQ9NS37 354 aa9.59□□□□□ -0.87
NUP35-203ENST00000409798 KLHL34Q8N239 644 aa9.56□□□□□ -0.88
NUP35-203ENST00000409798 CD44P16070 742 aaKnown RBP9.52□□□□□ -0.89
NUP35-203ENST00000409798 SPOCK2Q92563 424 aa9.51□□□□□ -0.89
NUP35-203ENST00000409798 FARP1Q9Y4F1 1045 aaPredicted RBP9.51□□□□□ -0.89
NUP35-203ENST00000409798 MNX1P50219 401 aaPredicted RBP9.5□□□□□ -0.89
NUP35-203ENST00000409798 NPM1P06748 294 aaKnown RBP eCLIP9.48□□□□□ -0.89
NUP35-203ENST00000409798 POTEIP0CG38 1075 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 88.8 ms